RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene SHU2, Length 672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHU2	YDR078C	REG2	P38232	338 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	PAC2	P39937	518 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	YIL166C	P40445	542 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	PKP1	P40530	394 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	SAE2	P46946	345 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	YJL043W	P47053	257 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	RPS7B	P48164	190 aa	Known RBP	4.25	□□□□□ -1.73
SHU2	YDR078C	YGR066C	P53242	292 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	YNL058C	P53947	316 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	BUD22	Q04347	519 aa	Known RBP	4.25	□□□□□ -1.73
SHU2	YDR078C	GET3	Q12154	354 aa	Known RBP	4.25	□□□□□ -1.73
SHU2	YDR078C	RTN2	Q12443	393 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	YPT6	Q99260	215 aa		4.25	□□□□□ -1.73
SHU2	YDR078C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SHU2	YDR078C	PET111	P08468	800 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	SPO11	P23179	398 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	GSY2	P27472	705 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	UIP3	P39547	235 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	YEL057C	P39983	233 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	BUR6	P40096	142 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	MET28	P40573	187 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	CTK2	P46962	323 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	DPB11	P47027	764 aa	Predicted RBP	4.24	□□□□□ -1.73
SHU2	YDR078C	APM1	Q00776	475 aa	Predicted RBP	4.24	□□□□□ -1.73
SHU2	YDR078C	SUT2	Q12286	268 aa		4.24	□□□□□ -1.73
SHU2	YDR078C	RDL1	Q12305	139 aa	Known RBP	4.24	□□□□□ -1.73
SHU2	YDR078C	MAK32	P23060	363 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	ADH7	P25377	361 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	ORC2	P32833	620 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	SNU114	P36048	1008 aa	Known RBP	4.23	□□□□□ -1.73
SHU2	YDR078C	MNN2	P38069	597 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	FTH1	P38310	465 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	LSM5	P40089	93 aa	Known RBP	4.23	□□□□□ -1.73
SHU2	YDR078C	MET18	P40469	1032 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	YFR020W	P43600	232 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	ROK1	P45818	564 aa	Predicted RBP	4.23	□□□□□ -1.73
SHU2	YDR078C	STU2	P46675	888 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	DIA3	P52290	468 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	YPR003C	P53394	754 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	JJJ1	P53863	590 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	YMR155W	Q03795	547 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	THI3	Q07471	609 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	BUD7	Q08754	746 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	ATG9	Q12142	997 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	INP53	Q12271	1107 aa		4.23	□□□□□ -1.73
SHU2	YDR078C	MF(ALPHA)1	P01149	165 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	BI2	P03873	423 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	CUE2	P36075	443 aa	Known RBP	4.22	□□□□□ -1.73
SHU2	YDR078C	BYE1	P36106	594 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	AFG3	P39925	761 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	AXL1	P40851	1208 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	CDC1	P40986	491 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	VID30	P53076	958 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	YGR250C	P53316	781 aa	Known RBP	4.22	□□□□□ -1.73
SHU2	YDR078C	MAK10	Q02197	733 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	LUC7	Q07508	261 aa	Predicted RBP	4.22	□□□□□ -1.73
SHU2	YDR078C	FMP40	Q08968	688 aa	Predicted RBP	4.22	□□□□□ -1.73
SHU2	YDR078C	GRX6	Q12438	231 aa		4.22	□□□□□ -1.73
SHU2	YDR078C	RPC53	P25441	422 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	YKL050C	P35736	922 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	UBP11	P36026	717 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	MUM2	P38236	366 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	APD1	P38281	316 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	ERV46	P39727	415 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SHU2	YDR078C	GPD2	P41911	440 aa	Known RBP	4.21	□□□□□ -1.74
SHU2	YDR078C	SMC3	P47037	1230 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	EFM6	P53970	246 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	ARO10	Q06408	635 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	YOR389W	Q08912	624 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	RIM20	Q12033	661 aa		4.21	□□□□□ -1.74
SHU2	YDR078C	MRP2	P10663	115 aa	Predicted RBP	4.2	□□□□□ -1.74
SHU2	YDR078C	PDX1	P16451	410 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	ADY2	P25613	283 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	SSE2	P32590	693 aa	Known RBP	4.2	□□□□□ -1.74
SHU2	YDR078C	VMA8	P32610	256 aa	Known RBP	4.2	□□□□□ -1.74
SHU2	YDR078C	VID24	P38263	362 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	IMD2	P38697	523 aa	Known RBP	4.2	□□□□□ -1.74
SHU2	YDR078C	SMF1	P38925	575 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	DOT5	P40553	215 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	CIN1	P40987	1014 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	IRC8	P47046	822 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	IMD3	P50095	523 aa	Known RBP	4.2	□□□□□ -1.74
SHU2	YDR078C	ZDS2	P54786	942 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	FMP30	Q02883	468 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	VPS38	Q05919	439 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	YLR455W	Q06188	304 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	BSP1	Q06604	576 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	AVL9	Q12500	764 aa		4.2	□□□□□ -1.74
SHU2	YDR078C	EST1	P17214	699 aa	Predicted RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	MSS51	P32335	436 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	SEF1	P34228	1148 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	TCD2	P36101	447 aa	Known RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	CST26	P38226	397 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	ELO1	P39540	310 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	FAR3	P46671	204 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	APT1	P49435	187 aa	Known RBP	4.19	□□□□□ -1.74
SHU2	YDR078C	RSC1	P53236	928 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	YGR127W	P53275	312 aa		4.19	□□□□□ -1.74
SHU2	YDR078C	MDG1	P53885	366 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms