RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W NDI1P32340 513 aa1.71□□□□□ -2.14
CFT1YDR301W SSH4P32343 579 aa1.71□□□□□ -2.14
CFT1YDR301W HXT3P32466 567 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W SPT16P32558 1035 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W FRE2P36033 711 aa1.71□□□□□ -2.14
CFT1YDR301W YBR056WP38081 501 aa1.71□□□□□ -2.14
CFT1YDR301W TIF11P38912 153 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W ERG10P41338 398 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W VTC4P47075 721 aa1.71□□□□□ -2.14
CFT1YDR301W TAF6P53040 516 aa1.71□□□□□ -2.14
CFT1YDR301W SPC105P53148 917 aa1.71□□□□□ -2.14
CFT1YDR301W YNR061CP53747 219 aa1.71□□□□□ -2.14
CFT1YDR301W YNL143CP53908 130 aa1.71□□□□□ -2.14
CFT1YDR301W IMP4P53941 290 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W SHE9Q04172 456 aa1.71□□□□□ -2.14
CFT1YDR301W OMS1Q06668 471 aa1.71□□□□□ -2.14
CFT1YDR301W SYT1Q06836 1226 aa1.71□□□□□ -2.14
CFT1YDR301W ACM1Q08981 209 aa1.71□□□□□ -2.14
CFT1YDR301W ATP4P05626 244 aa1.71□□□□□ -2.14
CFT1YDR301W PRT1P06103 763 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W ABF1P14164 731 aa1.71□□□□□ -2.14
CFT1YDR301W EXO70P19658 623 aa1.71□□□□□ -2.14
CFT1YDR301W PRP2P20095 876 aaPredicted RBP1.71□□□□□ -2.14
CFT1YDR301W MGT1P26188 188 aa1.71□□□□□ -2.14
CFT1YDR301W BRF1P29056 596 aa1.71□□□□□ -2.14
CFT1YDR301W TIP20P33891 701 aa1.71□□□□□ -2.14
CFT1YDR301W COY1P34237 679 aa1.71□□□□□ -2.14
CFT1YDR301W SQT1P35184 431 aa1.71□□□□□ -2.14
CFT1YDR301W MUP3P38734 546 aa1.71□□□□□ -2.14
CFT1YDR301W BOL3P39724 118 aa1.71□□□□□ -2.14
CFT1YDR301W DLD3P39976 496 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W GTS1P40956 396 aa1.71□□□□□ -2.14
CFT1YDR301W YJR124CP47159 448 aa1.71□□□□□ -2.14
CFT1YDR301W AMA1P50082 593 aa1.71□□□□□ -2.14
CFT1YDR301W YGR250CP53316 781 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W NMA111P53920 997 aa1.71□□□□□ -2.14
CFT1YDR301W TRS31Q03337 283 aa1.71□□□□□ -2.14
CFT1YDR301W FAR8Q05040 523 aa1.71□□□□□ -2.14
CFT1YDR301W CIA1Q05583 330 aa1.71□□□□□ -2.14
CFT1YDR301W BSC2Q05611 235 aa1.71□□□□□ -2.14
CFT1YDR301W YPR114WQ06107 315 aa1.71□□□□□ -2.14
CFT1YDR301W YCS4Q06156 1176 aa1.71□□□□□ -2.14
CFT1YDR301W SFH1Q06168 426 aa1.71□□□□□ -2.14
CFT1YDR301W BUD20Q08004 166 aaPredicted RBP1.71□□□□□ -2.14
CFT1YDR301W SLH1P53327 1967 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W SPT3P06844 337 aa1.7□□□□□ -2.14
CFT1YDR301W RAP1P11938 827 aa1.7□□□□□ -2.14
CFT1YDR301W SCL1P21243 252 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W VMA4P22203 233 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W PDE1P22434 369 aa1.7□□□□□ -2.14
CFT1YDR301W UBA1P22515 1024 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W PEX1P24004 1043 aa1.7□□□□□ -2.14
CFT1YDR301W RFA2P26754 273 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W SBA1P28707 216 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W MF(ALPHA)2P32435 120 aa1.7□□□□□ -2.14
CFT1YDR301W SPS19P32573 292 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W STE13P33894 931 aa1.7□□□□□ -2.14
CFT1YDR301W KES1P35844 434 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W IRS4P36115 615 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W PBP2P38151 413 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
CFT1YDR301W YHR045WP38775 560 aa1.7□□□□□ -2.14
CFT1YDR301W STN1P38960 494 aa1.7□□□□□ -2.14
CFT1YDR301W YER034WP40022 185 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W YTA6P40328 754 aa1.7□□□□□ -2.14
CFT1YDR301W EMW1P42842 904 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W TDA10P42938 290 aa1.7□□□□□ -2.14
CFT1YDR301W PMT3P47190 753 aa1.7□□□□□ -2.14
CFT1YDR301W YGL140CP53120 1219 aa1.7□□□□□ -2.14
CFT1YDR301W SFB2P53953 876 aa1.7□□□□□ -2.14
CFT1YDR301W SLM2P53955 656 aa1.7□□□□□ -2.14
CFT1YDR301W TVP15Q03860 143 aa1.7□□□□□ -2.14
CFT1YDR301W YLR177WQ06251 628 aa1.7□□□□□ -2.14
CFT1YDR301W RTT10Q08924 1013 aa1.7□□□□□ -2.14
CFT1YDR301W RUD3Q12234 484 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W WHI5Q12416 295 aa1.7□□□□□ -2.14
CFT1YDR301W AHA1Q12449 350 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W RGS2Q99188 309 aa1.7□□□□□ -2.14
CFT1YDR301W SSC1P0CS90 654 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W SST2P11972 698 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W CDC34P14682 295 aa1.7□□□□□ -2.14
CFT1YDR301W HSP26P15992 214 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
CFT1YDR301W TRX2P22803 104 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W PUP3P25451 205 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W PHA2P32452 334 aa1.7□□□□□ -2.14
CFT1YDR301W RPS1AP33442 255 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W YBR071WP38243 211 aa1.7□□□□□ -2.14
CFT1YDR301W HSM3P38348 480 aa1.7□□□□□ -2.14
CFT1YDR301W UBA4P38820 440 aa1.7□□□□□ -2.14
CFT1YDR301W FMO1P38866 432 aa1.7□□□□□ -2.14
CFT1YDR301W YHR182WP38870 785 aa1.7□□□□□ -2.14
CFT1YDR301W NTA1P40354 457 aa1.7□□□□□ -2.14
CFT1YDR301W UTP18P40362 594 aaPredicted RBP1.7□□□□□ -2.14
CFT1YDR301W YGL108CP53139 140 aa1.7□□□□□ -2.14
CFT1YDR301W YGR012WP53206 393 aa1.7□□□□□ -2.14
CFT1YDR301W SHY1P53266 389 aa1.7□□□□□ -2.14
CFT1YDR301W YGR127WP53275 312 aa1.7□□□□□ -2.14
CFT1YDR301W ZRG17P53735 605 aa1.7□□□□□ -2.14
CFT1YDR301W ESF2P53743 316 aaKnown RBP1.7□□□□□ -2.14
CFT1YDR301W IST1P53843 298 aaPredicted RBP1.7□□□□□ -2.14
CFT1YDR301W YPL113CQ02961 396 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms