RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W RSC1P53236 928 aa3.64□□□□□ -1.83
UBP8YMR223W UBX4P54730 416 aa3.64□□□□□ -1.83
UBP8YMR223W VIP1Q06685 1146 aaKnown RBP3.64□□□□□ -1.83
UBP8YMR223W IWR1Q07532 353 aaPredicted RBP3.64□□□□□ -1.83
UBP8YMR223W BSC1Q12140 328 aa3.64□□□□□ -1.83
UBP8YMR223W APA1P16550 321 aaKnown RBP3.63□□□□□ -1.83
UBP8YMR223W RTS2P40962 232 aa3.63□□□□□ -1.83
UBP8YMR223W TAM41P53230 385 aa3.63□□□□□ -1.83
UBP8YMR223W PSR2Q07949 397 aa3.63□□□□□ -1.83
UBP8YMR223W PPT2Q12036 173 aa3.63□□□□□ -1.83
UBP8YMR223W RIT1P23796 513 aa3.62□□□□□ -1.83
UBP8YMR223W GPI8P49018 411 aa3.62□□□□□ -1.83
UBP8YMR223W PFA5Q03289 374 aa3.62□□□□□ -1.83
UBP8YMR223W EKI1Q03764 534 aa3.62□□□□□ -1.83
UBP8YMR223W IMH1Q06704 911 aaKnown RBP3.62□□□□□ -1.83
UBP8YMR223W CHO1P08456 276 aa3.61□□□□□ -1.83
UBP8YMR223W HSC82P15108 705 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W POL3P15436 1097 aa3.61□□□□□ -1.83
UBP8YMR223W PDA1P16387 420 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W TKL1P23254 680 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W GFD2P25370 566 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W SSH4P32343 579 aa3.61□□□□□ -1.83
UBP8YMR223W SAC1P32368 623 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W MRX1P40050 688 aa3.61□□□□□ -1.83
UBP8YMR223W RPN11P43588 306 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W MET14Q02196 202 aa3.61□□□□□ -1.83
UBP8YMR223W YDR415CQ04033 374 aaPredicted RBP3.61□□□□□ -1.83
UBP8YMR223W SXM1Q04175 944 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W SWA2Q06677 668 aa3.61□□□□□ -1.83
UBP8YMR223W TLG2Q08144 397 aa3.61□□□□□ -1.83
UBP8YMR223W GAL1P04385 528 aa3.61□□□□□ -1.83
UBP8YMR223W CDC31P06704 161 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W ADE3P07245 946 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W KRS1P15180 591 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W SRP54P20424 541 aaKnown RBP3.61□□□□□ -1.83
UBP8YMR223W BUD14P27637 709 aa3.61□□□□□ -1.83
UBP8YMR223W LHS1P36016 881 aa3.61□□□□□ -1.83
UBP8YMR223W JNM1P36224 373 aa3.61□□□□□ -1.83
UBP8YMR223W UBP13P38187 747 aa3.61□□□□□ -1.83
UBP8YMR223W SGF73P53165 657 aa3.61□□□□□ -1.83
UBP8YMR223W SWT1Q12104 458 aa3.61□□□□□ -1.83
UBP8YMR223W RTP1Q12751 981 aa3.61□□□□□ -1.83
UBP8YMR223W MIS1P09440 975 aaKnown RBP3.6□□□□□ -1.83
UBP8YMR223W CBS2P14905 389 aa3.6□□□□□ -1.83
UBP8YMR223W CLB2P24869 491 aa3.6□□□□□ -1.83
UBP8YMR223W GID7P25569 745 aa3.6□□□□□ -1.83
UBP8YMR223W ARP2P32381 391 aaKnown RBP3.6□□□□□ -1.83
UBP8YMR223W MRS6P32864 603 aaKnown RBP3.6□□□□□ -1.83
UBP8YMR223W FSH1P38777 243 aaKnown RBP3.6□□□□□ -1.83
UBP8YMR223W APE4P38821 490 aa3.6□□□□□ -1.83
UBP8YMR223W YHR218WP38899 603 aa3.6□□□□□ -1.83
UBP8YMR223W KRE9P39005 276 aa3.6□□□□□ -1.83
UBP8YMR223W RGI2P40188 164 aa3.6□□□□□ -1.83
UBP8YMR223W ESL1P40456 1118 aa3.6□□□□□ -1.83
UBP8YMR223W HXT9P40885 567 aa3.6□□□□□ -1.83
UBP8YMR223W DIM1P41819 318 aaKnown RBP3.6□□□□□ -1.83
UBP8YMR223W YML131WQ03102 365 aa3.6□□□□□ -1.83
UBP8YMR223W NAT1P12945 854 aaKnown RBP3.59□□□□□ -1.84
UBP8YMR223W SPO16P17122 198 aa3.59□□□□□ -1.84
UBP8YMR223W GLN3P18494 730 aa3.59□□□□□ -1.84
UBP8YMR223W BRF1P29056 596 aa3.59□□□□□ -1.84
UBP8YMR223W RXT2P38255 430 aa3.59□□□□□ -1.84
UBP8YMR223W CTK2P46962 323 aa3.59□□□□□ -1.84
UBP8YMR223W TEP1P53916 434 aa3.59□□□□□ -1.84
UBP8YMR223W MAK10Q02197 733 aa3.59□□□□□ -1.84
UBP8YMR223W YDR056CQ12025 205 aa3.59□□□□□ -1.84
UBP8YMR223W YOL114CQ12322 202 aa3.59□□□□□ -1.84
UBP8YMR223W RAP1P11938 827 aa3.58□□□□□ -1.84
UBP8YMR223W RPB8P20436 146 aa3.58□□□□□ -1.84
UBP8YMR223W MSM1P22438 575 aa3.58□□□□□ -1.84
UBP8YMR223W DBF20P32328 564 aa3.58□□□□□ -1.84
UBP8YMR223W MCM10P32354 571 aa3.58□□□□□ -1.84
UBP8YMR223W ANP1P32629 500 aa3.58□□□□□ -1.84
UBP8YMR223W GEX2P36173 615 aa3.58□□□□□ -1.84
UBP8YMR223W AAP1P37898 856 aaKnown RBP3.58□□□□□ -1.84
UBP8YMR223W FET5P43561 622 aa3.58□□□□□ -1.84
UBP8YMR223W VTC2P43585 828 aa3.58□□□□□ -1.84
UBP8YMR223W YGR016WP53209 190 aa3.58□□□□□ -1.84
UBP8YMR223W VTI1Q04338 217 aa3.58□□□□□ -1.84
UBP8YMR223W HSP42Q12329 375 aa3.58□□□□□ -1.84
UBP8YMR223W PET111P08468 800 aa3.57□□□□□ -1.84
UBP8YMR223W REV1P12689 985 aa3.57□□□□□ -1.84
UBP8YMR223W SOF1P33750 489 aaKnown RBP3.57□□□□□ -1.84
UBP8YMR223W MIC60P36112 540 aa3.57□□□□□ -1.84
UBP8YMR223W APM3P38153 483 aa3.57□□□□□ -1.84
UBP8YMR223W SEC31P38968 1273 aaKnown RBP3.57□□□□□ -1.84
UBP8YMR223W SAP185P40856 1058 aa3.57□□□□□ -1.84
UBP8YMR223W SRB7P47822 140 aa3.57□□□□□ -1.84
UBP8YMR223W SHE10P53075 577 aa3.57□□□□□ -1.84
UBP8YMR223W CPR6P53691 371 aaKnown RBP3.57□□□□□ -1.84
UBP8YMR223W YDR341CQ05506 607 aaKnown RBP3.57□□□□□ -1.84
UBP8YMR223W CDC45Q08032 650 aa3.57□□□□□ -1.84
UBP8YMR223W SSP2Q08646 371 aa3.57□□□□□ -1.84
UBP8YMR223W MED1Q12321 566 aa3.57□□□□□ -1.84
UBP8YMR223W CSR2Q12734 1121 aa3.57□□□□□ -1.84
UBP8YMR223W EDE1P34216 1381 aa3.57□□□□□ -1.84
UBP8YMR223W SWI4P25302 1093 aaKnown RBP3.56□□□□□ -1.84
UBP8YMR223W PTP2P29461 750 aa3.56□□□□□ -1.84
UBP8YMR223W DPH2P32461 534 aa3.56□□□□□ -1.84
UBP8YMR223W RRN3P36070 627 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms