RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSE1	YGL238W	ADE16	P54113	591 aa	Known RBP	0.62	□□□□□ -2.31
CSE1	YGL238W	TGL2	P54857	326 aa		0.62	□□□□□ -2.31
CSE1	YGL238W	ADE13	Q05911	482 aa	Known RBP	0.62	□□□□□ -2.31
CSE1	YGL238W	YPR027C	Q12079	277 aa		0.62	□□□□□ -2.31
CSE1	YGL238W	TMS1	Q12116	473 aa		0.62	□□□□□ -2.31
CSE1	YGL238W	RRP6	Q12149	733 aa	Known RBP	0.62	□□□□□ -2.31
CSE1	YGL238W	USO1	P25386	1790 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	SPO14	P36126	1683 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	MMS22	Q06164	1454 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	TY1B-NL2	Q99337	1749 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	EDE1	P34216	1381 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	HEM2	P05373	342 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	PDA1	P16387	420 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	MCK1	P21965	375 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	PDE1	P22434	369 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	LRE1	P25579	583 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	UBP13	P38187	747 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	YBR071W	P38243	211 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	STT3	P39007	718 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	RPH1	P39956	796 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	RPT2	P40327	437 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	IDS2	P46958	469 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	IMA1	P53051	589 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	CNM67	P53865	581 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	CTL1	Q03220	320 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	RBA50	Q04418	439 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	PEX15	Q08215	383 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	ERV2	Q12284	196 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	YCL021W-A	Q96VH3	125 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	BCK1	Q01389	1478 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	BUD3	P25558	1636 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	GDB1	Q06625	1536 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	VAS1	P07806	1104 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	RPS7A	P26786	190 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	ARP2	P32381	391 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	ERG1	P32476	496 aa	Known RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	YIL060W	P40519	144 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	SMK1	P41808	388 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	CTK2	P46962	323 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	YNL034W	P53963	612 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	BNA5	Q05979	453 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	UTP21	Q06078	939 aa	Predicted RBP	0.61	□□□□□ -2.31
CSE1	YGL238W	THI20	Q08224	551 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	ATG9	Q12142	997 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	PSF3	Q12146	194 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	ATG2	P53855	1592 aa		0.61	□□□□□ -2.31
CSE1	YGL238W	ARO1	P08566	1588 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	NAT1	P12945	854 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	GAC1	P28006	793 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	TGL1	P34163	548 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	RPS10B	P46784	105 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	RTT101	P47050	842 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	DRN1	P53255	507 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	ORC1	P54784	914 aa	Predicted RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	TRM732	Q03496	1420 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	ARP10	Q04549	284 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	BRE1	Q07457	700 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	VAM6	Q07468	1049 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	HOS1	Q12214	470 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	VPS15	P22219	1454 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	DRS2	P39524	1355 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	GDH1	P07262	454 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	ILV2	P07342	687 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	SIR1	P21691	654 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	RFA2	P26754	273 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	MIA40	P36046	403 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	AAP1	P37898	856 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	SCS2	P40075	244 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	SIM1	P40472	476 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	YGR237C	P50089	785 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	PYK2	P52489	506 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	SGF73	P53165	657 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	NOP7	P53261	605 aa	Known RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	TMC1	Q08422	150 aa	Predicted RBP	0.6	□□□□□ -2.31
CSE1	YGL238W	AYT1	Q12226	474 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	RMP1	Q12530	201 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	PAN1	P32521	1480 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	STU1	P38198	1513 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	CAT8	P39113	1433 aa		0.6	□□□□□ -2.31
CSE1	YGL238W	PGS1	P25578	521 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	TRS65	P32893	560 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	SIP2	P34164	415 aa	Known RBP	0.59	□□□□□ -2.31
CSE1	YGL238W	ADE17	P38009	592 aa	Known RBP	0.59	□□□□□ -2.31
CSE1	YGL238W	PAF1	P38351	445 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	ERG7	P38604	731 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	UBA4	P38820	440 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	UBP12	P39538	1254 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	REE1	P40893	198 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	CTF18	P49956	741 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	ATG23	Q06671	453 aa		0.59	□□□□□ -2.31
CSE1	YGL238W	RRP12	Q12754	1228 aa	Known RBP	0.59	□□□□□ -2.31
CSE1	YGL238W	SAC1	P32368	623 aa	Known RBP	0.59	□□□□□ -2.32
CSE1	YGL238W	YEL045C	P32616	141 aa		0.59	□□□□□ -2.32
CSE1	YGL238W	SRO77	P38163	1010 aa		0.59	□□□□□ -2.32
CSE1	YGL238W	DJP1	P40564	432 aa		0.59	□□□□□ -2.32
CSE1	YGL238W	YJL213W	P40896	331 aa		0.59	□□□□□ -2.32
CSE1	YGL238W	YFR016C	P43597	1233 aa	Known RBP	0.59	□□□□□ -2.32
CSE1	YGL238W	UBX6	P47049	396 aa		0.59	□□□□□ -2.32
CSE1	YGL238W	MDR1	P53258	950 aa		0.59	□□□□□ -2.32
CSE1	YGL238W	VPS64	Q03944	604 aa		0.59	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms