RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 STX17P56962 302 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 PTPAQ15257 358 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 EEF2KMTQ96G04 330 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 FAM13BQ9NYF5 915 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 PYCARDQ9ULZ3 195 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.444e-7■■■■■ 41
NEDD9-201ENST00000379433 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
NEDD9-201ENST00000379433 KLRF2D3W0D1 207 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 SCG2P13521 617 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 RASA1P20936 1047 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 CMA1P23946 247 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
NEDD9-201ENST00000379433 PTGDRQ13258 359 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 RNF26Q9BY78 433 aaPredicted RBP12.3□□□□□ -0.44
NEDD9-201ENST00000379433 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 RAD17O75943 681 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 ATP1A3P13637 1013 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 SNAP25P60880 206 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
NEDD9-201ENST00000379433 INF2Q27J81 1249 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 POTEAQ6S8J7 498 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 BLZF1Q9H2G9 400 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEDD9-201ENST00000379433 PCDHA5Q9Y5H7 936 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 LRP5O75197 1615 aa12.3□□□□□ -0.44
NEDD9-201ENST00000379433 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 KIF5BP33176 963 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 AKR1B1P15121 316 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 NPR1P16066 1061 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 PDE6BP35913 854 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 JAKMIP3Q5VZ66 844 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 ATL3Q6DD88 541 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 ZNF280DQ6N043 979 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 CACNA1SQ13698 1873 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 CTAGE5O15320 804 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 TNNT1P13805 278 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 NAPAP54920 295 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 RHBDL3P58872 404 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 SP8Q8IXZ3 490 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 TSC1Q92574 1164 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 MTA3Q9BTC8 594 aa12.29□□□□□ -0.44
NEDD9-201ENST00000379433 TRMT1Q9NXH9 659 aaKnown RBP12.29□□□□□ -0.44
NEDD9-201ENST00000379433 CNTNAP5Q8WYK1 1306 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 CCDC194A0A1B0GVG4 234 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 PP2D1A8MPX8 630 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 NRDCO43847 1150 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 GDF11O95390 407 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 COA7Q96BR5 231 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 RBM28Q9NW13 759 aaKnown RBP12.28□□□□□ -0.44
NEDD9-201ENST00000379433 IFNKQ9P0W0 207 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 CYTH3O43739 400 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 ORC4O43929 436 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 SERPINC1P01008 464 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 ZNF75DP51815 510 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
NEDD9-201ENST00000379433 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
NEDD9-201ENST00000379433 MASTLQ96GX5 879 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 CRAMP1Q96RY5 1269 aa12.28□□□□□ -0.44
NEDD9-201ENST00000379433 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
NEDD9-201ENST00000379433 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
NEDD9-201ENST00000379433 A0A1W2PQ27 194 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 A0A1W2PQ64 194 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 A0A1W2PQD8 194 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 PRPF3O43395 683 aaKnown RBP12.27□□□□□ -0.44
NEDD9-201ENST00000379433 CALM1P0DP23 149 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 CALM2P0DP24 149 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 CALM3P0DP25 149 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 TAL1P17542 331 aaPredicted RBP12.27□□□□□ -0.44
NEDD9-201ENST00000379433 FUT2Q10981 343 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 METTL16Q86W50 562 aaKnown RBP12.27□□□□□ -0.44
NEDD9-201ENST00000379433 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.44
NEDD9-201ENST00000379433 PIGSQ96S52 555 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 FOXP1Q9H334 677 aaPredicted RBP12.27□□□□□ -0.44
NEDD9-201ENST00000379433 TDRD3Q9H7E2 651 aaKnown RBP12.27□□□□□ -0.44
NEDD9-201ENST00000379433 CEP83Q9Y592 693 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 FAM205AQ6ZU69 1335 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 IRS2Q9Y4H2 1338 aa12.27□□□□□ -0.44
NEDD9-201ENST00000379433 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
NEDD9-201ENST00000379433 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
NEDD9-201ENST00000379433 GOLGA6L6A8MZA4 724 aa12.27□□□□□ -0.45
NEDD9-201ENST00000379433 PPIP5K2O43314 1243 aa12.27□□□□□ -0.45
NEDD9-201ENST00000379433 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
NEDD9-201ENST00000379433 IL1R1P14778 569 aa12.27□□□□□ -0.45
NEDD9-201ENST00000379433 KCNF1Q9H3M0 494 aa12.27□□□□□ -0.45
NEDD9-201ENST00000379433 PARP1P09874 1014 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms