RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C ATG23Q06671 453 aa4.02□□□□□ -1.77
PRP11YDL043C SWT1Q12104 458 aa4.02□□□□□ -1.77
PRP11YDL043C RRG1Q12167 365 aaPredicted RBP4.02□□□□□ -1.77
PRP11YDL043C SPA2P23201 1466 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C CDC37P06101 506 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C YML003WP0CF16 290 aa4.01□□□□□ -1.77
PRP11YDL043C SUI2P20459 304 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C YCK1P23291 538 aa4.01□□□□□ -1.77
PRP11YDL043C HSP104P31539 908 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C RSM22P36056 628 aa4.01□□□□□ -1.77
PRP11YDL043C ALY1P36117 915 aa4.01□□□□□ -1.77
PRP11YDL043C PPS1P38148 807 aa4.01□□□□□ -1.77
PRP11YDL043C YBL029WP38201 376 aa4.01□□□□□ -1.77
PRP11YDL043C PIH1P38768 344 aa4.01□□□□□ -1.77
PRP11YDL043C ARO9P38840 513 aaPredicted RBP4.01□□□□□ -1.77
PRP11YDL043C LNP1P38878 278 aa4.01□□□□□ -1.77
PRP11YDL043C UTP9P38882 575 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C FLC2P39719 783 aa4.01□□□□□ -1.77
PRP11YDL043C TPA1P40032 644 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C YJL070CP40361 888 aa4.01□□□□□ -1.77
PRP11YDL043C GCN20P43535 752 aaKnown RBP4.01□□□□□ -1.77
PRP11YDL043C YIP4P53093 235 aa4.01□□□□□ -1.77
PRP11YDL043C NMA2P53204 395 aa4.01□□□□□ -1.77
PRP11YDL043C IMO32P53219 342 aa4.01□□□□□ -1.77
PRP11YDL043C BUD17P53727 317 aa4.01□□□□□ -1.77
PRP11YDL043C VPS75P53853 264 aa4.01□□□□□ -1.77
PRP11YDL043C SSL2Q00578 843 aa4.01□□□□□ -1.77
PRP11YDL043C MUB1Q03162 620 aa4.01□□□□□ -1.77
PRP11YDL043C RAD30Q04049 632 aa4.01□□□□□ -1.77
PRP11YDL043C YLR040CQ07988 224 aa4.01□□□□□ -1.77
PRP11YDL043C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
PRP11YDL043C YPL216WQ08964 1102 aa4.01□□□□□ -1.77
PRP11YDL043C NMD4Q12129 218 aa4.01□□□□□ -1.77
PRP11YDL043C STH1P32597 1359 aa4.01□□□□□ -1.77
PRP11YDL043C ARG3P05150 338 aa4□□□□□ -1.77
PRP11YDL043C REC107P21651 314 aa4□□□□□ -1.77
PRP11YDL043C ROX1P25042 368 aa4□□□□□ -1.77
PRP11YDL043C HCM1P25364 564 aa4□□□□□ -1.77
PRP11YDL043C LRE1P25579 583 aaKnown RBP4□□□□□ -1.77
PRP11YDL043C MEI5P32489 222 aa4□□□□□ -1.77
PRP11YDL043C PXA2P34230 853 aa4□□□□□ -1.77
PRP11YDL043C YSW1P38280 609 aa4□□□□□ -1.77
PRP11YDL043C KSP1P38691 1029 aaKnown RBP4□□□□□ -1.77
PRP11YDL043C SLZ1P40167 298 aa4□□□□□ -1.77
PRP11YDL043C PFK26P40433 827 aaKnown RBP4□□□□□ -1.77
PRP11YDL043C CIR1P42940 261 aa4□□□□□ -1.77
PRP11YDL043C MRX6P48564 524 aa4□□□□□ -1.77
PRP11YDL043C SPC98P53540 846 aa4□□□□□ -1.77
PRP11YDL043C YNR061CP53747 219 aa4□□□□□ -1.77
PRP11YDL043C INN1P53901 409 aa4□□□□□ -1.77
PRP11YDL043C RPT6Q01939 405 aaKnown RBP4□□□□□ -1.77
PRP11YDL043C RRP17Q04031 235 aaPredicted RBP4□□□□□ -1.77
PRP11YDL043C MDM36Q06820 579 aa4□□□□□ -1.77
PRP11YDL043C BRX1Q08235 291 aaKnown RBP4□□□□□ -1.77
PRP11YDL043C CTI6Q08923 506 aa4□□□□□ -1.77
PRP11YDL043C PGC1Q08959 321 aa4□□□□□ -1.77
PRP11YDL043C TGS1Q12052 315 aa4□□□□□ -1.77
PRP11YDL043C PRS5Q12265 496 aaKnown RBP4□□□□□ -1.77
PRP11YDL043C TAF3Q12297 353 aa4□□□□□ -1.77
PRP11YDL043C NTO1Q12311 748 aa4□□□□□ -1.77
PRP11YDL043C YER175W-AQ8TGU4 54 aa4□□□□□ -1.77
PRP11YDL043C TEF1P02994 458 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C VMA2P16140 517 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C STE4P18851 423 aa3.99□□□□□ -1.77
PRP11YDL043C KGD2P19262 463 aaPredicted RBP3.99□□□□□ -1.77
PRP11YDL043C PMA2P19657 947 aa3.99□□□□□ -1.77
PRP11YDL043C VPS3P23643 1011 aa3.99□□□□□ -1.77
PRP11YDL043C CDC10P25342 322 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C SRB5P32585 307 aa3.99□□□□□ -1.77
PRP11YDL043C YEL043WP32618 956 aa3.99□□□□□ -1.77
PRP11YDL043C LOT5P34234 306 aa3.99□□□□□ -1.77
PRP11YDL043C KTR3P38130 404 aaPredicted RBP3.99□□□□□ -1.77
PRP11YDL043C YPT10P38146 199 aa3.99□□□□□ -1.77
PRP11YDL043C OLA1P38219 394 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C SUL1P38359 859 aa3.99□□□□□ -1.77
PRP11YDL043C ARG2P40360 574 aa3.99□□□□□ -1.77
PRP11YDL043C INA22P40576 216 aa3.99□□□□□ -1.77
PRP11YDL043C GPD2P41911 440 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C YGR079WP53249 370 aa3.99□□□□□ -1.77
PRP11YDL043C GIM3P53900 129 aa3.99□□□□□ -1.77
PRP11YDL043C ARP5P53946 755 aa3.99□□□□□ -1.77
PRP11YDL043C YPL071CQ02864 156 aa3.99□□□□□ -1.77
PRP11YDL043C NGL2Q03264 515 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C ARP9Q05123 467 aa3.99□□□□□ -1.77
PRP11YDL043C MRI1Q06489 411 aaKnown RBP3.99□□□□□ -1.77
PRP11YDL043C LOT6Q07923 191 aa3.99□□□□□ -1.77
PRP11YDL043C RKM1Q08961 583 aaPredicted RBP3.99□□□□□ -1.77
PRP11YDL043C RCN2Q12044 265 aa3.99□□□□□ -1.77
PRP11YDL043C SFI1Q12369 946 aa3.99□□□□□ -1.77
PRP11YDL043C SMC6Q12749 1114 aa3.99□□□□□ -1.77
PRP11YDL043C LAM4P38800 1345 aa3.98□□□□□ -1.77
PRP11YDL043C CET1O13297 549 aaPredicted RBP3.98□□□□□ -1.77
PRP11YDL043C AAC1P04710 309 aa3.98□□□□□ -1.77
PRP11YDL043C MET17P06106 444 aa3.98□□□□□ -1.77
PRP11YDL043C YPK1P12688 680 aaKnown RBP3.98□□□□□ -1.77
PRP11YDL043C CTS1P29029 562 aa3.98□□□□□ -1.77
PRP11YDL043C VMA8P32610 256 aaKnown RBP3.98□□□□□ -1.77
PRP11YDL043C YKL023WP36103 277 aaKnown RBP3.98□□□□□ -1.77
PRP11YDL043C ECM4P36156 370 aa3.98□□□□□ -1.77
PRP11YDL043C RTS1P38903 757 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms