RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W YBR225WP38321 900 aa3.82□□□□□ -1.8
PTI1YGR156W RMD8P43620 662 aa3.82□□□□□ -1.8
PTI1YGR156W ZAP1P47043 880 aa3.82□□□□□ -1.8
PTI1YGR156W PIL1P53252 339 aaKnown RBP3.82□□□□□ -1.8
PTI1YGR156W RBG2P53295 368 aaKnown RBP3.82□□□□□ -1.8
PTI1YGR156W ARE2P53629 642 aaKnown RBP3.82□□□□□ -1.8
PTI1YGR156W INN1P53901 409 aa3.82□□□□□ -1.8
PTI1YGR156W YSA1Q01976 231 aa3.82□□□□□ -1.8
PTI1YGR156W MAK10Q02197 733 aa3.82□□□□□ -1.8
PTI1YGR156W YPL071CQ02864 156 aa3.82□□□□□ -1.8
PTI1YGR156W MTG1Q03151 367 aaPredicted RBP3.82□□□□□ -1.8
PTI1YGR156W MUB1Q03162 620 aa3.82□□□□□ -1.8
PTI1YGR156W ATG23Q06671 453 aa3.82□□□□□ -1.8
PTI1YGR156W PSK2Q08217 1101 aa3.82□□□□□ -1.8
PTI1YGR156W NBP2Q12163 236 aa3.82□□□□□ -1.8
PTI1YGR156W HER1Q12276 1246 aa3.82□□□□□ -1.8
PTI1YGR156W Q0010Q9ZZX9 128 aa3.82□□□□□ -1.8
PTI1YGR156W CHC1P22137 1653 aaKnown RBP3.81□□□□□ -1.8
PTI1YGR156W CAT8P39113 1433 aa3.81□□□□□ -1.8
PTI1YGR156W CET1O13297 549 aaPredicted RBP3.81□□□□□ -1.8
PTI1YGR156W YMR085WP0CF18 432 aa3.81□□□□□ -1.8
PTI1YGR156W SPO16P17122 198 aa3.81□□□□□ -1.8
PTI1YGR156W SGF29P25554 259 aa3.81□□□□□ -1.8
PTI1YGR156W LRE1P25579 583 aaKnown RBP3.81□□□□□ -1.8
PTI1YGR156W ARO9P38840 513 aaPredicted RBP3.81□□□□□ -1.8
PTI1YGR156W TDA10P42938 290 aa3.81□□□□□ -1.8
PTI1YGR156W AAD10P47182 288 aa3.81□□□□□ -1.8
PTI1YGR156W ASE1P50275 885 aa3.81□□□□□ -1.8
PTI1YGR156W DUO1P53168 247 aaKnown RBP3.81□□□□□ -1.8
PTI1YGR156W TAF11Q04226 346 aa3.81□□□□□ -1.8
PTI1YGR156W CRF1Q04930 467 aa3.81□□□□□ -1.8
PTI1YGR156W SPN1Q06505 410 aaPredicted RBP3.81□□□□□ -1.8
PTI1YGR156W NMD4Q12129 218 aa3.81□□□□□ -1.8
PTI1YGR156W YLR111WQ12528 110 aa3.81□□□□□ -1.8
PTI1YGR156W PNO1Q99216 274 aaKnown RBP3.81□□□□□ -1.8
PTI1YGR156W AAC1P04710 309 aa3.8□□□□□ -1.8
PTI1YGR156W AMD2P22580 549 aa3.8□□□□□ -1.8
PTI1YGR156W SWC3P31376 625 aa3.8□□□□□ -1.8
PTI1YGR156W NUP120P35729 1037 aa3.8□□□□□ -1.8
PTI1YGR156W YMR124WP39523 943 aaKnown RBP3.8□□□□□ -1.8
PTI1YGR156W UBP7P40453 1071 aa3.8□□□□□ -1.8
PTI1YGR156W YIL024CP40543 189 aa3.8□□□□□ -1.8
PTI1YGR156W LYS14P40971 790 aa3.8□□□□□ -1.8
PTI1YGR156W IRC7P43623 340 aa3.8□□□□□ -1.8
PTI1YGR156W YNL058CP53947 316 aa3.8□□□□□ -1.8
PTI1YGR156W TIM10P87108 93 aa3.8□□□□□ -1.8
PTI1YGR156W REG1Q00816 1014 aa3.8□□□□□ -1.8
PTI1YGR156W SPC19Q03954 165 aa3.8□□□□□ -1.8
PTI1YGR156W VIP1Q06685 1146 aaKnown RBP3.8□□□□□ -1.8
PTI1YGR156W TMA16Q08687 178 aa3.8□□□□□ -1.8
PTI1YGR156W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
PTI1YGR156W YPL272CQ08984 517 aa3.8□□□□□ -1.8
PTI1YGR156W PGA3Q12746 312 aaKnown RBP3.8□□□□□ -1.8
PTI1YGR156W YLR302CO13544 120 aa3.79□□□□□ -1.8
PTI1YGR156W CHO2P05374 869 aaKnown RBP3.79□□□□□ -1.8
PTI1YGR156W SUI3P09064 285 aaKnown RBP3.79□□□□□ -1.8
PTI1YGR156W CDC24P11433 854 aaPredicted RBP3.79□□□□□ -1.8
PTI1YGR156W KAR3P17119 729 aa3.79□□□□□ -1.8
PTI1YGR156W PDE1P22434 369 aa3.79□□□□□ -1.8
PTI1YGR156W GCD7P32502 381 aaPredicted RBP3.79□□□□□ -1.8
PTI1YGR156W FLC2P39719 783 aa3.79□□□□□ -1.8
PTI1YGR156W TPA1P40032 644 aaKnown RBP3.79□□□□□ -1.8
PTI1YGR156W SLZ1P40167 298 aa3.79□□□□□ -1.8
PTI1YGR156W CFD1P40558 293 aa3.79□□□□□ -1.8
PTI1YGR156W SAE2P46946 345 aa3.79□□□□□ -1.8
PTI1YGR156W VPS75P53853 264 aa3.79□□□□□ -1.8
PTI1YGR156W MRPL19P53875 158 aa3.79□□□□□ -1.8
PTI1YGR156W STP3Q05937 343 aa3.79□□□□□ -1.8
PTI1YGR156W UTP21Q06078 939 aaPredicted RBP3.79□□□□□ -1.8
PTI1YGR156W ENT4Q07872 247 aa3.79□□□□□ -1.8
PTI1YGR156W SWT1Q12104 458 aa3.79□□□□□ -1.8
PTI1YGR156W SKM1Q12469 655 aa3.79□□□□□ -1.8
PTI1YGR156W YSP3P25036 478 aa3.78□□□□□ -1.8
PTI1YGR156W SRB5P32585 307 aa3.78□□□□□ -1.8
PTI1YGR156W HES1P35843 434 aa3.78□□□□□ -1.8
PTI1YGR156W YAT2P40017 923 aa3.78□□□□□ -1.8
PTI1YGR156W PHM8P40025 321 aa3.78□□□□□ -1.8
PTI1YGR156W MAM1P40065 302 aa3.78□□□□□ -1.8
PTI1YGR156W YIL161WP40449 235 aaKnown RBP3.78□□□□□ -1.8
PTI1YGR156W SKP2P42843 763 aa3.78□□□□□ -1.8
PTI1YGR156W VTC2P43585 828 aa3.78□□□□□ -1.8
PTI1YGR156W MSY1P48527 492 aa3.78□□□□□ -1.8
PTI1YGR156W INA17Q02888 182 aa3.78□□□□□ -1.8
PTI1YGR156W MFB1Q04922 465 aa3.78□□□□□ -1.8
PTI1YGR156W BUD7Q08754 746 aa3.78□□□□□ -1.8
PTI1YGR156W NUS1Q12063 375 aa3.78□□□□□ -1.8
PTI1YGR156W BAG7Q12128 409 aa3.78□□□□□ -1.8
PTI1YGR156W TAH18Q12181 623 aa3.78□□□□□ -1.8
PTI1YGR156W LCB4Q12246 624 aa3.78□□□□□ -1.8
PTI1YGR156W AHA1Q12449 350 aaKnown RBP3.78□□□□□ -1.8
PTI1YGR156W ERG27Q12452 347 aaKnown RBP3.78□□□□□ -1.8
PTI1YGR156W GCN4P03069 281 aa3.77□□□□□ -1.81
PTI1YGR156W YPK1P12688 680 aaKnown RBP3.77□□□□□ -1.81
PTI1YGR156W YCK1P23291 538 aa3.77□□□□□ -1.81
PTI1YGR156W ALY1P36117 915 aa3.77□□□□□ -1.81
PTI1YGR156W ERC1P38767 581 aa3.77□□□□□ -1.81
PTI1YGR156W UTP9P38882 575 aaKnown RBP3.77□□□□□ -1.81
PTI1YGR156W DJP1P40564 432 aa3.77□□□□□ -1.81
PTI1YGR156W RPN11P43588 306 aaKnown RBP3.77□□□□□ -1.81
PTI1YGR156W YLR287CQ05881 355 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms