RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C PRP9P19736 530 aaKnown RBP13.17□□□□□ -0.3
SHU1YHL006C TPS2P31688 896 aaKnown RBP13.17□□□□□ -0.3
SHU1YHL006C GUT2P32191 649 aa13.17□□□□□ -0.3
SHU1YHL006C STB6P36085 766 aa13.17□□□□□ -0.3
SHU1YHL006C PIM1P36775 1133 aa13.17□□□□□ -0.3
SHU1YHL006C DED81P38707 554 aaKnown RBP13.17□□□□□ -0.3
SHU1YHL006C YAL037WP39728 267 aa13.17□□□□□ -0.3
SHU1YHL006C YEL073CP39974 107 aa13.17□□□□□ -0.3
SHU1YHL006C PEX8P53248 589 aa13.17□□□□□ -0.3
SHU1YHL006C OSH6Q02201 448 aa13.17□□□□□ -0.3
SHU1YHL006C NUT2Q06213 157 aa13.17□□□□□ -0.3
SHU1YHL006C PFA4Q12006 378 aa13.17□□□□□ -0.3
SHU1YHL006C NSP1P14907 823 aaKnown RBP13.16□□□□□ -0.3
SHU1YHL006C HSP60P19882 572 aaKnown RBP13.16□□□□□ -0.3
SHU1YHL006C RNQ1P25367 405 aa13.16□□□□□ -0.3
SHU1YHL006C YCR099CP25657 155 aa13.16□□□□□ -0.3
SHU1YHL006C URA7P28274 579 aaKnown RBP13.16□□□□□ -0.3
SHU1YHL006C GDA1P32621 518 aa13.16□□□□□ -0.3
SHU1YHL006C LSM5P40089 93 aaKnown RBP13.16□□□□□ -0.3
SHU1YHL006C TFB2Q02939 513 aa13.16□□□□□ -0.3
SHU1YHL006C CCE1Q03702 353 aa13.16□□□□□ -0.3
SHU1YHL006C TEF1P02994 458 aaKnown RBP13.15□□□□□ -0.3
SHU1YHL006C CMD1P06787 147 aaKnown RBP13.15□□□□□ -0.3
SHU1YHL006C INO1P11986 533 aa13.15□□□□□ -0.3
SHU1YHL006C HSP26P15992 214 aaKnown RBP RIP-Chip data13.15□□□□□ -0.3not detected
SHU1YHL006C URA10P30402 227 aa13.15□□□□□ -0.3
SHU1YHL006C YER158CP40095 573 aa13.15□□□□□ -0.3
SHU1YHL006C SSU1P41930 458 aa13.15□□□□□ -0.3
SHU1YHL006C RPL22BP56628 122 aaKnown RBP13.15□□□□□ -0.3
SHU1YHL006C NPL3Q01560 414 aaKnown RBP RIP-Chip data13.15□□□□□ -0.3not detected
SHU1YHL006C ECM9Q02202 377 aa13.15□□□□□ -0.3
SHU1YHL006C EGD1Q02642 157 aaKnown RBP13.15□□□□□ -0.3
SHU1YHL006C YSW1P38280 609 aa13.14□□□□□ -0.31
SHU1YHL006C BLS1Q06071 122 aa13.14□□□□□ -0.31
SHU1YHL006C VTA1Q06263 330 aa13.14□□□□□ -0.31
SHU1YHL006C CUE5Q08412 411 aaKnown RBP13.14□□□□□ -0.31
SHU1YHL006C SKM1Q12469 655 aa13.14□□□□□ -0.31
SHU1YHL006C SEM1O94742 89 aa13.13□□□□□ -0.31
SHU1YHL006C STE4P18851 423 aa13.13□□□□□ -0.31
SHU1YHL006C REI1P38344 393 aaPredicted RBP13.13□□□□□ -0.31
SHU1YHL006C CCT4P39078 528 aaKnown RBP13.13□□□□□ -0.31
SHU1YHL006C YJL107CP42947 387 aa13.13□□□□□ -0.31
SHU1YHL006C YDR109CQ04585 715 aa13.13□□□□□ -0.31
SHU1YHL006C YDR061WQ12298 539 aa13.13□□□□□ -0.31
SHU1YHL006C GTT2Q12390 233 aa13.13□□□□□ -0.31
SHU1YHL006C SPO16P17122 198 aa13.12□□□□□ -0.31
SHU1YHL006C DAL82P21705 255 aa13.12□□□□□ -0.31
SHU1YHL006C ATP12P22135 325 aa13.12□□□□□ -0.31
SHU1YHL006C PHO3P24031 467 aa13.12□□□□□ -0.31
SHU1YHL006C SPT16P32558 1035 aaKnown RBP13.12□□□□□ -0.31
SHU1YHL006C NRP1P32770 719 aaKnown RBP RIP-Chip data13.12□□□□□ -0.31not detected
SHU1YHL006C MRPL37P36532 105 aa13.12□□□□□ -0.31
SHU1YHL006C ARA1P38115 344 aa13.12□□□□□ -0.31
SHU1YHL006C YNL320WP42840 284 aa13.12□□□□□ -0.31
SHU1YHL006C ZRG17P53735 605 aa13.12□□□□□ -0.31
SHU1YHL006C STP3Q05937 343 aa13.12□□□□□ -0.31
SHU1YHL006C FUM1P08417 488 aaKnown RBP13.11□□□□□ -0.31
SHU1YHL006C RSC6P25632 483 aa13.11□□□□□ -0.31
SHU1YHL006C MSH1P25846 959 aa13.11□□□□□ -0.31
SHU1YHL006C UBC6P33296 250 aaPredicted RBP13.11□□□□□ -0.31
SHU1YHL006C TOM20P35180 183 aa13.11□□□□□ -0.31
SHU1YHL006C LRG1P35688 1017 aa13.11□□□□□ -0.31
SHU1YHL006C YHI9P38765 294 aa13.11□□□□□ -0.31
SHU1YHL006C CFD1P40558 293 aa13.11□□□□□ -0.31
SHU1YHL006C SAE2P46946 345 aa13.11□□□□□ -0.31
SHU1YHL006C HST3P53687 447 aa13.11□□□□□ -0.31
SHU1YHL006C BNI4P53858 892 aa13.11□□□□□ -0.31
SHU1YHL006C COG6P53959 839 aa13.11□□□□□ -0.31
SHU1YHL006C STT4P37297 1900 aa13.11□□□□□ -0.31
SHU1YHL006C RAD1P06777 1100 aa13.1□□□□□ -0.31
SHU1YHL006C RIP1P08067 215 aa13.1□□□□□ -0.31
SHU1YHL006C PEP5P12868 1029 aa13.1□□□□□ -0.31
SHU1YHL006C SSN3P39073 555 aa13.1□□□□□ -0.31
SHU1YHL006C ARH1P48360 493 aa13.1□□□□□ -0.31
SHU1YHL006C ROT1Q03691 256 aa13.1□□□□□ -0.31
SHU1YHL006C YOR012WQ12351 137 aa13.1□□□□□ -0.31
SHU1YHL006C RRP1P35178 278 aaPredicted RBP13.09□□□□□ -0.31
SHU1YHL006C STS1P38637 319 aa13.09□□□□□ -0.31
SHU1YHL006C ADE13Q05911 482 aaKnown RBP13.09□□□□□ -0.31
SHU1YHL006C RSC3Q06639 885 aa13.09□□□□□ -0.31
SHU1YHL006C SYT1Q06836 1226 aa13.09□□□□□ -0.31
SHU1YHL006C YOL036WQ08206 761 aa13.09□□□□□ -0.31
SHU1YHL006C NUS1Q12063 375 aa13.09□□□□□ -0.31
SHU1YHL006C UPC2Q12151 913 aa13.09□□□□□ -0.31
SHU1YHL006C RMP1Q12530 201 aa13.09□□□□□ -0.31
SHU1YHL006C PHO5P00635 467 aa13.08□□□□□ -0.32
SHU1YHL006C BYE1P36106 594 aa13.08□□□□□ -0.32
SHU1YHL006C CCT8P47079 568 aaKnown RBP13.08□□□□□ -0.32
SHU1YHL006C NNF1P47149 201 aa13.08□□□□□ -0.32
SHU1YHL006C CDC123Q05791 360 aa13.08□□□□□ -0.32
SHU1YHL006C YDR262WQ12331 272 aa13.08□□□□□ -0.32
SHU1YHL006C STE2D6VTK4 431 aa13.07□□□□□ -0.32
SHU1YHL006C SWI5P08153 709 aa13.07□□□□□ -0.32
SHU1YHL006C MF(ALPHA)2P32435 120 aa13.07□□□□□ -0.32
SHU1YHL006C CDC13P32797 924 aaKnown RBP13.07□□□□□ -0.32
SHU1YHL006C TIP20P33891 701 aa13.07□□□□□ -0.32
SHU1YHL006C RPF2P36160 344 aaKnown RBP13.07□□□□□ -0.32
SHU1YHL006C HEM15P16622 393 aa13.06□□□□□ -0.32
SHU1YHL006C DPB3P27344 201 aa13.06□□□□□ -0.32
SHU1YHL006C ATP11P32453 318 aa13.06□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms