RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	BUD22	Q04347	519 aa	Known RBP	3.57	□□□□□ -1.84
SOD1	YJR104C	YMR018W	Q04364	514 aa		3.57	□□□□□ -1.84
SOD1	YJR104C	SMD2	Q06217	110 aa	Known RBP	3.57	□□□□□ -1.84
SOD1	YJR104C	MRI1	Q06489	411 aa	Known RBP	3.57	□□□□□ -1.84
SOD1	YJR104C	YDL109C	Q12103	647 aa		3.57	□□□□□ -1.84
SOD1	YJR104C	YLL058W	Q12198	575 aa		3.57	□□□□□ -1.84
SOD1	YJR104C	PDH1	Q12428	516 aa	Known RBP	3.57	□□□□□ -1.84
SOD1	YJR104C	PGA3	Q12746	312 aa	Known RBP	3.57	□□□□□ -1.84
SOD1	YJR104C	YBL111C	Q3E7Y5	667 aa		3.57	□□□□□ -1.84
SOD1	YJR104C	YPT6	Q99260	215 aa		3.57	□□□□□ -1.84
SOD1	YJR104C	MF(ALPHA)1	P01149	165 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	SIR3	P06701	978 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	GPA2	P10823	449 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	DBP5	P20449	482 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	DBF2	P22204	572 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	NPR1	P22211	790 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	PRP22	P24384	1145 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	RAD27	P26793	382 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	CHS3	P29465	1165 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	MLS1	P30952	554 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	ACH1	P32316	526 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	CYM1	P32898	989 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	CLG1	P35190	452 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	ATG19	P35193	415 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	MRPL17	P36528	281 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	POL12	P38121	705 aa	Predicted RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	PPS1	P38148	807 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	SDH8	P38345	138 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	OTU2	P38747	307 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	NEM1	P38757	446 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	VMA7	P39111	118 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	GEM1	P39722	662 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	SAH1	P39954	449 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	DDI1	P40087	428 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	GLG2	P47011	380 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	BNA3	P47039	444 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	EMC2	P47133	292 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	STB4	P50104	949 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	PSP2	P50109	593 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	NUP84	P52891	726 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	DRN1	P53255	507 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	MRPL50	P53724	139 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	ARC35	P53731	342 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	ORC4	P54791	529 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	SHR3	Q02774	210 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	MLC2	Q06580	163 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	MRL1	Q06815	381 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	DTD1	Q07648	150 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	BRX1	Q08235	291 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	PUS7	Q08647	676 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	TMA46	Q12000	345 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	HUA2	Q12134	243 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	DBP10	Q12389	995 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	CMR1	Q12510	522 aa	Known RBP	3.56	□□□□□ -1.84
SOD1	YJR104C	YIL046W-A	Q3E7Z4	54 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	VCX1	Q99385	411 aa		3.56	□□□□□ -1.84
SOD1	YJR104C	ATP6	P00854	259 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	CLN3	P13365	580 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	PMS1	P14242	873 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	OPI1	P21957	404 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	ATP12	P22135	325 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	URE2	P23202	354 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
SOD1	YJR104C	YBL010C	P32788	280 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	AFR1	P33304	620 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	PXA2	P34230	853 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	MYO3	P36006	1272 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	UBP11	P36026	717 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	YKL077W	P36081	392 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	MAK5	P38112	773 aa	Predicted RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	YBR032W	P38223	100 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	SLM4	P38247	162 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	TIF5	P38431	405 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	RIM11	P38615	370 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	YHL026C	P38740	315 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	SSP120	P39931	234 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	ZRG8	P40021	1076 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	YER034W	P40022	185 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	YJL070C	P40361	888 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	DPH1	P40487	425 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	PRK1	P40494	810 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	PCI8	P40512	444 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	NEO1	P40527	1151 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	YIR007W	P40566	764 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	ELP2	P42935	788 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	GYP8	P43570	497 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	EPL1	P43572	832 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	AIP1	P46680	615 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	YJL049W	P47048	450 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	MDE1	P47095	244 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	LYS5	P50113	272 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	MAL11	P53048	616 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	USE1	P53146	245 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	PEF1	P53238	335 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	ZRG17	P53735	605 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	YNR063W	P53749	607 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	VAC7	P53950	1165 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	ALO1	P54783	526 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	OSH6	Q02201	448 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	RPL6A	Q02326	176 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms