RNA–Protein interactions for RNA: YLR420W

URA4, Transcript of Dihydroorotase, yeast

Gene URA4, Length 1,095 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA4	YLR420W	ARN1	P38731	627 aa		4.59	□□□□□ -1.67
URA4	YLR420W	PUG1	P40100	303 aa		4.59	□□□□□ -1.67
URA4	YLR420W	PSF2	P40359	213 aa		4.59	□□□□□ -1.67
URA4	YLR420W	YIL161W	P40449	235 aa	Known RBP	4.59	□□□□□ -1.67
URA4	YLR420W	DJP1	P40564	432 aa		4.59	□□□□□ -1.67
URA4	YLR420W	YJR008W	P47085	338 aa		4.59	□□□□□ -1.67
URA4	YLR420W	VTC3	Q02725	835 aa		4.59	□□□□□ -1.67
URA4	YLR420W	YPL068C	Q02749	293 aa		4.59	□□□□□ -1.67
URA4	YLR420W	PDR8	Q06149	701 aa		4.59	□□□□□ -1.67
URA4	YLR420W	ATG23	Q06671	453 aa		4.59	□□□□□ -1.67
URA4	YLR420W	RIX7	Q07844	837 aa	Known RBP	4.59	□□□□□ -1.67
URA4	YLR420W	LPD1	P09624	499 aa	Known RBP	4.58	□□□□□ -1.68
URA4	YLR420W	RAD24	P32641	659 aa		4.58	□□□□□ -1.68
URA4	YLR420W	NUP133	P36161	1157 aa		4.58	□□□□□ -1.68
URA4	YLR420W	MDV1	P47025	714 aa		4.58	□□□□□ -1.68
URA4	YLR420W	VPS25	P47142	202 aa		4.58	□□□□□ -1.68
URA4	YLR420W	YPT11	P48559	417 aa		4.58	□□□□□ -1.68
URA4	YLR420W	YPR003C	P53394	754 aa		4.58	□□□□□ -1.68
URA4	YLR420W	CSI1	Q04368	295 aa		4.58	□□□□□ -1.68
URA4	YLR420W	STP3	Q05937	343 aa		4.58	□□□□□ -1.68
URA4	YLR420W	ATX2	Q12067	313 aa		4.58	□□□□□ -1.68
URA4	YLR420W	BAG7	Q12128	409 aa		4.58	□□□□□ -1.68
URA4	YLR420W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
URA4	YLR420W	GAL4	P04386	881 aa		4.57	□□□□□ -1.68
URA4	YLR420W	RPS19A	P07280	144 aa	Known RBP	4.57	□□□□□ -1.68
URA4	YLR420W	RPS19B	P07281	144 aa	Predicted RBP	4.57	□□□□□ -1.68
URA4	YLR420W	NUC1	P08466	329 aa		4.57	□□□□□ -1.68
URA4	YLR420W	CNA1	P23287	553 aa		4.57	□□□□□ -1.68
URA4	YLR420W	YCR006C	P25350	157 aa		4.57	□□□□□ -1.68
URA4	YLR420W	TOM71	P38825	639 aa	Known RBP	4.57	□□□□□ -1.68
URA4	YLR420W	UBP7	P40453	1071 aa		4.57	□□□□□ -1.68
URA4	YLR420W	ASG1	P40467	964 aa		4.57	□□□□□ -1.68
URA4	YLR420W	IRC8	P47046	822 aa		4.57	□□□□□ -1.68
URA4	YLR420W	FCP1	Q03254	732 aa		4.57	□□□□□ -1.68
URA4	YLR420W	SWT1	Q12104	458 aa		4.57	□□□□□ -1.68
URA4	YLR420W	YLR049C	Q12110	428 aa		4.57	□□□□□ -1.68
URA4	YLR420W	YER190C-B	P0CX94	160 aa		4.56	□□□□□ -1.68
URA4	YLR420W	YEL077W-A	P0CX95	160 aa		4.56	□□□□□ -1.68
URA4	YLR420W	YGR296C-B	P0CX96	160 aa		4.56	□□□□□ -1.68
URA4	YLR420W	YPL283W-B	P0CX97	160 aa		4.56	□□□□□ -1.68
URA4	YLR420W	YPR204C-A	P0CX98	160 aa		4.56	□□□□□ -1.68
URA4	YLR420W	MRP2	P10663	115 aa	Predicted RBP	4.56	□□□□□ -1.68
URA4	YLR420W	BIK1	P11709	440 aa		4.56	□□□□□ -1.68
URA4	YLR420W	RFA2	P26754	273 aa	Known RBP	4.56	□□□□□ -1.68
URA4	YLR420W	OCT1	P35999	772 aa		4.56	□□□□□ -1.68
URA4	YLR420W	ERR3	P42222	437 aa		4.56	□□□□□ -1.68
URA4	YLR420W	UBP8	P50102	471 aa		4.56	□□□□□ -1.68
URA4	YLR420W	DCP2	P53550	970 aa	Known RBP	4.56	□□□□□ -1.68
URA4	YLR420W	BOP3	P53958	396 aa		4.56	□□□□□ -1.68
URA4	YLR420W	RPL15B	P54780	204 aa	Predicted RBP	4.56	□□□□□ -1.68
URA4	YLR420W	MCH4	Q08268	501 aa		4.56	□□□□□ -1.68
URA4	YLR420W	UTP10	P42945	1769 aa	Known RBP	4.55	□□□□□ -1.68
URA4	YLR420W	SSK22	P25390	1331 aa	Predicted RBP	4.55	□□□□□ -1.68
URA4	YLR420W	ATP2	P00830	511 aa	Known RBP	4.55	□□□□□ -1.68
URA4	YLR420W	SPO16	P17122	198 aa		4.55	□□□□□ -1.68
URA4	YLR420W	AIM17	P23180	465 aa	Known RBP	4.55	□□□□□ -1.68
URA4	YLR420W	LRE1	P25579	583 aa	Known RBP	4.55	□□□□□ -1.68
URA4	YLR420W	YBR138C	P38277	524 aa		4.55	□□□□□ -1.68
URA4	YLR420W	ACA1	P39970	489 aa		4.55	□□□□□ -1.68
URA4	YLR420W	EAF6	P47128	113 aa		4.55	□□□□□ -1.68
URA4	YLR420W	MSY1	P48527	492 aa		4.55	□□□□□ -1.68
URA4	YLR420W	SCS3	P53012	380 aa		4.55	□□□□□ -1.68
URA4	YLR420W	DIB1	Q06819	143 aa	Predicted RBP	4.55	□□□□□ -1.68
URA4	YLR420W	SNA4	Q07549	140 aa		4.55	□□□□□ -1.68
URA4	YLR420W	RAD16	P31244	790 aa		4.54	□□□□□ -1.68
URA4	YLR420W	YNG2	P38806	282 aa	Known RBP	4.54	□□□□□ -1.68
URA4	YLR420W	UBX4	P54730	416 aa		4.54	□□□□□ -1.68
URA4	YLR420W	BLS1	Q06071	122 aa		4.54	□□□□□ -1.68
URA4	YLR420W	SWA2	Q06677	668 aa		4.54	□□□□□ -1.68
URA4	YLR420W	CIR2	Q08822	631 aa		4.54	□□□□□ -1.68
URA4	YLR420W	UBX3	Q12229	455 aa		4.54	□□□□□ -1.68
URA4	YLR420W	COX17	Q12287	69 aa		4.54	□□□□□ -1.68
URA4	YLR420W	TPK1	P06244	397 aa		4.53	□□□□□ -1.68
URA4	YLR420W	MSM1	P22438	575 aa		4.53	□□□□□ -1.68
URA4	YLR420W	PFF1	P38244	976 aa		4.53	□□□□□ -1.68
URA4	YLR420W	NPR3	P38742	1146 aa		4.53	□□□□□ -1.68
URA4	YLR420W	BUD16	P39988	312 aa		4.53	□□□□□ -1.68
URA4	YLR420W	LSC1	P53598	329 aa	Known RBP	4.53	□□□□□ -1.68
URA4	YLR420W	MRPL13	Q02204	264 aa		4.53	□□□□□ -1.68
URA4	YLR420W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
URA4	YLR420W	YCP4	P25349	247 aa	Known RBP	4.52	□□□□□ -1.69
URA4	YLR420W	SMY1	P32364	656 aa	Known RBP	4.52	□□□□□ -1.69
URA4	YLR420W	LHS1	P36016	881 aa		4.52	□□□□□ -1.69
URA4	YLR420W	PXL1	P36166	706 aa		4.52	□□□□□ -1.69
URA4	YLR420W	TPA1	P40032	644 aa	Known RBP	4.52	□□□□□ -1.69
URA4	YLR420W	LYS20	P48570	428 aa	Known RBP	4.52	□□□□□ -1.69
URA4	YLR420W	SYF1	Q04048	859 aa	Predicted RBP	4.52	□□□□□ -1.69
URA4	YLR420W	SAC3	P46674	1301 aa		4.51	□□□□□ -1.69
URA4	YLR420W	NCP1	P16603	691 aa	Known RBP	4.51	□□□□□ -1.69
URA4	YLR420W	ATO2	P32907	282 aa		4.51	□□□□□ -1.69
URA4	YLR420W	PTH2	P34222	208 aa		4.51	□□□□□ -1.69
URA4	YLR420W	GND1	P38720	489 aa	Known RBP	4.51	□□□□□ -1.69
URA4	YLR420W	VRG4	P40107	337 aa		4.51	□□□□□ -1.69
URA4	YLR420W	ASE1	P50275	885 aa		4.51	□□□□□ -1.69
URA4	YLR420W	ERO1	Q03103	563 aa		4.51	□□□□□ -1.69
URA4	YLR420W	SWF1	Q04629	336 aa		4.51	□□□□□ -1.69
URA4	YLR420W	GSH2	Q08220	491 aa		4.51	□□□□□ -1.69
URA4	YLR420W	DSE3	Q08729	430 aa		4.51	□□□□□ -1.69
URA4	YLR420W	SUP35	P05453	685 aa	Known RBP	4.5	□□□□□ -1.69
URA4	YLR420W	YML003W	P0CF16	290 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms