RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	GCN4	P03069	281 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	RPL19A	P0CX82	189 aa	Known RBP	4.81	□□□□□ -1.64
CDA2	YLR308W	RPL19B	P0CX83	189 aa	Predicted RBP	4.81	□□□□□ -1.64
CDA2	YLR308W	AAC3	P18238	307 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	VMA16	P23968	213 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	PDB1	P32473	366 aa	Known RBP	4.81	□□□□□ -1.64
CDA2	YLR308W	LYS14	P40971	790 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	ORC5	P50874	479 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	RSM28	Q03430	361 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	IMH1	Q06704	911 aa	Known RBP	4.81	□□□□□ -1.64
CDA2	YLR308W	YLR049C	Q12110	428 aa		4.81	□□□□□ -1.64
CDA2	YLR308W	CMK1	P27466	446 aa	Known RBP	4.8	□□□□□ -1.64
CDA2	YLR308W	FLC2	P39719	783 aa		4.8	□□□□□ -1.64
CDA2	YLR308W	PKP1	P40530	394 aa		4.8	□□□□□ -1.64
CDA2	YLR308W	ARF3	P40994	183 aa	RIP-Chip data	4.8	□□□□□ -1.64	not detected
CDA2	YLR308W	IRC8	P47046	822 aa		4.8	□□□□□ -1.64
CDA2	YLR308W	YSA1	Q01976	231 aa		4.8	□□□□□ -1.64
CDA2	YLR308W	RAD30	Q04049	632 aa		4.8	□□□□□ -1.64
CDA2	YLR308W	YOR019W	Q99248	730 aa		4.8	□□□□□ -1.64
CDA2	YLR308W	YCP4	P25349	247 aa	Known RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	ADH7	P25377	361 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	YKL050C	P35736	922 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	DIA4	P38705	446 aa	Predicted RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	SPC97	P38863	823 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	PSD1	P39006	500 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	ECM10	P39987	644 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	YJL107C	P42947	387 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	RMD8	P43620	662 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	DPB11	P47027	764 aa	Predicted RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	UPF3	P48412	387 aa	Known RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	SCS3	P53012	380 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	STR3	P53101	465 aa	Known RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	PIL1	P53252	339 aa	Known RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	RIX7	Q07844	837 aa	Known RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	ENT4	Q07872	247 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	ETT1	Q08421	412 aa	Known RBP	4.79	□□□□□ -1.64
CDA2	YLR308W	NMD4	Q12129	218 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CDA2	YLR308W	RRI1	Q12468	440 aa		4.79	□□□□□ -1.64
CDA2	YLR308W	CDC31	P06704	161 aa	Known RBP	4.78	□□□□□ -1.64
CDA2	YLR308W	PCT1	P13259	424 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	YSP3	P25036	478 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	SGF29	P25554	259 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	ESL2	P36168	1195 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	SCO2	P38072	301 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	GND1	P38720	489 aa	Known RBP	4.78	□□□□□ -1.64
CDA2	YLR308W	CDC1	P40986	491 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	CTK2	P46962	323 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	UBP8	P50102	471 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	DUO1	P53168	247 aa	Known RBP	4.78	□□□□□ -1.64
CDA2	YLR308W	RBG2	P53295	368 aa	Known RBP	4.78	□□□□□ -1.64
CDA2	YLR308W	INN1	P53901	409 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	BUD22	Q04347	519 aa	Known RBP	4.78	□□□□□ -1.64
CDA2	YLR308W	YKU80	Q04437	629 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	MRPL1	Q04599	285 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	ECM22	Q05958	814 aa	Predicted RBP	4.78	□□□□□ -1.64
CDA2	YLR308W	SDH5	Q08230	162 aa		4.78	□□□□□ -1.64
CDA2	YLR308W	YPT1	P01123	206 aa	Known RBP	4.77	□□□□□ -1.65
CDA2	YLR308W	SRP54	P20424	541 aa	Known RBP	4.77	□□□□□ -1.65
CDA2	YLR308W	CNA1	P23287	553 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	OCA4	P25366	362 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	MGM1	P32266	881 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	LYS20	P48570	428 aa	Known RBP	4.77	□□□□□ -1.65
CDA2	YLR308W	YGR066C	P53242	292 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	YGR127W	P53275	312 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	TDA9	Q04545	1251 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	ARP9	Q05123	467 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	GPN2	Q08726	347 aa	Predicted RBP	4.77	□□□□□ -1.65
CDA2	YLR308W	APL4	Q12028	832 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	TAH18	Q12181	623 aa		4.77	□□□□□ -1.65
CDA2	YLR308W	RAP1	P11938	827 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	AIM17	P23180	465 aa	Known RBP	4.76	□□□□□ -1.65
CDA2	YLR308W	AUR1	P36107	401 aa	Predicted RBP	4.76	□□□□□ -1.65
CDA2	YLR308W	ARN1	P38731	627 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	TPA1	P40032	644 aa	Known RBP	4.76	□□□□□ -1.65
CDA2	YLR308W	NDE1	P40215	560 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	ESL1	P40456	1118 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	SEC24	P40482	926 aa	Known RBP	4.76	□□□□□ -1.65
CDA2	YLR308W	YIR016W	P40572	265 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	SWP82	P43554	623 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	FAR3	P46671	204 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	YPT11	P48559	417 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	DIA3	P52290	468 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	YNL144C	P53907	740 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	RPT6	Q01939	405 aa	Known RBP	4.76	□□□□□ -1.65
CDA2	YLR308W	CTI6	Q08923	506 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	INP53	Q12271	1107 aa		4.76	□□□□□ -1.65
CDA2	YLR308W	KRS1	P15180	591 aa	Known RBP	4.75	□□□□□ -1.65
CDA2	YLR308W	OLE1	P21147	510 aa	Known RBP	4.75	□□□□□ -1.65
CDA2	YLR308W	YCK1	P23291	538 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	YIH1	P25637	258 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	PEP3	P27801	918 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	OCT1	P35999	772 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	ADE17	P38009	592 aa	Known RBP	4.75	□□□□□ -1.65
CDA2	YLR308W	MAL33	P38157	468 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	FMP10	P40098	244 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	VID30	P53076	958 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	VTC3	Q02725	835 aa		4.75	□□□□□ -1.65
CDA2	YLR308W	YMR178W	Q03219	274 aa	Known RBP	4.75	□□□□□ -1.65
CDA2	YLR308W	SWF1	Q04629	336 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms