RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 A0A0C4DFX4 3053 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 USP17L12C9JPN9 530 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 USP17L21D6R901 530 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 SEPT4O43236 478 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 FLOT1O75955 427 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 CYP2D6P10635 497 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 CDK8P49336 464 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 EVX2Q03828 476 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 LRRC26Q2I0M4 334 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 ARRDC4Q8NCT1 418 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
TMEM40-208ENST00000485124 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
TMEM40-208ENST00000485124 DIS3Q9Y2L1 958 aaKnown RBP11.85□□□□□ -0.51
TMEM40-208ENST00000485124 LTBP2Q14767 1821 aa11.85□□□□□ -0.51
TMEM40-208ENST00000485124 PRKAB2O43741 272 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 SYN1P17600 705 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 CNGA1P29973 690 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 CYP2C19P33261 490 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 C1orf53Q5VUE5 145 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 SYNPO2Q9UMS6 1093 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 SLC4A4Q9Y6R1 1079 aa11.84□□□□□ -0.51
TMEM40-208ENST00000485124 SMCHD1A6NHR9 2005 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
TMEM40-208ENST00000485124 FCER1AP12319 257 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
TMEM40-208ENST00000485124 SNX17Q15036 470 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 TRPV1Q8NER1 839 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 ATG4CQ96DT6 458 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 STRBPQ96SI9 672 aaKnown RBP11.83□□□□□ -0.52
TMEM40-208ENST00000485124 SENP6Q9GZR1 1112 aaPredicted RBP11.83□□□□□ -0.52
TMEM40-208ENST00000485124 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
TMEM40-208ENST00000485124 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 MYH4Q9Y623 1939 aa11.83□□□□□ -0.52
TMEM40-208ENST00000485124 KBTBD13C9JR72 458 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 COBLO75128 1261 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 GNAT2P19087 354 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 NUCB1Q02818 461 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
TMEM40-208ENST00000485124 TMEM132BQ14DG7 1078 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
TMEM40-208ENST00000485124 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 SPICE1Q8N0Z3 855 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 MSL3Q8N5Y2 521 aaKnown RBP11.82□□□□□ -0.52
TMEM40-208ENST00000485124 APPBP2Q92624 585 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 ZNF287Q9HBT7 754 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 NYAP2Q9P242 653 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 ZNF214Q9UL59 606 aaPredicted RBP11.82□□□□□ -0.52
TMEM40-208ENST00000485124 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 CUL9Q8IWT3 2517 aa11.82□□□□□ -0.52
TMEM40-208ENST00000485124 VWA5AO00534 786 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 STAT3P40763 770 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 PLS1Q14651 629 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 FAM109BQ6ICB4 259 aaPredicted RBP11.81□□□□□ -0.52
TMEM40-208ENST00000485124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
TMEM40-208ENST00000485124 CLEC10AQ8IUN9 316 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
TMEM40-208ENST00000485124 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
TMEM40-208ENST00000485124 PRKAG2Q9UGJ0 569 aa11.81□□□□□ -0.52
TMEM40-208ENST00000485124 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 GSG1L2A8MUP6 293 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 SEC24BO95487 1268 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 RTP1P59025 263 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 KCTD2Q14681 263 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 ZNF792Q3KQV3 632 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 SLC39A5Q6ZMH5 540 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 DEFB123Q8N688 67 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 MMP19Q99542 508 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 TINF2Q9BSI4 451 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 STXBP5LQ9Y2K9 1186 aa11.8□□□□□ -0.52
TMEM40-208ENST00000485124 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
TMEM40-208ENST00000485124 CHGBP05060 677 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 RASA1P20936 1047 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 LRRC41Q15345 812 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 GJC2Q5T442 439 aaPredicted RBP11.79□□□□□ -0.52
TMEM40-208ENST00000485124 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
TMEM40-208ENST00000485124 MKL1Q969V6 931 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 SLF1Q9BQI6 1058 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 MKNK2Q9HBH9 465 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 FBXO28Q9NVF7 368 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
TMEM40-208ENST00000485124 TTC41PQ6P2S7 1318 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms