RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W AIM33Q04516 312 aa2.26□□□□□ -2.05
UBP1YDL122W STP3Q05937 343 aa2.26□□□□□ -2.05
UBP1YDL122W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
UBP1YDL122W YOR387CQ08910 206 aa2.26□□□□□ -2.05
UBP1YDL122W YDL211CQ12121 372 aa2.26□□□□□ -2.05
UBP1YDL122W COX17Q12287 69 aa2.26□□□□□ -2.05
UBP1YDL122W GCD1P09032 578 aaPredicted RBP2.25□□□□□ -2.05
UBP1YDL122W COX11P19516 300 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W NPP1P25353 742 aa2.25□□□□□ -2.05
UBP1YDL122W PRO1P32264 428 aa2.25□□□□□ -2.05
UBP1YDL122W EBP2P36049 427 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W TDA3P38758 523 aa2.25□□□□□ -2.05
UBP1YDL122W RET2P43621 546 aa2.25□□□□□ -2.05
UBP1YDL122W RPC17P47076 161 aa2.25□□□□□ -2.05
UBP1YDL122W BPL1P48445 690 aaPredicted RBP2.25□□□□□ -2.05
UBP1YDL122W ASN1P49089 572 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W VPS73P53142 486 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W SGF73P53165 657 aa2.25□□□□□ -2.05
UBP1YDL122W RET3P53600 189 aa2.25□□□□□ -2.05
UBP1YDL122W PIR3Q03180 325 aa2.25□□□□□ -2.05
UBP1YDL122W NHX1Q04121 633 aa2.25□□□□□ -2.05
UBP1YDL122W ALG6Q12001 544 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W ENV7Q12003 364 aa2.25□□□□□ -2.05
UBP1YDL122W SVS1Q12254 260 aa2.25□□□□□ -2.05
UBP1YDL122W YDR262WQ12331 272 aa2.25□□□□□ -2.05
UBP1YDL122W YPT1P01123 206 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W CLC1P17891 233 aa2.25□□□□□ -2.05
UBP1YDL122W URA4P20051 364 aa2.25□□□□□ -2.05
UBP1YDL122W YCR102CP25608 368 aa2.25□□□□□ -2.05
UBP1YDL122W CPR3P25719 182 aa2.25□□□□□ -2.05
UBP1YDL122W SIN4P32259 974 aa2.25□□□□□ -2.05
UBP1YDL122W FRE1P32791 686 aa2.25□□□□□ -2.05
UBP1YDL122W MRPL15P36523 253 aa2.25□□□□□ -2.05
UBP1YDL122W AXL2P38928 823 aa2.25□□□□□ -2.05
UBP1YDL122W DHH1P39517 506 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W NPP2P39997 493 aa2.25□□□□□ -2.05
UBP1YDL122W CCT5P40413 562 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W HOS4P40480 1083 aa2.25□□□□□ -2.05
UBP1YDL122W YJR030CP47101 745 aa2.25□□□□□ -2.05
UBP1YDL122W YJR054WP47114 497 aa2.25□□□□□ -2.05
UBP1YDL122W RSC1P53236 928 aa2.25□□□□□ -2.05
UBP1YDL122W BSC5P53755 489 aa2.25□□□□□ -2.05
UBP1YDL122W ECM9Q02202 377 aa2.25□□□□□ -2.05
UBP1YDL122W SMD2Q06217 110 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W CDD1Q06549 142 aa2.25□□□□□ -2.05
UBP1YDL122W PEX15Q08215 383 aa2.25□□□□□ -2.05
UBP1YDL122W NDD1Q08887 554 aa2.25□□□□□ -2.05
UBP1YDL122W NEW1Q08972 1196 aaKnown RBP2.25□□□□□ -2.05
UBP1YDL122W ACM1Q08981 209 aa2.25□□□□□ -2.05
UBP1YDL122W YPR027CQ12079 277 aa2.25□□□□□ -2.05
UBP1YDL122W NBP2Q12163 236 aa2.25□□□□□ -2.05
UBP1YDL122W YDR018CQ12185 396 aa2.25□□□□□ -2.05
UBP1YDL122W DAL81P21657 970 aa2.24□□□□□ -2.05
UBP1YDL122W PPH21P23594 369 aa2.24□□□□□ -2.05
UBP1YDL122W YCL049CP25577 312 aa2.24□□□□□ -2.05
UBP1YDL122W KRE6P32486 720 aa2.24□□□□□ -2.05
UBP1YDL122W NFU1P32860 256 aa2.24□□□□□ -2.05
UBP1YDL122W FTH1P38310 465 aa2.24□□□□□ -2.05
UBP1YDL122W VHC1P38329 1120 aa2.24□□□□□ -2.05
UBP1YDL122W MNT3P40549 630 aa2.24□□□□□ -2.05
UBP1YDL122W YGR045CP53229 120 aa2.24□□□□□ -2.05
UBP1YDL122W MAL12P53341 584 aa2.24□□□□□ -2.05
UBP1YDL122W TOF1P53840 1238 aa2.24□□□□□ -2.05
UBP1YDL122W ORC3P54790 616 aa2.24□□□□□ -2.05
UBP1YDL122W SDH1Q00711 640 aa2.24□□□□□ -2.05
UBP1YDL122W MDM30Q05930 598 aa2.24□□□□□ -2.05
UBP1YDL122W RSA3Q05942 220 aaKnown RBP2.24□□□□□ -2.05
UBP1YDL122W TSR2Q06672 205 aaKnown RBP2.24□□□□□ -2.05
UBP1YDL122W CSR1Q06705 408 aaKnown RBP2.24□□□□□ -2.05
UBP1YDL122W YLR049CQ12110 428 aa2.24□□□□□ -2.05
UBP1YDL122W PER33Q12144 273 aa2.24□□□□□ -2.05
UBP1YDL122W YOR342CQ12182 319 aa2.24□□□□□ -2.05
UBP1YDL122W SFI1Q12369 946 aa2.24□□□□□ -2.05
UBP1YDL122W YOL087CQ99247 1116 aa2.24□□□□□ -2.05
UBP1YDL122W MDN1Q12019 4910 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W MSS18P08593 268 aa2.23□□□□□ -2.05
UBP1YDL122W YKR104WP0CE69 306 aa2.23□□□□□ -2.05
UBP1YDL122W NAT1P12945 854 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W MCM10P32354 571 aa2.23□□□□□ -2.05
UBP1YDL122W NIP1P32497 812 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W ORC2P32833 620 aa2.23□□□□□ -2.05
UBP1YDL122W BLI1P35727 113 aa2.23□□□□□ -2.05
UBP1YDL122W YKR078WP36158 585 aaKnown RBP2.23□□□□□ -2.05
UBP1YDL122W ARA1P38115 344 aa2.23□□□□□ -2.05
UBP1YDL122W HSL7P38274 827 aa2.23□□□□□ -2.05
UBP1YDL122W TMA108P40462 946 aa2.23□□□□□ -2.05
UBP1YDL122W QRI7P43122 407 aa2.23□□□□□ -2.05
UBP1YDL122W ALY2P47029 1046 aa2.23□□□□□ -2.05
UBP1YDL122W SRB7P47822 140 aa2.23□□□□□ -2.05
UBP1YDL122W ORC5P50874 479 aa2.23□□□□□ -2.05
UBP1YDL122W ELA1P53861 379 aaPredicted RBP2.23□□□□□ -2.05
UBP1YDL122W ARP9Q05123 467 aa2.23□□□□□ -2.05
UBP1YDL122W HRD3Q05787 833 aa2.23□□□□□ -2.05
UBP1YDL122W OPY2Q06810 360 aa2.23□□□□□ -2.05
UBP1YDL122W YLR012CQ07927 99 aa2.23□□□□□ -2.05
UBP1YDL122W HER1Q12276 1246 aa2.23□□□□□ -2.05
UBP1YDL122W DFG16Q99234 619 aa2.23□□□□□ -2.05
UBP1YDL122W FOB1O13329 566 aa2.23□□□□□ -2.05
UBP1YDL122W SPS1P08458 490 aa2.23□□□□□ -2.05
UBP1YDL122W RPS4AP0CX35 261 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms