RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	CKA2	P19454	339 aa		7.47	□□□□□ -1.21
URH1	YDR400W	RTT107	P38850	1070 aa		7.47	□□□□□ -1.21
URH1	YDR400W	KEL1	P38853	1164 aa	Known RBP	7.47	□□□□□ -1.21
URH1	YDR400W	VPS45	P38932	577 aa		7.47	□□□□□ -1.21
URH1	YDR400W	SMK1	P41808	388 aa		7.47	□□□□□ -1.21
URH1	YDR400W	IMA1	P53051	589 aa		7.47	□□□□□ -1.21
URH1	YDR400W	ALF1	P53904	254 aa		7.47	□□□□□ -1.21
URH1	YDR400W	SVL3	Q03088	825 aa	Known RBP	7.47	□□□□□ -1.21
URH1	YDR400W	COG4	Q06096	861 aa		7.47	□□□□□ -1.21
URH1	YDR400W	VIP1	Q06685	1146 aa	Known RBP	7.47	□□□□□ -1.21
URH1	YDR400W	CDC37	P06101	506 aa	Known RBP	7.46	□□□□□ -1.22
URH1	YDR400W	PET111	P08468	800 aa		7.46	□□□□□ -1.22
URH1	YDR400W	MTF2	P10849	440 aa		7.46	□□□□□ -1.22
URH1	YDR400W	YCR061W	P25639	631 aa		7.46	□□□□□ -1.22
URH1	YDR400W	STV1	P37296	890 aa		7.46	□□□□□ -1.22
URH1	YDR400W	YPT10	P38146	199 aa		7.46	□□□□□ -1.22
URH1	YDR400W	TIF4631	P39935	952 aa	Known RBP	7.46	□□□□□ -1.22
URH1	YDR400W	IML2	P47031	731 aa		7.46	□□□□□ -1.22
URH1	YDR400W	BNI5	P53890	448 aa	Known RBP	7.46	□□□□□ -1.22
URH1	YDR400W	SUB1	P54000	292 aa	Known RBP	7.46	□□□□□ -1.22
URH1	YDR400W	CSM3	Q04659	317 aa		7.46	□□□□□ -1.22
URH1	YDR400W	SUE1	Q06524	206 aa		7.46	□□□□□ -1.22
URH1	YDR400W	YOL075C	Q08234	1294 aa		7.46	□□□□□ -1.22
URH1	YDR400W	YPK1	P12688	680 aa	Known RBP	7.45	□□□□□ -1.22
URH1	YDR400W	PSO2	P30620	661 aa		7.45	□□□□□ -1.22
URH1	YDR400W	CDC5	P32562	705 aa		7.45	□□□□□ -1.22
URH1	YDR400W	LOT5	P34234	306 aa		7.45	□□□□□ -1.22
URH1	YDR400W	IFA38	P38286	347 aa		7.45	□□□□□ -1.22
URH1	YDR400W	EFM2	P38347	419 aa		7.45	□□□□□ -1.22
URH1	YDR400W	PIH1	P38768	344 aa		7.45	□□□□□ -1.22
URH1	YDR400W	FYV8	P46949	817 aa	Known RBP	7.45	□□□□□ -1.22
URH1	YDR400W	SAP4	P53036	818 aa		7.45	□□□□□ -1.22
URH1	YDR400W	YGR117C	P53270	476 aa		7.45	□□□□□ -1.22
URH1	YDR400W	ATG21	Q02887	496 aa		7.45	□□□□□ -1.22
URH1	YDR400W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	7.45	□□□□□ -1.22	not detected
URH1	YDR400W	TGS1	Q12052	315 aa		7.45	□□□□□ -1.22
URH1	YDR400W	ATG9	Q12142	997 aa		7.45	□□□□□ -1.22
URH1	YDR400W	STE12	P13574	688 aa		7.44	□□□□□ -1.22
URH1	YDR400W	UBC1	P21734	215 aa	Known RBP	7.44	□□□□□ -1.22
URH1	YDR400W	DMC1	P25453	334 aa		7.44	□□□□□ -1.22
URH1	YDR400W	SAS3	P34218	831 aa		7.44	□□□□□ -1.22
URH1	YDR400W	FSH1	P38777	243 aa	Known RBP	7.44	□□□□□ -1.22
URH1	YDR400W	GAA1	P39012	614 aa		7.44	□□□□□ -1.22
URH1	YDR400W	FAF1	P40546	346 aa	Predicted RBP	7.44	□□□□□ -1.22
URH1	YDR400W	BNA1	P47096	177 aa		7.44	□□□□□ -1.22
URH1	YDR400W	VPS4	P52917	437 aa		7.44	□□□□□ -1.22
URH1	YDR400W	CBK1	P53894	756 aa		7.44	□□□□□ -1.22
URH1	YDR400W	VPS38	Q05919	439 aa		7.44	□□□□□ -1.22
URH1	YDR400W	YDL073W	Q07454	984 aa		7.44	□□□□□ -1.22
URH1	YDR400W	SUL2	Q12325	893 aa		7.44	□□□□□ -1.22
URH1	YDR400W	EMP70	P32802	667 aa		7.43	□□□□□ -1.22
URH1	YDR400W	XRS2	P33301	854 aa		7.43	□□□□□ -1.22
URH1	YDR400W	NDT80	P38830	627 aa		7.43	□□□□□ -1.22
URH1	YDR400W	ARO9	P38840	513 aa	Predicted RBP	7.43	□□□□□ -1.22
URH1	YDR400W	ASN1	P49089	572 aa	Known RBP	7.43	□□□□□ -1.22
URH1	YDR400W	VPS73	P53142	486 aa	Known RBP	7.43	□□□□□ -1.22
URH1	YDR400W	TAM41	P53230	385 aa		7.43	□□□□□ -1.22
URH1	YDR400W	CAF130	P53280	1122 aa	Predicted RBP	7.43	□□□□□ -1.22
URH1	YDR400W	LSB1	P53281	241 aa		7.43	□□□□□ -1.22
URH1	YDR400W	TRM44	Q02648	567 aa	Known RBP	7.43	□□□□□ -1.22
URH1	YDR400W	FUS2	Q05670	677 aa		7.43	□□□□□ -1.22
URH1	YDR400W	TLG2	Q08144	397 aa		7.43	□□□□□ -1.22
URH1	YDR400W	NEW1	Q08972	1196 aa	Known RBP	7.43	□□□□□ -1.22
URH1	YDR400W	SMC6	Q12749	1114 aa		7.43	□□□□□ -1.22
URH1	YDR400W	TPK2	P06245	380 aa		7.42	□□□□□ -1.22
URH1	YDR400W	SSH4	P32343	579 aa		7.42	□□□□□ -1.22
URH1	YDR400W	BST1	P43571	1029 aa		7.42	□□□□□ -1.22
URH1	YDR400W	RRT6	P53117	311 aa	Predicted RBP	7.42	□□□□□ -1.22
URH1	YDR400W	SOL4	P53315	255 aa		7.42	□□□□□ -1.22
URH1	YDR400W	BOP3	P53958	396 aa		7.42	□□□□□ -1.22
URH1	YDR400W	AIM33	Q04516	312 aa		7.42	□□□□□ -1.22
URH1	YDR400W	YDL121C	Q07541	149 aa		7.42	□□□□□ -1.22
URH1	YDR400W	IRC10	Q08118	586 aa		7.42	□□□□□ -1.22
URH1	YDR400W	YAP7	Q08182	245 aa		7.42	□□□□□ -1.22
URH1	YDR400W	TCO89	Q08921	799 aa		7.42	□□□□□ -1.22
URH1	YDR400W	SFI1	Q12369	946 aa		7.42	□□□□□ -1.22
URH1	YDR400W	ZPS1	Q12512	249 aa		7.42	□□□□□ -1.22
URH1	YDR400W	PET122	P10355	254 aa		7.41	□□□□□ -1.22
URH1	YDR400W	KRS1	P15180	591 aa	Known RBP	7.41	□□□□□ -1.22
URH1	YDR400W	SPO12	P17123	173 aa		7.41	□□□□□ -1.22
URH1	YDR400W	TDP1	P38319	544 aa		7.41	□□□□□ -1.22
URH1	YDR400W	MUP3	P38734	546 aa		7.41	□□□□□ -1.22
URH1	YDR400W	TCD1	P38756	429 aa		7.41	□□□□□ -1.22
URH1	YDR400W	SPT8	P38915	602 aa		7.41	□□□□□ -1.22
URH1	YDR400W	APT1	P49435	187 aa	Known RBP	7.41	□□□□□ -1.22
URH1	YDR400W	COQ6	P53318	479 aa		7.41	□□□□□ -1.22
URH1	YDR400W	YNL092W	P53934	400 aa		7.41	□□□□□ -1.22
URH1	YDR400W	YPL108W	Q02872	168 aa	Predicted RBP	7.41	□□□□□ -1.22
URH1	YDR400W	VPS60	Q03390	229 aa		7.41	□□□□□ -1.22
URH1	YDR400W	ARP6	Q12509	438 aa		7.41	□□□□□ -1.22
URH1	YDR400W	CBP1	P07252	654 aa		7.4	□□□□□ -1.22
URH1	YDR400W	PET123	P17558	318 aa		7.4	□□□□□ -1.22
URH1	YDR400W	HPR1	P17629	752 aa	Known RBP	7.4	□□□□□ -1.22
URH1	YDR400W	RRP43	P25359	394 aa	Predicted RBP	7.4	□□□□□ -1.22
URH1	YDR400W	RPC25	P35718	212 aa		7.4	□□□□□ -1.22
URH1	YDR400W	SEC9	P40357	651 aa		7.4	□□□□□ -1.22
URH1	YDR400W	SHQ1	P40486	507 aa	Predicted RBP	7.4	□□□□□ -1.22
URH1	YDR400W	EFM4	P40516	257 aa		7.4	□□□□□ -1.22
URH1	YDR400W	FMS1	P50264	508 aa		7.4	□□□□□ -1.22
URH1	YDR400W	YGL117W	P53133	265 aa		7.4	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms