RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C TFA2P36145 328 aa7.26□□□□□ -1.25
UME1YPL139C YHL041WP38730 149 aa7.26□□□□□ -1.25
UME1YPL139C CAJ1P39101 391 aa7.26□□□□□ -1.25
UME1YPL139C SIP4P46954 829 aa7.26□□□□□ -1.25
UME1YPL139C CTK3P46963 296 aaPredicted RBP7.26□□□□□ -1.25
UME1YPL139C IML2P47031 731 aa7.26□□□□□ -1.25
UME1YPL139C YJR115WP47152 169 aa7.26□□□□□ -1.25
UME1YPL139C YAT1P80235 687 aa7.26□□□□□ -1.25
UME1YPL139C CDC14Q00684 551 aa7.26□□□□□ -1.25
UME1YPL139C TRM82Q03774 444 aa7.26□□□□□ -1.25
UME1YPL139C LDB18Q07887 179 aa7.26□□□□□ -1.25
UME1YPL139C RTT10Q08924 1013 aa7.26□□□□□ -1.25
UME1YPL139C SRO7Q12038 1033 aa7.26□□□□□ -1.25
UME1YPL139C RTK1Q12100 620 aaPredicted RBP7.26□□□□□ -1.25
UME1YPL139C RKM5Q12367 367 aa7.26□□□□□ -1.25
UME1YPL139C COX3P00420 269 aa7.25□□□□□ -1.25
UME1YPL139C SPS1P08458 490 aa7.25□□□□□ -1.25
UME1YPL139C TUB1P09733 447 aaKnown RBP7.25□□□□□ -1.25
UME1YPL139C PRP9P19736 530 aaKnown RBP7.25□□□□□ -1.25
UME1YPL139C SLD2P34252 453 aa7.25□□□□□ -1.25
UME1YPL139C RPC17P47076 161 aa7.25□□□□□ -1.25
UME1YPL139C HLJ1P48353 224 aa7.25□□□□□ -1.25
UME1YPL139C PCL10P53124 433 aa7.25□□□□□ -1.25
UME1YPL139C PPN1Q04119 674 aa7.25□□□□□ -1.25
UME1YPL139C SMF3Q12078 473 aaPredicted RBP7.25□□□□□ -1.25
UME1YPL139C LDB17Q12342 491 aa7.25□□□□□ -1.25
UME1YPL139C ZRT2Q12436 422 aa7.25□□□□□ -1.25
UME1YPL139C TEF1P02994 458 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C ERG20P08524 352 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C RPL1AP0CX43 217 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C RPL1BP0CX44 217 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C CBF1P17106 351 aa7.24□□□□□ -1.25
UME1YPL139C RDS2P19541 446 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C MGT1P26188 188 aa7.24□□□□□ -1.25
UME1YPL139C YKL151CP36059 337 aa7.24□□□□□ -1.25
UME1YPL139C VHC1P38329 1120 aa7.24□□□□□ -1.25
UME1YPL139C LRP1P38801 184 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C DUG1P43616 481 aaKnown RBP7.24□□□□□ -1.25
UME1YPL139C SWC4P53201 476 aa7.24□□□□□ -1.25
UME1YPL139C YNL143CP53908 130 aa7.24□□□□□ -1.25
UME1YPL139C MET14Q02196 202 aa7.24□□□□□ -1.25
UME1YPL139C EAF1Q06337 982 aa7.24□□□□□ -1.25
UME1YPL139C MCP2Q06567 569 aa7.24□□□□□ -1.25
UME1YPL139C IMA3P0CW40 589 aa7.23□□□□□ -1.25
UME1YPL139C IMA4P0CW41 589 aa7.23□□□□□ -1.25
UME1YPL139C AMD1P15274 810 aaKnown RBP7.23□□□□□ -1.25
UME1YPL139C UBA1P22515 1024 aaKnown RBP7.23□□□□□ -1.25
UME1YPL139C YSP3P25036 478 aa7.23□□□□□ -1.25
UME1YPL139C RFA2P26754 273 aaKnown RBP7.23□□□□□ -1.25
UME1YPL139C TPS2P31688 896 aaKnown RBP7.23□□□□□ -1.25
UME1YPL139C GCG1P32656 232 aaKnown RBP7.23□□□□□ -1.25
UME1YPL139C YBR259WP38338 688 aa7.23□□□□□ -1.25
UME1YPL139C SEO1P39709 593 aa7.23□□□□□ -1.25
UME1YPL139C SCC4P40090 624 aa7.23□□□□□ -1.25
UME1YPL139C YNL320WP42840 284 aa7.23□□□□□ -1.25
UME1YPL139C YNR021WP53723 404 aaKnown RBP7.23□□□□□ -1.25
UME1YPL139C TRS31Q03337 283 aa7.23□□□□□ -1.25
UME1YPL139C IMA2Q08295 589 aa7.23□□□□□ -1.25
UME1YPL139C STB3Q12427 513 aa7.23□□□□□ -1.25
UME1YPL139C FRT1Q99332 602 aa7.23□□□□□ -1.25
UME1YPL139C YML002WP0CF17 737 aa7.22□□□□□ -1.25
UME1YPL139C SPT15P13393 240 aaKnown RBP7.22□□□□□ -1.25
UME1YPL139C EMC1P25574 760 aa7.22□□□□□ -1.25
UME1YPL139C GDA1P32621 518 aa7.22□□□□□ -1.25
UME1YPL139C NRP1P32770 719 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
UME1YPL139C IML3P38265 245 aa7.22□□□□□ -1.25
UME1YPL139C RRP3P38712 501 aaKnown RBP7.22□□□□□ -1.25
UME1YPL139C SMF2P38778 549 aa7.22□□□□□ -1.25
UME1YPL139C ERV46P39727 415 aa7.22□□□□□ -1.25
UME1YPL139C ARP4P80428 489 aa7.22□□□□□ -1.25
UME1YPL139C YML096WQ04489 525 aa7.22□□□□□ -1.25
UME1YPL139C ESC2Q06340 456 aa7.22□□□□□ -1.25
UME1YPL139C TRM8Q12009 286 aa7.22□□□□□ -1.25
UME1YPL139C QCR6P00127 147 aa7.21□□□□□ -1.25
UME1YPL139C INH1P01097 85 aa7.21□□□□□ -1.25
UME1YPL139C HSP26P15992 214 aaKnown RBP RIP-Chip data7.21□□□□□ -1.25not detected
UME1YPL139C ERG6P25087 383 aaKnown RBP7.21□□□□□ -1.25
UME1YPL139C IMP3P32899 183 aaPredicted RBP7.21□□□□□ -1.25
UME1YPL139C KES1P35844 434 aaKnown RBP7.21□□□□□ -1.25
UME1YPL139C LDB7P38210 180 aa7.21□□□□□ -1.25
UME1YPL139C PCL5P38794 229 aa7.21□□□□□ -1.25
UME1YPL139C DPH1P40487 425 aaKnown RBP7.21□□□□□ -1.25
UME1YPL139C DSN1P40568 576 aa7.21□□□□□ -1.25
UME1YPL139C TY4A-JP47023 414 aa7.21□□□□□ -1.25
UME1YPL139C NAM8Q00539 523 aaKnown RBP7.21□□□□□ -1.25
UME1YPL139C RSC4Q02206 625 aa7.21□□□□□ -1.25
UME1YPL139C UTP6Q02354 440 aaKnown RBP7.21□□□□□ -1.25
UME1YPL139C RLI1Q03195 608 aaKnown RBP7.21□□□□□ -1.25
UME1YPL139C RMP1Q12530 201 aa7.21□□□□□ -1.25
UME1YPL139C YPR089WO13585 888 aa7.2□□□□□ -1.26
UME1YPL139C GCR1P07261 785 aa7.2□□□□□ -1.26
UME1YPL139C EPT1P22140 391 aa7.2□□□□□ -1.26
UME1YPL139C SMI1P32566 505 aa7.2□□□□□ -1.26
UME1YPL139C POP4P38336 279 aa7.2□□□□□ -1.26
UME1YPL139C SRP72P38688 640 aaKnown RBP7.2□□□□□ -1.26
UME1YPL139C RPH1P39956 796 aa7.2□□□□□ -1.26
UME1YPL139C RGI2P40188 164 aa7.2□□□□□ -1.26
UME1YPL139C NRM1P53718 249 aa7.2□□□□□ -1.26
UME1YPL139C ECM9Q02202 377 aa7.2□□□□□ -1.26
UME1YPL139C VTI1Q04338 217 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 121.4 ms