RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CCT6AP40227 531 aaKnown RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 ADKP55263 362 aaKnown RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 RHBDL3P58872 404 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 NAA30Q147X3 362 aaPredicted RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 PPP2R5BQ15173 497 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 NPY5RQ15761 445 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 SLC35G1Q2M3R5 365 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 SLC27A3Q5K4L6 730 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 GPIHBP1Q8IV16 184 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 NLGN1Q8N2Q7 840 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 GJA10Q969M2 543 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 CCDC34Q96HJ3 373 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 PDGFDQ9GZP0 370 aaPredicted RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 TMEM60Q9H2L4 133 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 TMEM260Q9NX78 707 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 SMCO2A6NFE2 343 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 SRGNP10124 158 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 UBA7P41226 1012 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 STAT6P42226 847 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 TNNI2P48788 182 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 EN1Q05925 392 aaPredicted RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 RRAGBQ5VZM2 374 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 DGKHQ86XP1 1220 aa6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 MKRN1Q9UHC7 482 aaKnown RBP6.87□□□□□ -1.31
TNFSF4-201ENST00000281834 GPR75-ASB3A0A0A6YYF3 556 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 ACTN4O43707 911 aaKnown RBP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 PCP11498 1178 aaKnown RBP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 PLCG2P16885 1265 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TAL1P17542 331 aaPredicted RBP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 CUL4BQ13620 913 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 SLF2Q8IX21 1173 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 PAGE5Q96GU1 130 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TIGD1Q96MW7 591 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 CTNND2Q9UQB3 1225 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 ATP6V0A2Q9Y487 856 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 CACNA1SQ13698 1873 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 NRDCO43847 1150 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 GDF11O95390 407 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 CALML3P27482 149 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TXLNAP40222 546 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TXKP42681 527 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 PTPN14Q15678 1187 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 UBE2SQ16763 222 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 AOC3Q16853 763 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 ARMCX5Q6P1M9 558 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 SARM1Q6SZW1 724 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 DTHD1Q6ZMT9 781 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TBC1D22AQ8WUA7 517 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 RRP36Q96EU6 259 aaKnown RBP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 MTA3Q9BTC8 594 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TUBE1Q9UJT0 475 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 PCDHA4Q9UN74 947 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 ONECUT3O60422 494 aaPredicted RBP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 SSBP05455 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 FGRP09769 529 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 IL1R1P14778 569 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 CD44P16070 742 aaKnown RBP6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TECP42680 631 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 IL17AQ16552 155 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 SPICE1Q8N0Z3 855 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 IQUBQ8NA54 791 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 TEKT1Q969V4 418 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 SERPINB13Q9UIV8 391 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 GDAQ9Y2T3 454 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 IRS2Q9Y4H2 1338 aa6.86□□□□□ -1.31
TNFSF4-201ENST00000281834 WNK3Q9BYP7 1800 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CLRN2A0PK11 232 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 H0YIN7 160 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 C21orf2O43822 256 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 GNAQP50148 359 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 RCAN1P53805 252 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 PPP4CP60510 307 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 GRM4Q14833 912 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 SP8Q8IXZ3 490 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CRAMP1Q96RY5 1269 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 VPS16Q9H269 839 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 TNRC6CQ9HCJ0 1690 aaKnown RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 PCNTO95613 3336 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 C4AP0C0L4 1744 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 SLFN14P0C7P3 912 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 NPR1P16066 1061 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 ATP2C1P98194 919 aaPredicted RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 ZYXQ15942 572 aaKnown RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CCDC178Q5BJE1 867 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CDC42EP5Q6NZY7 148 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 C16orf86Q6ZW13 317 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CCDC148Q8NFR7 591 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 TBCKQ8TEA7 893 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 ZBTB9Q96C00 473 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 NUP88Q99567 741 aaPredicted RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 DESI2Q9BSY9 194 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 COA1Q9GZY4 146 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 HSD3B7Q9H2F3 369 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 TDRD3Q9H7E2 651 aaKnown RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 PCDHA6Q9UN73 950 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms