RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YER034WP40022 185 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W LSM5P40089 93 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W FMP10P40098 244 aa1.41□□□□□ -2.18
MSN5YDR335W GCV1P48015 400 aa1.41□□□□□ -2.18
MSN5YDR335W TAF4P50105 388 aa1.41□□□□□ -2.18
MSN5YDR335W YGR117CP53270 476 aa1.41□□□□□ -2.18
MSN5YDR335W YGR250CP53316 781 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W HDA1P53973 706 aa1.41□□□□□ -2.18
MSN5YDR335W SSL2Q00578 843 aa1.41□□□□□ -2.18
MSN5YDR335W MAK10Q02197 733 aa1.41□□□□□ -2.18
MSN5YDR335W PNG1Q02890 363 aa1.41□□□□□ -2.18
MSN5YDR335W MLH2Q07980 695 aa1.41□□□□□ -2.18
MSN5YDR335W BTS1Q12051 335 aa1.41□□□□□ -2.18
MSN5YDR335W TY3A-GQ12173 290 aa1.41□□□□□ -2.18
MSN5YDR335W RPN5Q12250 445 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W TY3A-IQ99219 290 aa1.41□□□□□ -2.18
MSN5YDR335W YSP2Q06681 1438 aa1.41□□□□□ -2.18
MSN5YDR335W LAM4P38800 1345 aa1.41□□□□□ -2.18
MSN5YDR335W SNF5P18480 905 aa1.41□□□□□ -2.18
MSN5YDR335W SIR1P21691 654 aa1.41□□□□□ -2.18
MSN5YDR335W SPC110P32380 944 aa1.41□□□□□ -2.18
MSN5YDR335W DPH5P32469 300 aaPredicted RBP1.41□□□□□ -2.18
MSN5YDR335W PUB1P32588 453 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
MSN5YDR335W SLA2P33338 968 aa1.41□□□□□ -2.18
MSN5YDR335W EHT1P38295 451 aa1.41□□□□□ -2.18
MSN5YDR335W GIC1P38785 314 aa1.41□□□□□ -2.18
MSN5YDR335W CTM1P38818 585 aa1.41□□□□□ -2.18
MSN5YDR335W YEL057CP39983 233 aa1.41□□□□□ -2.18
MSN5YDR335W TAH11P47112 604 aa1.41□□□□□ -2.18
MSN5YDR335W PRP31P49704 494 aaPredicted RBP1.41□□□□□ -2.18
MSN5YDR335W MPP6P53725 186 aaPredicted RBP1.41□□□□□ -2.18
MSN5YDR335W YNR071CP53757 342 aa1.41□□□□□ -2.18
MSN5YDR335W ARP4P80428 489 aa1.41□□□□□ -2.18
MSN5YDR335W YML119WQ03208 357 aa1.41□□□□□ -2.18
MSN5YDR335W DON1Q05610 365 aa1.41□□□□□ -2.18
MSN5YDR335W MRD1Q06106 887 aaKnown RBP1.41□□□□□ -2.18
MSN5YDR335W YLR413WQ06689 675 aa1.41□□□□□ -2.18
MSN5YDR335W BUD7Q08754 746 aa1.41□□□□□ -2.18
MSN5YDR335W HER1Q12276 1246 aa1.41□□□□□ -2.18
MSN5YDR335W GLE1Q12315 538 aa1.41□□□□□ -2.18
MSN5YDR335W CET1O13297 549 aaPredicted RBP1.4□□□□□ -2.19
MSN5YDR335W CPA2P03965 1118 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W STE3P06783 470 aa1.4□□□□□ -2.19
MSN5YDR335W CAR2P07991 424 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W APE1P14904 514 aa1.4□□□□□ -2.19
MSN5YDR335W FRS1P15624 595 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W OSM1P21375 501 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W RPI1P23250 407 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W PRD1P25375 712 aa1.4□□□□□ -2.19
MSN5YDR335W NTG1P31378 399 aa1.4□□□□□ -2.19
MSN5YDR335W NIP1P32497 812 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W TOD6P34219 525 aa1.4□□□□□ -2.19
MSN5YDR335W PHO11P35842 467 aa1.4□□□□□ -2.19
MSN5YDR335W AUR1P36107 401 aaPredicted RBP1.4□□□□□ -2.19
MSN5YDR335W YKR018CP36114 725 aa1.4□□□□□ -2.19
MSN5YDR335W APT2P36973 181 aa1.4□□□□□ -2.19
MSN5YDR335W PHO12P38693 467 aa1.4□□□□□ -2.19
MSN5YDR335W ERC1P38767 581 aa1.4□□□□□ -2.19
MSN5YDR335W RRF1P38771 230 aa1.4□□□□□ -2.19
MSN5YDR335W LYS9P38999 446 aa1.4□□□□□ -2.19
MSN5YDR335W ROK1P45818 564 aaPredicted RBP1.4□□□□□ -2.19
MSN5YDR335W YJR039WP47107 1121 aa1.4□□□□□ -2.19
MSN5YDR335W SHE10P53075 577 aa1.4□□□□□ -2.19
MSN5YDR335W YGR054WP53235 642 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W GRX3Q03835 250 aa1.4□□□□□ -2.19
MSN5YDR335W CSI1Q04368 295 aa1.4□□□□□ -2.19
MSN5YDR335W RTN1Q04947 295 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W VPS38Q05919 439 aa1.4□□□□□ -2.19
MSN5YDR335W SNA4Q07549 140 aa1.4□□□□□ -2.19
MSN5YDR335W RVB2Q12464 471 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W NOP58Q12499 511 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W RAD61Q99359 647 aa1.4□□□□□ -2.19
MSN5YDR335W PRB1P09232 635 aa1.4□□□□□ -2.19
MSN5YDR335W LPD1P09624 499 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W KIN2P13186 1147 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W OLE1P21147 510 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W MRP20P32387 263 aa1.4□□□□□ -2.19
MSN5YDR335W YSC84P32793 468 aa1.4□□□□□ -2.19
MSN5YDR335W YME1P32795 747 aa1.4□□□□□ -2.19
MSN5YDR335W MRPL7P36519 292 aa1.4□□□□□ -2.19
MSN5YDR335W FSH1P38777 243 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W SMF1P38925 575 aa1.4□□□□□ -2.19
MSN5YDR335W RRT14P40470 206 aa1.4□□□□□ -2.19
MSN5YDR335W YGL114WP53134 725 aa1.4□□□□□ -2.19
MSN5YDR335W PIB2P53191 635 aa1.4□□□□□ -2.19
MSN5YDR335W TAM41P53230 385 aa1.4□□□□□ -2.19
MSN5YDR335W TOF2Q02208 771 aa1.4□□□□□ -2.19
MSN5YDR335W YVH1Q02256 364 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W ATG38Q05789 226 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W DBP9Q06218 594 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W MMR1Q06324 491 aa1.4□□□□□ -2.19
MSN5YDR335W NOP6Q07623 225 aaKnown RBP1.4□□□□□ -2.19
MSN5YDR335W PSY3Q12318 242 aa1.4□□□□□ -2.19
MSN5YDR335W TRM13Q12383 476 aa1.4□□□□□ -2.19
MSN5YDR335W CYC1P00044 109 aaPredicted RBP1.39□□□□□ -2.19
MSN5YDR335W ILS1P09436 1072 aaKnown RBP1.39□□□□□ -2.19
MSN5YDR335W CDC26P14724 124 aa1.39□□□□□ -2.19
MSN5YDR335W VMA16P23968 213 aa1.39□□□□□ -2.19
MSN5YDR335W ERG6P25087 383 aaKnown RBP1.39□□□□□ -2.19
MSN5YDR335W IDH2P28241 369 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms