RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	SSN2	P38931	1420 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	VPS41	P38959	992 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	PHM8	P40025	321 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	RTT105	P40063	208 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	MET18	P40469	1032 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	LSG1	P53145	640 aa	Known RBP	4.25	□□□□□ -1.73
RTA1	YGR213C	CSL4	P53859	292 aa	Predicted RBP	4.25	□□□□□ -1.73
RTA1	YGR213C	SNZ1	Q03148	297 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	STP3	Q05937	343 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	PSR2	Q07949	397 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	CDC45	Q08032	650 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	BAG7	Q12128	409 aa		4.25	□□□□□ -1.73
RTA1	YGR213C	ILS1	P09436	1072 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	NAT1	P12945	854 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	MRPL25	P23369	157 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	RFA2	P26754	273 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	ECM32	P32644	1121 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	MRE11	P32829	692 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	MRS6	P32864	603 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	XRS2	P33301	854 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	UIP5	P36137	443 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	OTU2	P38747	307 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	SRB7	P47822	140 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	RSM28	Q03430	361 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	VTI1	Q04338	217 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	YDR109C	Q04585	715 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	RRN11	Q04712	507 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	FUS2	Q05670	677 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	ATG38	Q05789	226 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	SMD2	Q06217	110 aa	Known RBP	4.24	□□□□□ -1.73
RTA1	YGR213C	CRC1	Q12289	327 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	YOL087C	Q99247	1116 aa		4.24	□□□□□ -1.73
RTA1	YGR213C	SRB8	P25648	1427 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	ATP2	P00830	511 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	PCT1	P13259	424 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	SPO16	P17122	198 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	YSP3	P25036	478 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	CDC10	P25342	322 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	COQ3	P27680	312 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	DPH5	P32469	300 aa	Predicted RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	YKL100C	P34248	587 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	ESL2	P36168	1195 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	FUI1	P38196	639 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	YBL028C	P38202	106 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	IFA38	P38286	347 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	PEX18	P38855	283 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	SMC2	P38989	1170 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	CAJ1	P39101	391 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	CDC1	P40986	491 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	SMK1	P41808	388 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	YRB1	P41920	201 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	SHE10	P53075	577 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	YGR021W	P53212	290 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	YPR003C	P53394	754 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	STP1	Q00947	519 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	SSQ1	Q05931	657 aa	Predicted RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	CSR1	Q06705	408 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	THI3	Q07471	609 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	CIR2	Q08822	631 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	AFT2	Q08957	416 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	SWT1	Q12104	458 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	GET3	Q12154	354 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	RIO1	Q12196	484 aa	Known RBP	4.23	□□□□□ -1.73
RTA1	YGR213C	COX17	Q12287	69 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	PCD1	Q12524	340 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	YBL111C	Q3E7Y5	667 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	RPO31	P04051	1460 aa		4.23	□□□□□ -1.73
RTA1	YGR213C	CDC37	P06101	506 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	TPM1	P17536	199 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	YAP1	P19880	650 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	SUI2	P20459	304 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	YME2	P32843	850 aa		4.22	□□□□□ -1.73
RTA1	YGR213C	RRN3	P36070	627 aa		4.22	□□□□□ -1.73
RTA1	YGR213C	YIL161W	P40449	235 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	CTF18	P49956	741 aa		4.22	□□□□□ -1.73
RTA1	YGR213C	ORC5	P50874	479 aa		4.22	□□□□□ -1.73
RTA1	YGR213C	COP1	P53622	1201 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	ADE16	P54113	591 aa	Known RBP	4.22	□□□□□ -1.73
RTA1	YGR213C	RNH1	Q04740	348 aa		4.22	□□□□□ -1.73
RTA1	YGR213C	YLR419W	Q06698	1435 aa	Known RBP	4.21	□□□□□ -1.73
RTA1	YGR213C	SMC4	Q12267	1418 aa		4.21	□□□□□ -1.73
RTA1	YGR213C	TY2A-LR1	P0C2J4	438 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	TY2A-F	P0CX61	438 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	TY2A-GR2	P0CX62	438 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	PMS1	P14242	873 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	TY2A-C	P25383	438 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	JNM1	P36224	373 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	UBP13	P38187	747 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	CFD1	P40558	293 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	YJL107C	P42947	387 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	BNA1	P47096	177 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	RAD17	P48581	401 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	NUP84	P52891	726 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	RRT6	P53117	311 aa	Predicted RBP	4.21	□□□□□ -1.74
RTA1	YGR213C	DCP2	P53550	970 aa	Known RBP	4.21	□□□□□ -1.74
RTA1	YGR213C	REX2	P54964	269 aa	Known RBP	4.21	□□□□□ -1.74
RTA1	YGR213C	TY2A-DR2	Q03483	438 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	INP2	Q03824	705 aa		4.21	□□□□□ -1.74
RTA1	YGR213C	ECM11	Q04110	302 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms