RNA–Protein interactions for RNA: YGR041W

BUD9, Transcript of Protein involved in bud-site selection, yeast

Gene BUD9, Length 1,644 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD9	YGR041W	RRP43	P25359	394 aa	Predicted RBP	6.59	□□□□□ -1.35
BUD9	YGR041W	PRD1	P25375	712 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	SUR1	P33300	382 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	LTV1	P34078	463 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	TAT1	P38085	619 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	MUP3	P38734	546 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	OSW5	P40219	148 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	COS12	P53053	380 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	MNP1	P53163	194 aa	Predicted RBP	6.59	□□□□□ -1.35
BUD9	YGR041W	ALF1	P53904	254 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	RPA49	Q01080	415 aa	Predicted RBP	6.59	□□□□□ -1.35
BUD9	YGR041W	TAP42	Q04372	366 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.59	□□□□□ -1.35	not detected
BUD9	YGR041W	BMS1	Q08965	1183 aa	Known RBP	6.59	□□□□□ -1.35
BUD9	YGR041W	SWT1	Q12104	458 aa		6.59	□□□□□ -1.35
BUD9	YGR041W	OM45	P16547	393 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	PRP4	P20053	465 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	STE14	P32584	239 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	ADH5	P38113	351 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	CCT6	P39079	546 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	PEX7	P39108	375 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	YJL193W	P39542	402 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	URM1	P40554	99 aa	Predicted RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	HEF3	P53978	1044 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	KAP120	Q02932	1032 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	DON1	Q05610	365 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	VPS38	Q05919	439 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	DBP9	Q06218	594 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	TRE1	Q08919	783 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	HER1	Q12276	1246 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	DNF3	Q12674	1656 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	APN1	P22936	367 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	YIH1	P25637	258 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	GEX2	P36173	615 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	VPS45	P38932	577 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
BUD9	YGR041W	GTS1	P40956	396 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	VMA13	P41807	478 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	YGR111W	P53265	400 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	RCM1	P53972	490 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	PRO2	P54885	456 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	YDR239C	Q03780	787 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	SOV1	Q04748	898 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	PHO92	Q06390	306 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	APL5	Q08951	932 aa	Known RBP	6.58	□□□□□ -1.36
BUD9	YGR041W	SEC39	Q12745	709 aa		6.58	□□□□□ -1.36
BUD9	YGR041W	RPP2A	P05319	106 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	TUB3	P09734	445 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	PCT1	P13259	424 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	ERG6	P25087	383 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	URK1	P27515	501 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	SEF1	P34228	1148 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	CMC1	P36064	111 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	AGP2	P38090	596 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	PCH2	P38126	564 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	MSS4	P38994	779 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	LRO1	P40345	661 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	PKP1	P40530	394 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	MKT1	P40850	830 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	DLD2	P46681	530 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	LYS4	P49367	693 aa	Predicted RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	SHE4	P51534	789 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	VID30	P53076	958 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	MAK10	Q02197	733 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	BUD22	Q04347	519 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	HOF1	Q05080	669 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	AVL9	Q12500	764 aa		6.57	□□□□□ -1.36
BUD9	YGR041W	HRP1	Q99383	534 aa	Known RBP	6.57	□□□□□ -1.36
BUD9	YGR041W	SIR4	P11978	1358 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	PSK1	P31374	1356 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	YBR085C-A	O43137	85 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	GRR1	P24814	1151 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	CDC15	P27636	974 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	SRB5	P32585	307 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	PTC7	P38797	343 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	YJL206C	P39529	758 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	AFG3	P39925	761 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	MRX1	P40050	688 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	OYE3	P41816	400 aa	Predicted RBP	6.56	□□□□□ -1.36
BUD9	YGR041W	TWF1	P53250	332 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	PDR16	P53860	351 aa	Known RBP	6.56	□□□□□ -1.36
BUD9	YGR041W	RBA50	Q04418	439 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	PML1	Q07930	204 aa	Predicted RBP	6.56	□□□□□ -1.36
BUD9	YGR041W	GAS5	Q08193	484 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	DCI1	Q08558	271 aa		6.56	□□□□□ -1.36
BUD9	YGR041W	CFT2	Q12102	859 aa	Predicted RBP	6.56	□□□□□ -1.36
BUD9	YGR041W	RPL1A	P0CX43	217 aa	Known RBP	6.55	□□□□□ -1.36
BUD9	YGR041W	RPL1B	P0CX44	217 aa	Known RBP	6.55	□□□□□ -1.36
BUD9	YGR041W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.55	□□□□□ -1.36	not detected
BUD9	YGR041W	VPS34	P22543	875 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	LRE1	P25579	583 aa	Known RBP	6.55	□□□□□ -1.36
BUD9	YGR041W	DSS4	P32601	143 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	YSW1	P38280	609 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	RRT2	P38332	387 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	GET2	P40056	285 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	ALT2	P52892	507 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	YGL036W	P53185	909 aa	Predicted RBP	6.55	□□□□□ -1.36
BUD9	YGR041W	ARP5	P53946	755 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	ATG23	Q06671	453 aa		6.55	□□□□□ -1.36
BUD9	YGR041W	NOP6	Q07623	225 aa	Known RBP	6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms