RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Nwd1A6H603 1563 aa17.27■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Krt24A1L317 512 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Nme8Q715T0 586 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Camsap3Q80VC9 1252 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Stac3Q8BZ71 360 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Traf3ip3Q8C0G2 513 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Adcy3Q8VHH7 1145 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Hic2Q9JLZ6 619 aaKnown RBP17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Hs6st3Q9QYK4 470 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Abca14E9Q8F8 1683 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Gm44503E9PYU5 387 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rnf216P58283 853 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Dynll2Q9D0M5 89 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Pnpla7A2AJ88 1352 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Capn2O08529 700 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 AsnsQ61024 561 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Krit1Q6S5J6 736 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ccdc14Q8K2J4 934 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Kcnq5Q9JK45 933 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Celf1P28659 486 aaKnown RBP17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Nkx2-3P97334 362 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Islr2Q5RKR3 745 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Maip1Q8BHE8 291 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Znf526Q8BI66 675 aa17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Yars2Q8BYL4 472 aaKnown RBP17.26■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Nbr1P97432 988 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ublcp1Q8BGR9 318 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Trim59Q922Y2 403 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Trmt112Q9DCG9 125 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 ChkbO55229 394 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rbm12b2Q66JV4 834 aaKnown RBP17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rasgrp4Q8BTM9 673 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Exoc3l2D3YUP5 789 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Cetn3O35648 167 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tmem179Q8BHH9 233 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Mfap3Q922T2 349 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Lrp2bpQ9D4C6 346 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ankrd35E9Q9D8 996 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Zfp213E9QAW0 468 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 MpndQ3TV65 487 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ttll12Q3UDE2 639 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Hook2Q7TMK6 716 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Sept9Q80UG5 583 aa17.25■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Specc1Q5SXY1 1067 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Hsf2bpQ9D4G2 338 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tcof1O08784 1320 aaKnown RBP17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 A0A1W2P6Q8 802 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Gm9048A0A1W2P7H4 802 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 A0A1W2P7Z8 802 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Gm9046A0A1W2P855 802 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Zfp597E9Q6S0 419 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Pcdhb14Q6PB90 796 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tbc1d23Q8K0F1 684 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tagap1P0CAX8 505 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tdo2P48776 406 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 MaeaQ4VC33 396 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tbc1d9bQ5SVR0 1263 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ctnna2Q61301 953 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Fgfr1opQ66JX5 399 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tsga10Q6NY15 697 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Depdc1bQ8BH88 529 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rassf2Q8BMS9 326 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Stx17Q9D0I4 301 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Klhl40Q9D783 621 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 4930407I10RikD3Z5T8 1512 aa17.24■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Krt18P05784 423 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Arl8aQ8VEH3 186 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Chmp6P0C0A3 200 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rad23aP54726 363 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Stmn4P63042 189 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ccz1Q8C1Y8 480 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 CerkQ8K4Q7 531 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rab3il1Q8VDV3 383 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Capn12Q9ER56 720 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Mtmr2Q9Z2D1 643 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rims2Q9EQZ7 1530 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Phldb3E9QAF4 648 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Nr1i2O54915 431 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 PdclQ9DBX2 301 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Myl7Q9QVP4 175 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 ChmQ9QXG2 665 aa17.23■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 MeiocA2AG06 965 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Rgs9O54828 675 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 RragaQ80X95 313 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Hgh1Q8C3I8 393 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Q8C6G1 249 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Prpf3Q922U1 683 aaKnown RBP17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Cyp3a25O09158 503 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Ccdc157Q5SPX1 718 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Kif2bQ8C0N1 668 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Tspyl4Q8VD63 406 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Samd15F6XZJ7 620 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 DSCC1Q14AI0 399 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Nlrx1Q3TL44 975 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 LrmpQ60664 539 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Krt40Q6IFX3 439 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Sdccag8Q80UF4 717 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Klhl20Q8VCK5 604 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Copb1Q9JIF7 953 aa17.22■□□□□ 0.35
Ccdc88b-201ENSMUST00000113440 Plcb1Q9Z1B3 1216 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms