RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	TOM71	P38825	639 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	FLO5	P38894	1075 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	SCS2	P40075	244 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	HIS6	P40545	261 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	QRI7	P43122	407 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	LYS20	P48570	428 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	IMD3	P50095	523 aa	Known RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	COG2	P53271	262 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	SOL4	P53315	255 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	YNR071C	P53757	342 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	TEP1	P53916	434 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	SNA4	Q07549	140 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	DIN7	Q12086	430 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	RTK1	Q12100	620 aa	Predicted RBP	3.31	□□□□□ -1.88
ATG3	YNR007C	YOL114C	Q12322	202 aa		3.31	□□□□□ -1.88
ATG3	YNR007C	CHO2	P05374	869 aa	Known RBP	3.3	□□□□□ -1.88
ATG3	YNR007C	MSS18	P08593	268 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	PGI1	P12709	554 aa	Known RBP	3.3	□□□□□ -1.88
ATG3	YNR007C	VMA2	P16140	517 aa	Known RBP	3.3	□□□□□ -1.88
ATG3	YNR007C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.3	□□□□□ -1.88	not detected
ATG3	YNR007C	PHO81	P17442	1178 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	SWC3	P31376	625 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	SWD1	P39706	426 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	ACA1	P39970	489 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	YAT2	P40017	923 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	CIN1	P40987	1014 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	MAF1	P41910	395 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	MDV1	P47025	714 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	CEG1	Q01159	459 aa	Predicted RBP	3.3	□□□□□ -1.88
ATG3	YNR007C	INM2	Q05533	292 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	BRE1	Q07457	700 aa	Known RBP	3.3	□□□□□ -1.88
ATG3	YNR007C	CRD1	Q07560	283 aa		3.3	□□□□□ -1.88
ATG3	YNR007C	PDR18	P53756	1333 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	TY1B-A	O13527	1196 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	URA3	P03962	267 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	ADH4	P10127	382 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	SNF3	P10870	884 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	PRE8	P23639	250 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	RPT3	P33298	428 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	KES1	P35844	434 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	YHL041W	P38730	149 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	KEL1	P38853	1164 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	MTG2	P38860	518 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	YIR016W	P40572	265 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	COS12	P53053	380 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	YGL242C	P53066	181 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	BOP3	P53958	396 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	EIS1	Q05050	843 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	PSR2	Q07949	397 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	KEL3	Q08979	651 aa	Predicted RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	ATX2	Q12067	313 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	DBP10	Q12389	995 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	RVB2	Q12464	471 aa	Known RBP	3.29	□□□□□ -1.88
ATG3	YNR007C	YOR111W	Q99210	232 aa		3.29	□□□□□ -1.88
ATG3	YNR007C	FLO11	P08640	1367 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	OPI1	P21957	404 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	AMD2	P22580	549 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	ARG1	P22768	420 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	MSH1	P25846	959 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	RTS1	P38903	757 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	LSB1	P53281	241 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	VTC3	Q02725	835 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	ATG16	Q03818	150 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	MRD1	Q06106	887 aa	Known RBP	3.28	□□□□□ -1.88
ATG3	YNR007C	ECM30	Q06673	1274 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	AAD4	Q07747	329 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	GET3	Q12154	354 aa	Known RBP	3.28	□□□□□ -1.88
ATG3	YNR007C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.28	□□□□□ -1.88	not detected
ATG3	YNR007C	UBX3	Q12229	455 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	LCB4	Q12246	624 aa		3.28	□□□□□ -1.88
ATG3	YNR007C	RRP43	P25359	394 aa	Predicted RBP	3.27	□□□□□ -1.89
ATG3	YNR007C	MRS6	P32864	603 aa	Known RBP	3.27	□□□□□ -1.89
ATG3	YNR007C	APM3	P38153	483 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	IES5	P40060	125 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	IMA5	P40884	581 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	YML119W	Q03208	357 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	PLM2	Q04383	521 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	RAD34	Q06665	692 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	NDD1	Q08887	554 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	YOR389W	Q08912	624 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	LYS21	Q12122	440 aa	Known RBP	3.27	□□□□□ -1.89
ATG3	YNR007C	Q0010	Q9ZZX9	128 aa		3.27	□□□□□ -1.89
ATG3	YNR007C	MIS1	P09440	975 aa	Known RBP	3.26	□□□□□ -1.89
ATG3	YNR007C	SNA3	P14359	133 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	SIR1	P21691	654 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	MCM4	P30665	933 aa	Known RBP	3.26	□□□□□ -1.89
ATG3	YNR007C	BUD2	P33314	1104 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	GND1	P38720	489 aa	Known RBP	3.26	□□□□□ -1.89
ATG3	YNR007C	VPS8	P39702	1274 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	VFA1	P40080	203 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	YIL152W	P40455	235 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	FAF1	P40546	346 aa	Predicted RBP	3.26	□□□□□ -1.89
ATG3	YNR007C	MAD3	P47074	515 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	YGR021W	P53212	290 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	CPR6	P53691	371 aa	Known RBP	3.26	□□□□□ -1.89
ATG3	YNR007C	SKG3	Q06315	1026 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	IWR1	Q07532	353 aa	Predicted RBP	3.26	□□□□□ -1.89
ATG3	YNR007C	TAH18	Q12181	623 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	RAD61	Q99359	647 aa		3.26	□□□□□ -1.89
ATG3	YNR007C	GAL4	P04386	881 aa		3.25	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms