RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	TRS130	Q03660	1102 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	RTN1	Q04947	295 aa	Known RBP	4.89	□□□□□ -1.63
CPS1	YJL172W	RTT103	Q05543	409 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	ISR1	Q06098	443 aa	Known RBP	4.89	□□□□□ -1.63
CPS1	YJL172W	PIG1	Q06216	648 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	NDE2	Q07500	545 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	YLR031W	Q07978	186 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	RSC58	Q07979	502 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
CPS1	YJL172W	AEP3	Q12089	606 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	YOS9	Q99220	542 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	SEY1	Q99287	776 aa		4.89	□□□□□ -1.63
CPS1	YJL172W	BI4	P03879	638 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	ENA1	P13587	1091 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	MET8	P15807	274 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	MSB1	P21339	1137 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	DPB2	P24482	689 aa	Predicted RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	RVS161	P25343	265 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	CRM1	P30822	1084 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	HXT3	P32466	567 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	CDC12	P32468	407 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	MUD1	P32605	298 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	YBL010C	P32788	280 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	YKR015C	P36111	568 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	SHM1	P37292	490 aa	Predicted RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	SEC31	P38968	1273 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	SIP5	P40210	489 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	TMA108	P40462	946 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	ALT2	P52892	507 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	MAL11	P53048	616 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	YNL134C	P53912	376 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	TGL2	P54857	326 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	ENA2	Q01896	1091 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	ECM30	Q06673	1274 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	YFT2	Q06676	274 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	DIS3	Q08162	1001 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	GET4	Q12125	312 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	ENA5	Q12691	1091 aa		4.88	□□□□□ -1.63
CPS1	YJL172W	FKS1	P38631	1876 aa	Known RBP	4.88	□□□□□ -1.63
CPS1	YJL172W	RPS6A	P0CX37	236 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	RPS6B	P0CX38	236 aa	Predicted RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	GPA2	P10823	449 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	SPO11	P23179	398 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	CNA1	P23287	553 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	FUB1	P25659	250 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	NAM9	P27929	486 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	THI4	P32318	326 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	LYP1	P32487	611 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	GCG1	P32656	232 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
CPS1	YJL172W	VPS21	P36017	210 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	SEA4	P38164	1038 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	MMS4	P38257	691 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	VID24	P38263	362 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	BMT2	P38278	337 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	MIP6	P38760	659 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	LRP1	P38801	184 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	CCT2	P39076	527 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	NPP2	P39997	493 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	EMP65	P40085	556 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	LCB2	P40970	561 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	TDA10	P42938	290 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	BNA3	P47039	444 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	TIM8	P57744	87 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	SRL4	Q03085	281 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	UTP5	Q04177	643 aa	Known RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	COA4	Q05809	96 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	YEH2	Q07950	538 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	FMP40	Q08968	688 aa	Predicted RBP	4.87	□□□□□ -1.63
CPS1	YJL172W	YDL109C	Q12103	647 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	NCA2	Q12374	616 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	AVL9	Q12500	764 aa		4.87	□□□□□ -1.63
CPS1	YJL172W	STE12	P13574	688 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	GCN3	P14741	305 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	BAS1	P22035	811 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	PTP1	P25044	335 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	MRS6	P32864	603 aa	Known RBP	4.86	□□□□□ -1.63
CPS1	YJL172W	RPC25	P35718	212 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	CAF4	P36130	643 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	PRM9	P39551	298 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	MKT1	P40850	830 aa	Known RBP	4.86	□□□□□ -1.63
CPS1	YJL172W	NOP9	P47077	666 aa	Known RBP	4.86	□□□□□ -1.63
CPS1	YJL172W	ORC5	P50874	479 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	MNT2	P53059	558 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	MNT4	P53745	580 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	YNR063W	P53749	607 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	RPA49	Q01080	415 aa	Predicted RBP	4.86	□□□□□ -1.63
CPS1	YJL172W	MUK1	Q02866	612 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	YLR297W	Q05899	129 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	HDA3	Q06623	655 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	YPR078C	Q06813	372 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	FAL1	Q12099	399 aa	Known RBP	4.86	□□□□□ -1.63
CPS1	YJL172W	YPR022C	Q12139	1133 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	SET6	Q12529	373 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	LAG2	Q92325	660 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	TSC13	Q99190	310 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	PRP28	P23394	588 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	CLB2	P24869	491 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	MEI5	P32489	222 aa		4.86	□□□□□ -1.63
CPS1	YJL172W	MDJ1	P35191	511 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms