RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	SKS1	Q12505	502 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	AFI1	Q99222	893 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	CHO2	P05374	869 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	STE4	P18851	423 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	ERG4	P25340	473 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	TCD2	P36101	447 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	AIM3	P38266	947 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	KSP1	P38691	1029 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	SEC31	P38968	1273 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	AFG3	P39925	761 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	BUR6	P40096	142 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	LAS21	P40367	830 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	IRC8	P47046	822 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	UBX6	P47049	396 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	MCM6	P53091	1017 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	RIM8	P53179	542 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	ATG4	P53867	494 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	UBP16	Q02863	499 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	YDR109C	Q04585	715 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	CRT10	Q08226	957 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	NFI1	Q12216	726 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	GPM3	Q12326	303 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	CLC1	P17891	233 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	ADH7	P25377	361 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	ERV1	P27882	189 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	SEC66	P33754	206 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	VMA13	P41807	478 aa	Known RBP	4.2	□□□□□ -1.74
SPB4	YFL002C	MAF1	P41910	395 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	SAE2	P46946	345 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	RSM28	Q03430	361 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	FIN1	Q03898	291 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	RPC11	Q04307	110 aa	Predicted RBP	4.2	□□□□□ -1.74
SPB4	YFL002C	ARG7	Q04728	441 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	SOV1	Q04748	898 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	SPE3	Q12074	293 aa	Known RBP	4.2	□□□□□ -1.74
SPB4	YFL002C	FRE6	Q12473	712 aa		4.2	□□□□□ -1.74
SPB4	YFL002C	MF(ALPHA)1	P01149	165 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	TRX1	P22217	103 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	SSE2	P32590	693 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	SEF1	P34228	1148 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	MNN2	P38069	597 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	DIA4	P38705	446 aa	Predicted RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	MEP1	P40260	492 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	HXT14	P42833	540 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	RPN11	P43588	306 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	DLD2	P46681	530 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	RPS7B	P48164	190 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	EOS1	P53938	366 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	MAK10	Q02197	733 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	YDR341C	Q05506	607 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	VTA1	Q06263	330 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	YDL073W	Q07454	984 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SPB4	YFL002C	BMS1	Q08965	1183 aa	Known RBP	4.19	□□□□□ -1.74
SPB4	YFL002C	LCB4	Q12246	624 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	SEC39	Q12745	709 aa		4.19	□□□□□ -1.74
SPB4	YFL002C	STF1	P01098	86 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	ALG7	P07286	448 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	PCT1	P13259	424 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	PDA1	P16387	420 aa	Known RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	LAC1	P28496	418 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	PIH1	P38768	344 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	MTG2	P38860	518 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	UIP3	P39547	235 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	PHM8	P40025	321 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	ALG5	P40350	334 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	IRC24	P40580	263 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	CAK1	P43568	368 aa	Predicted RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	INP52	P50942	1183 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	HOS2	P53096	452 aa	Predicted RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	CUL3	P53202	744 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	ADE16	P54113	591 aa	Known RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	RNT1	Q02555	471 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	YPL107W	Q02873	248 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	KAP120	Q02932	1032 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	TRS23	Q03784	219 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	RSF1	Q05043	376 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	HSP42	Q12329	375 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	LAM4	P38800	1345 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	HXK2	P04807	486 aa	Known RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	PMA1	P05030	918 aa	Known RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	PRD1	P25375	712 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	BUD14	P27637	709 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	TFB1	P32776	642 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	TIF3	P34167	436 aa	Known RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	TOD6	P34219	525 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	SWH1	P35845	1188 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	LAS1	P36146	502 aa	Predicted RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	RRF1	P38771	230 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	EFM4	P40516	257 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	IMD4	P50094	524 aa	Known RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	DIA3	P52290	468 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	IST1	P53843	298 aa	Predicted RBP	4.18	□□□□□ -1.74
SPB4	YFL002C	EFM6	P53970	246 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	SEC5	P89102	971 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	CDA2	Q06703	312 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	RLM1	Q12224	676 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	Q0010	Q9ZZX9	128 aa		4.18	□□□□□ -1.74
SPB4	YFL002C	SNT1	P25357	1226 aa		4.17	□□□□□ -1.74
SPB4	YFL002C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms