RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W DBP7P36120 742 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W YBR184WP38299 523 aa4.7□□□□□ -1.66
ABF1YKL112W YHL008CP38750 627 aa4.7□□□□□ -1.66
ABF1YKL112W RTT107P38850 1070 aa4.7□□□□□ -1.66
ABF1YKL112W SCC4P40090 624 aa4.7□□□□□ -1.66
ABF1YKL112W SIP5P40210 489 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W DPH1P40487 425 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W VID28P40547 921 aa4.7□□□□□ -1.66
ABF1YKL112W QRI7P43122 407 aa4.7□□□□□ -1.66
ABF1YKL112W YJL045WP47052 634 aa4.7□□□□□ -1.66
ABF1YKL112W HSV2P50079 448 aaPredicted RBP4.7□□□□□ -1.66
ABF1YKL112W AZR1P50080 613 aa4.7□□□□□ -1.66
ABF1YKL112W HFM1P51979 1187 aa4.7□□□□□ -1.66
ABF1YKL112W RAI1P53063 387 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W YGR127WP53275 312 aa4.7□□□□□ -1.66
ABF1YKL112W TUB4P53378 473 aa4.7□□□□□ -1.66
ABF1YKL112W ARE2P53629 642 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W HDA1P53973 706 aa4.7□□□□□ -1.66
ABF1YKL112W YAP6Q03935 383 aa4.7□□□□□ -1.66
ABF1YKL112W RPN9Q04062 393 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W YMR114CQ04471 368 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W DFG5Q05031 458 aa4.7□□□□□ -1.66
ABF1YKL112W VPS38Q05919 439 aa4.7□□□□□ -1.66
ABF1YKL112W DCR2Q05924 578 aa4.7□□□□□ -1.66
ABF1YKL112W SOG2Q08817 791 aa4.7□□□□□ -1.66
ABF1YKL112W LEU9Q12166 604 aaKnown RBP4.7□□□□□ -1.66
ABF1YKL112W SET6Q12529 373 aa4.7□□□□□ -1.66
ABF1YKL112W SIR3P06701 978 aa4.69□□□□□ -1.66
ABF1YKL112W NMT1P14743 455 aa4.69□□□□□ -1.66
ABF1YKL112W SCJ1P25303 377 aa4.69□□□□□ -1.66
ABF1YKL112W TGL1P34163 548 aa4.69□□□□□ -1.66
ABF1YKL112W YJR056CP47115 236 aa4.69□□□□□ -1.66
ABF1YKL112W ERP6P53198 216 aa4.69□□□□□ -1.66
ABF1YKL112W COQ6P53318 479 aa4.69□□□□□ -1.66
ABF1YKL112W NHX1Q04121 633 aa4.69□□□□□ -1.66
ABF1YKL112W GYL1Q04322 720 aa4.69□□□□□ -1.66
ABF1YKL112W MFB1Q04922 465 aa4.69□□□□□ -1.66
ABF1YKL112W YLR456WQ06199 204 aa4.69□□□□□ -1.66
ABF1YKL112W DDC1Q08949 612 aa4.69□□□□□ -1.66
ABF1YKL112W YRR1Q12172 810 aa4.69□□□□□ -1.66
ABF1YKL112W MCM16Q12262 181 aa4.69□□□□□ -1.66
ABF1YKL112W ERP3Q12403 225 aa4.69□□□□□ -1.66
ABF1YKL112W RVB2Q12464 471 aaKnown RBP4.69□□□□□ -1.66
ABF1YKL112W ADE3P07245 946 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W WHI2P12611 486 aa4.68□□□□□ -1.66
ABF1YKL112W AEP2P22136 580 aa4.68□□□□□ -1.66
ABF1YKL112W MAE1P36013 669 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W YHL017WP38745 532 aa4.68□□□□□ -1.66
ABF1YKL112W OSH7P38755 437 aa4.68□□□□□ -1.66
ABF1YKL112W SUR2P38992 349 aa4.68□□□□□ -1.66
ABF1YKL112W GIM4P40005 111 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W RPT6Q01939 405 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W SRL4Q03085 281 aa4.68□□□□□ -1.66
ABF1YKL112W SLD5Q03406 294 aa4.68□□□□□ -1.66
ABF1YKL112W MTQ2Q03920 221 aaPredicted RBP4.68□□□□□ -1.66
ABF1YKL112W SEG1Q04279 960 aa4.68□□□□□ -1.66
ABF1YKL112W PIG1Q06216 648 aa4.68□□□□□ -1.66
ABF1YKL112W MMR1Q06324 491 aa4.68□□□□□ -1.66
ABF1YKL112W SGO1Q08490 590 aa4.68□□□□□ -1.66
ABF1YKL112W RPN8Q08723 338 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W ATP16Q12165 160 aa4.68□□□□□ -1.66
ABF1YKL112W IMG2P25642 146 aaPredicted RBP4.68□□□□□ -1.66
ABF1YKL112W PPZ1P26570 692 aa4.68□□□□□ -1.66
ABF1YKL112W DCW1P36091 449 aa4.68□□□□□ -1.66
ABF1YKL112W PGM2P37012 569 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W PIK1P39104 1066 aa4.68□□□□□ -1.66
ABF1YKL112W BDH2P39713 417 aa4.68□□□□□ -1.66
ABF1YKL112W CIN5P40917 295 aa4.68□□□□□ -1.66
ABF1YKL112W ACS2P52910 683 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W SGF73P53165 657 aa4.68□□□□□ -1.66
ABF1YKL112W SLT2Q00772 484 aa4.68□□□□□ -1.66
ABF1YKL112W HOS3Q02959 697 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W RAD30Q04049 632 aa4.68□□□□□ -1.66
ABF1YKL112W AIM32Q04689 311 aa4.68□□□□□ -1.66
ABF1YKL112W LCB5Q06147 687 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W VPS74Q06385 345 aa4.68□□□□□ -1.66
ABF1YKL112W CSC1Q06538 782 aa4.68□□□□□ -1.66
ABF1YKL112W GPN2Q08726 347 aaPredicted RBP4.68□□□□□ -1.66
ABF1YKL112W OSW2Q12202 724 aa4.68□□□□□ -1.66
ABF1YKL112W CMR1Q12510 522 aaKnown RBP4.68□□□□□ -1.66
ABF1YKL112W CBP2P03874 630 aaPredicted RBP4.67□□□□□ -1.66
ABF1YKL112W HTA1P04911 132 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W HTA2P04912 132 aa4.67□□□□□ -1.66
ABF1YKL112W MATALPHA2P0CY08 210 aa4.67□□□□□ -1.66
ABF1YKL112W HMLALPHA2P0CY09 210 aa4.67□□□□□ -1.66
ABF1YKL112W PFK1P16861 987 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W KGD1P20967 1014 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W FUB1P25659 250 aa4.67□□□□□ -1.66
ABF1YKL112W ADK2P26364 225 aa4.67□□□□□ -1.66
ABF1YKL112W ITR2P30606 609 aa4.67□□□□□ -1.66
ABF1YKL112W MKK2P32491 506 aa4.67□□□□□ -1.66
ABF1YKL112W NCL1P38205 684 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W STP2P38704 541 aa4.67□□□□□ -1.66
ABF1YKL112W LIN1P38852 340 aaPredicted RBP4.67□□□□□ -1.66
ABF1YKL112W RPN10P38886 268 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W NTA1P40354 457 aa4.67□□□□□ -1.66
ABF1YKL112W UBP7P40453 1071 aa4.67□□□□□ -1.66
ABF1YKL112W UTP25P40498 721 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W MRPS18P42847 217 aa4.67□□□□□ -1.66
ABF1YKL112W GUS1P46655 708 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms