RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W ACA1P39970 489 aa2.12□□□□□ -2.07
VPS34YLR240W YGL242CP53066 181 aa2.12□□□□□ -2.07
VPS34YLR240W TFC6Q06339 672 aa2.12□□□□□ -2.07
VPS34YLR240W YOR389WQ08912 624 aa2.12□□□□□ -2.07
VPS34YLR240W RPL22AP05749 121 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W ILV2P07342 687 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W LPD1P09624 499 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W MSM1P22438 575 aa2.11□□□□□ -2.07
VPS34YLR240W PTC6P25646 442 aa2.11□□□□□ -2.07
VPS34YLR240W PHM8P40025 321 aa2.11□□□□□ -2.07
VPS34YLR240W MNT3P40549 630 aa2.11□□□□□ -2.07
VPS34YLR240W CFD1P40558 293 aa2.11□□□□□ -2.07
VPS34YLR240W SKP2P42843 763 aa2.11□□□□□ -2.07
VPS34YLR240W COP1P53622 1201 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W MTG1Q03151 367 aaPredicted RBP2.11□□□□□ -2.07
VPS34YLR240W TRS130Q03660 1102 aa2.11□□□□□ -2.07
VPS34YLR240W ATG23Q06671 453 aa2.11□□□□□ -2.07
VPS34YLR240W LEA1Q08963 238 aaPredicted RBP2.11□□□□□ -2.07
VPS34YLR240W RGT2Q12300 763 aa2.11□□□□□ -2.07
VPS34YLR240W POM152P39685 1337 aa2.11□□□□□ -2.07
VPS34YLR240W CYB2P00175 591 aa2.11□□□□□ -2.07
VPS34YLR240W COX1P00401 534 aa2.11□□□□□ -2.07
VPS34YLR240W PGI1P12709 554 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W APA1P16550 321 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W YCL049CP25577 312 aa2.11□□□□□ -2.07
VPS34YLR240W LRE1P25579 583 aaKnown RBP2.11□□□□□ -2.07
VPS34YLR240W MSP1P28737 362 aa2.11□□□□□ -2.07
VPS34YLR240W IES5P40060 125 aa2.11□□□□□ -2.07
VPS34YLR240W TPM2P40414 161 aa2.11□□□□□ -2.07
VPS34YLR240W RSM25P40496 264 aa2.11□□□□□ -2.07
VPS34YLR240W YIL024CP40543 189 aa2.11□□□□□ -2.07
VPS34YLR240W DOT5P40553 215 aa2.11□□□□□ -2.07
VPS34YLR240W ERR3P42222 437 aa2.11□□□□□ -2.07
VPS34YLR240W VTC3Q02725 835 aa2.11□□□□□ -2.07
VPS34YLR240W VAM6Q07468 1049 aa2.11□□□□□ -2.07
VPS34YLR240W NCP1P16603 691 aaKnown RBP2.1□□□□□ -2.07
VPS34YLR240W CLB4P24871 460 aa2.1□□□□□ -2.07
VPS34YLR240W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
VPS34YLR240W CAB3P36076 571 aa2.1□□□□□ -2.07
VPS34YLR240W CDC1P40986 491 aa2.1□□□□□ -2.07
VPS34YLR240W GAT1P43574 510 aa2.1□□□□□ -2.07
VPS34YLR240W ZAP1P47043 880 aa2.1□□□□□ -2.07
VPS34YLR240W UBX6P47049 396 aa2.1□□□□□ -2.07
VPS34YLR240W SEC5P89102 971 aa2.1□□□□□ -2.07
VPS34YLR240W THI3Q07471 609 aa2.1□□□□□ -2.07
VPS34YLR240W BAG7Q12128 409 aa2.1□□□□□ -2.07
VPS34YLR240W GEX2P36173 615 aa2.1□□□□□ -2.07
VPS34YLR240W RFT1P38206 574 aaPredicted RBP2.1□□□□□ -2.07
VPS34YLR240W NPR3P38742 1146 aa2.1□□□□□ -2.07
VPS34YLR240W JHD1P40034 492 aa2.1□□□□□ -2.07
VPS34YLR240W DJP1P40564 432 aa2.1□□□□□ -2.07
VPS34YLR240W MSY1P48527 492 aa2.1□□□□□ -2.07
VPS34YLR240W ORC5P50874 479 aa2.1□□□□□ -2.07
VPS34YLR240W ARC35P53731 342 aaKnown RBP2.1□□□□□ -2.07
VPS34YLR240W SYF1Q04048 859 aaPredicted RBP2.1□□□□□ -2.07
VPS34YLR240W YAP7Q08182 245 aa2.1□□□□□ -2.07
VPS34YLR240W RIM20Q12033 661 aa2.1□□□□□ -2.07
VPS34YLR240W TAH18Q12181 623 aa2.1□□□□□ -2.07
VPS34YLR240W YER190C-BP0CX94 160 aa2.09□□□□□ -2.07
VPS34YLR240W YEL077W-AP0CX95 160 aa2.09□□□□□ -2.07
VPS34YLR240W YGR296C-BP0CX96 160 aa2.09□□□□□ -2.07
VPS34YLR240W YPL283W-BP0CX97 160 aa2.09□□□□□ -2.07
VPS34YLR240W YPR204C-AP0CX98 160 aa2.09□□□□□ -2.07
VPS34YLR240W MTF2P10849 440 aa2.09□□□□□ -2.07
VPS34YLR240W SPC110P32380 944 aa2.09□□□□□ -2.07
VPS34YLR240W AAP1P37898 856 aaKnown RBP2.09□□□□□ -2.07
VPS34YLR240W SPC97P38863 823 aa2.09□□□□□ -2.07
VPS34YLR240W YMR124WP39523 943 aaKnown RBP2.09□□□□□ -2.07
VPS34YLR240W PCI8P40512 444 aa2.09□□□□□ -2.07
VPS34YLR240W FAF1P40546 346 aaPredicted RBP2.09□□□□□ -2.07
VPS34YLR240W YJL107CP42947 387 aa2.09□□□□□ -2.07
VPS34YLR240W GEP3Q08622 556 aa2.09□□□□□ -2.07
VPS34YLR240W PFA4Q12006 378 aa2.09□□□□□ -2.07
VPS34YLR240W GAL4P04386 881 aa2.09□□□□□ -2.08
VPS34YLR240W YML003WP0CF16 290 aa2.09□□□□□ -2.08
VPS34YLR240W RPL19AP0CX82 189 aaKnown RBP2.09□□□□□ -2.08
VPS34YLR240W RPL19BP0CX83 189 aaPredicted RBP2.09□□□□□ -2.08
VPS34YLR240W ASK1P35734 292 aa2.09□□□□□ -2.08
VPS34YLR240W PFF1P38244 976 aa2.09□□□□□ -2.08
VPS34YLR240W EXO84P38261 753 aa2.09□□□□□ -2.08
VPS34YLR240W ARN1P38731 627 aa2.09□□□□□ -2.08
VPS34YLR240W TOM71P38825 639 aaKnown RBP2.09□□□□□ -2.08
VPS34YLR240W TPA1P40032 644 aaKnown RBP2.09□□□□□ -2.08
VPS34YLR240W YDR109CQ04585 715 aa2.09□□□□□ -2.08
VPS34YLR240W STP3Q05937 343 aa2.09□□□□□ -2.08
VPS34YLR240W SWT1Q12104 458 aa2.09□□□□□ -2.08
VPS34YLR240W YPL150WQ12152 901 aa2.09□□□□□ -2.08
VPS34YLR240W MATALPHA2P0CY08 210 aa2.08□□□□□ -2.08
VPS34YLR240W HMLALPHA2P0CY09 210 aa2.08□□□□□ -2.08
VPS34YLR240W YSP3P25036 478 aa2.08□□□□□ -2.08
VPS34YLR240W RFA2P26754 273 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W MSS51P32335 436 aa2.08□□□□□ -2.08
VPS34YLR240W MRPL36P36531 177 aa2.08□□□□□ -2.08
VPS34YLR240W SCW4P53334 386 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W YPR003CP53394 754 aa2.08□□□□□ -2.08
VPS34YLR240W CSL4P53859 292 aaPredicted RBP2.08□□□□□ -2.08
VPS34YLR240W MPS1P54199 764 aa2.08□□□□□ -2.08
VPS34YLR240W RPL15BP54780 204 aaPredicted RBP2.08□□□□□ -2.08
VPS34YLR240W YPL068CQ02749 293 aa2.08□□□□□ -2.08
VPS34YLR240W BLS1Q06071 122 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms