RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C CLB2P24869 491 aa2.98□□□□□ -1.93
ASM4YDL088C TFC3P34111 1160 aa2.98□□□□□ -1.93
ASM4YDL088C RPT2P40327 437 aaKnown RBP2.98□□□□□ -1.93
ASM4YDL088C PSF2P40359 213 aa2.98□□□□□ -1.93
ASM4YDL088C SWP82P43554 623 aa2.98□□□□□ -1.93
ASM4YDL088C NNF2P53253 936 aa2.98□□□□□ -1.93
ASM4YDL088C TMA16Q08687 178 aa2.98□□□□□ -1.93
ASM4YDL088C PPT2Q12036 173 aa2.98□□□□□ -1.93
ASM4YDL088C CPR3P25719 182 aa2.97□□□□□ -1.93
ASM4YDL088C MIC60P36112 540 aa2.97□□□□□ -1.93
ASM4YDL088C GEX2P36173 615 aa2.97□□□□□ -1.93
ASM4YDL088C ERG7P38604 731 aa2.97□□□□□ -1.93
ASM4YDL088C RRP3P38712 501 aaKnown RBP2.97□□□□□ -1.93
ASM4YDL088C YJR061WP40355 935 aa2.97□□□□□ -1.93
ASM4YDL088C FET5P43561 622 aa2.97□□□□□ -1.93
ASM4YDL088C YFR020WP43600 232 aa2.97□□□□□ -1.93
ASM4YDL088C YMR178WQ03219 274 aaKnown RBP2.97□□□□□ -1.93
ASM4YDL088C YBR298C-AQ8TGK4 73 aa2.97□□□□□ -1.93
ASM4YDL088C TPK1P06244 397 aa2.96□□□□□ -1.94
ASM4YDL088C CDC15P27636 974 aa2.96□□□□□ -1.94
ASM4YDL088C ESL2P36168 1195 aa2.96□□□□□ -1.94
ASM4YDL088C COG1P53079 417 aa2.96□□□□□ -1.94
ASM4YDL088C NYV1Q12255 253 aa2.96□□□□□ -1.94
ASM4YDL088C ERG27Q12452 347 aaKnown RBP2.96□□□□□ -1.94
ASM4YDL088C YEF3P16521 1044 aaKnown RBP2.95□□□□□ -1.94
ASM4YDL088C KRE9P39005 276 aa2.95□□□□□ -1.94
ASM4YDL088C YIL060WP40519 144 aa2.95□□□□□ -1.94
ASM4YDL088C RSA1Q08932 381 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-LR1P0C2J4 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-FP0CX61 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-GR2P0CX62 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-CP25383 438 aa2.95□□□□□ -1.94
ASM4YDL088C BUD14P27637 709 aa2.95□□□□□ -1.94
ASM4YDL088C SRB5P32585 307 aa2.95□□□□□ -1.94
ASM4YDL088C NPR3P38742 1146 aa2.95□□□□□ -1.94
ASM4YDL088C RGI2P40188 164 aa2.95□□□□□ -1.94
ASM4YDL088C DIM1P41819 318 aaKnown RBP2.95□□□□□ -1.94
ASM4YDL088C CSL4P53859 292 aaPredicted RBP2.95□□□□□ -1.94
ASM4YDL088C MAK10Q02197 733 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-DR2Q03483 438 aa2.95□□□□□ -1.94
ASM4YDL088C CSR1Q06705 408 aaKnown RBP2.95□□□□□ -1.94
ASM4YDL088C TY2A-BQ12260 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-OR2Q12293 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-DR1Q12392 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-OR1Q12439 438 aa2.95□□□□□ -1.94
ASM4YDL088C TY2A-DR3Q99303 438 aa2.95□□□□□ -1.94
ASM4YDL088C HXK2P04807 486 aaKnown RBP2.94□□□□□ -1.94
ASM4YDL088C NUC1P08466 329 aa2.94□□□□□ -1.94
ASM4YDL088C NCP1P16603 691 aaKnown RBP2.94□□□□□ -1.94
ASM4YDL088C SAN1P22470 610 aa2.94□□□□□ -1.94
ASM4YDL088C RAD16P31244 790 aa2.94□□□□□ -1.94
ASM4YDL088C ERG1P32476 496 aaKnown RBP2.94□□□□□ -1.94
ASM4YDL088C YHL041WP38730 149 aa2.94□□□□□ -1.94
ASM4YDL088C IST1P53843 298 aaPredicted RBP2.94□□□□□ -1.94
ASM4YDL088C NUP100Q02629 959 aa2.94□□□□□ -1.94
ASM4YDL088C TMA64Q04600 565 aaKnown RBP2.94□□□□□ -1.94
ASM4YDL088C RDR1Q08904 546 aa2.94□□□□□ -1.94
ASM4YDL088C RRP6Q12149 733 aaKnown RBP2.94□□□□□ -1.94
ASM4YDL088C MCM4P30665 933 aaKnown RBP2.93□□□□□ -1.94
ASM4YDL088C MDM31P38880 579 aa2.93□□□□□ -1.94
ASM4YDL088C YHR218WP38899 603 aa2.93□□□□□ -1.94
ASM4YDL088C PFK26P40433 827 aaKnown RBP2.93□□□□□ -1.94
ASM4YDL088C RPN11P43588 306 aaKnown RBP2.93□□□□□ -1.94
ASM4YDL088C LCB1P25045 558 aaKnown RBP2.92□□□□□ -1.94
ASM4YDL088C GAC1P28006 793 aa2.92□□□□□ -1.94
ASM4YDL088C TOM20P35180 183 aa2.92□□□□□ -1.94
ASM4YDL088C MIA40P36046 403 aa2.92□□□□□ -1.94
ASM4YDL088C PHD1P36093 366 aa2.92□□□□□ -1.94
ASM4YDL088C RTS1P38903 757 aa2.92□□□□□ -1.94
ASM4YDL088C PHO90P39535 881 aa2.92□□□□□ -1.94
ASM4YDL088C IST3P40565 148 aaPredicted RBP2.92□□□□□ -1.94
ASM4YDL088C TDA7P53882 636 aaPredicted RBP2.92□□□□□ -1.94
ASM4YDL088C SMA2Q04658 369 aa2.92□□□□□ -1.94
ASM4YDL088C APL4Q12028 832 aa2.92□□□□□ -1.94
ASM4YDL088C PCD1Q12524 340 aa2.92□□□□□ -1.94
ASM4YDL088C SMC3P47037 1230 aa2.91□□□□□ -1.94
ASM4YDL088C PAP2P53632 584 aaKnown RBP2.91□□□□□ -1.94
ASM4YDL088C MRPL13Q02204 264 aa2.91□□□□□ -1.94
ASM4YDL088C ATP4P05626 244 aa2.91□□□□□ -1.94
ASM4YDL088C YCL049CP25577 312 aa2.91□□□□□ -1.94
ASM4YDL088C PKP1P40530 394 aa2.91□□□□□ -1.94
ASM4YDL088C CTF18P49956 741 aa2.91□□□□□ -1.94
ASM4YDL088C YGL082WP53155 381 aa2.91□□□□□ -1.94
ASM4YDL088C PKP2P53170 491 aa2.91□□□□□ -1.94
ASM4YDL088C SOL4P53315 255 aa2.91□□□□□ -1.94
ASM4YDL088C ATG26Q06321 1198 aa2.91□□□□□ -1.94
ASM4YDL088C FMP45Q07651 309 aa2.91□□□□□ -1.94
ASM4YDL088C YEH2Q07950 538 aa2.91□□□□□ -1.94
ASM4YDL088C CBS2P14905 389 aa2.9□□□□□ -1.95
ASM4YDL088C PFK2P16862 959 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
ASM4YDL088C SPE2P21182 396 aa2.9□□□□□ -1.95
ASM4YDL088C DPB11P47027 764 aaPredicted RBP2.9□□□□□ -1.95
ASM4YDL088C IKS1P47042 667 aa2.9□□□□□ -1.95
ASM4YDL088C MSS11Q03825 758 aa2.9□□□□□ -1.95
ASM4YDL088C REV1P12689 985 aa2.89□□□□□ -1.95
ASM4YDL088C YKL050CP35736 922 aa2.89□□□□□ -1.95
ASM4YDL088C YNK1P36010 153 aaKnown RBP2.89□□□□□ -1.95
ASM4YDL088C AXL1P40851 1208 aa2.89□□□□□ -1.95
ASM4YDL088C GUF1P46943 645 aa2.89□□□□□ -1.95
ASM4YDL088C REG1Q00816 1014 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms