RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C CET1O13297 549 aaPredicted RBP2.7□□□□□ -1.98
DNL4YOR005C RPP2AP05319 106 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C MCX1P38323 520 aaPredicted RBP2.7□□□□□ -1.98
DNL4YOR005C RRF1P38771 230 aa2.7□□□□□ -1.98
DNL4YOR005C POP2P39008 433 aa2.7□□□□□ -1.98
DNL4YOR005C SLZ1P40167 298 aa2.7□□□□□ -1.98
DNL4YOR005C SEC28P40509 296 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C DSN1P40568 576 aa2.7□□□□□ -1.98
DNL4YOR005C GLO1P50107 326 aa2.7□□□□□ -1.98
DNL4YOR005C YNR014WP53719 212 aa2.7□□□□□ -1.98
DNL4YOR005C PEX25Q02969 394 aa2.7□□□□□ -1.98
DNL4YOR005C NRG1Q03125 231 aa2.7□□□□□ -1.98
DNL4YOR005C PLB2Q03674 706 aa2.7□□□□□ -1.98
DNL4YOR005C ERB1Q04660 807 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C GAD1Q04792 585 aa2.7□□□□□ -1.98
DNL4YOR005C RIX7Q07844 837 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C DIA2Q08496 732 aaPredicted RBP2.7□□□□□ -1.98
DNL4YOR005C HSP42Q12329 375 aa2.7□□□□□ -1.98
DNL4YOR005C PDH1Q12428 516 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C SEC12P11655 471 aa2.69□□□□□ -1.98
DNL4YOR005C RRP7P25368 297 aaPredicted RBP2.69□□□□□ -1.98
DNL4YOR005C YCR015CP25616 317 aa2.69□□□□□ -1.98
DNL4YOR005C TOS1P38288 455 aa2.69□□□□□ -1.98
DNL4YOR005C GDI1P39958 451 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C TFG2P41896 400 aaPredicted RBP2.69□□□□□ -1.98
DNL4YOR005C SAE2P46946 345 aa2.69□□□□□ -1.98
DNL4YOR005C PRY1P47032 299 aa2.69□□□□□ -1.98
DNL4YOR005C MRPS35P53292 345 aa2.69□□□□□ -1.98
DNL4YOR005C ORC3P54790 616 aa2.69□□□□□ -1.98
DNL4YOR005C PRP42Q03776 544 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C AIM32Q04689 311 aa2.69□□□□□ -1.98
DNL4YOR005C RRP9Q06506 573 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C YFT2Q06676 274 aa2.69□□□□□ -1.98
DNL4YOR005C SPE4Q12455 300 aa2.69□□□□□ -1.98
DNL4YOR005C DDP1Q99321 188 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C CAF20P12962 161 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C VMA2P16140 517 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C URK1P27515 501 aa2.69□□□□□ -1.98
DNL4YOR005C STB6P36085 766 aa2.69□□□□□ -1.98
DNL4YOR005C CST26P38226 397 aa2.69□□□□□ -1.98
DNL4YOR005C COS111P38308 924 aa2.69□□□□□ -1.98
DNL4YOR005C RPP1P38786 293 aa2.69□□□□□ -1.98
DNL4YOR005C RTS1P38903 757 aa2.69□□□□□ -1.98
DNL4YOR005C YJL193WP39542 402 aa2.69□□□□□ -1.98
DNL4YOR005C JHD1P40034 492 aa2.69□□□□□ -1.98
DNL4YOR005C BAP3P41815 604 aa2.69□□□□□ -1.98
DNL4YOR005C MTL1P53214 551 aa2.69□□□□□ -1.98
DNL4YOR005C OAZ1Q02803 292 aa2.69□□□□□ -1.98
DNL4YOR005C SKG3Q06315 1026 aa2.69□□□□□ -1.98
DNL4YOR005C CUE5Q08412 411 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C YPL272CQ08984 517 aa2.69□□□□□ -1.98
DNL4YOR005C ERG27Q12452 347 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C TRM11Q12463 433 aa2.69□□□□□ -1.98
DNL4YOR005C TY1B-AO13527 1196 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C AI1P03875 834 aa2.69□□□□□ -1.98
DNL4YOR005C GCD1P09032 578 aaPredicted RBP2.69□□□□□ -1.98
DNL4YOR005C CDC6P09119 513 aa2.69□□□□□ -1.98
DNL4YOR005C STE11P23561 717 aa2.69□□□□□ -1.98
DNL4YOR005C FEN2P25621 512 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C SWC3P31376 625 aa2.69□□□□□ -1.98
DNL4YOR005C PRX1P34227 261 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C MED8P38304 223 aa2.69□□□□□ -1.98
DNL4YOR005C RTT107P38850 1070 aa2.69□□□□□ -1.98
DNL4YOR005C YIL077CP40508 320 aa2.69□□□□□ -1.98
DNL4YOR005C YFL066CP43538 392 aa2.69□□□□□ -1.98
DNL4YOR005C GCV2P49095 1034 aa2.69□□□□□ -1.98
DNL4YOR005C ART5P53244 586 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C BNI5P53890 448 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C MTG1Q03151 367 aaPredicted RBP2.69□□□□□ -1.98
DNL4YOR005C HOT1Q03213 719 aa2.69□□□□□ -1.98
DNL4YOR005C CTK1Q03957 528 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C STP3Q05937 343 aa2.69□□□□□ -1.98
DNL4YOR005C RGC1Q06108 1083 aaKnown RBP2.69□□□□□ -1.98
DNL4YOR005C YEH1Q07804 573 aa2.69□□□□□ -1.98
DNL4YOR005C HMI1Q12039 706 aa2.69□□□□□ -1.98
DNL4YOR005C YJR112W-AQ3E743 109 aa2.69□□□□□ -1.98
DNL4YOR005C ISN1Q99312 450 aa2.69□□□□□ -1.98
DNL4YOR005C DFR1P07807 211 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
DNL4YOR005C SEC15P22224 910 aa2.68□□□□□ -1.98
DNL4YOR005C VPS34P22543 875 aa2.68□□□□□ -1.98
DNL4YOR005C POL4P25615 582 aa2.68□□□□□ -1.98
DNL4YOR005C YCR061WP25639 631 aa2.68□□□□□ -1.98
DNL4YOR005C URA7P28274 579 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C DSS4P32601 143 aa2.68□□□□□ -1.98
DNL4YOR005C RRP1P35178 278 aaPredicted RBP2.68□□□□□ -1.98
DNL4YOR005C TMN3P40071 706 aa2.68□□□□□ -1.98
DNL4YOR005C PFK26P40433 827 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C LCB2P40970 561 aa2.68□□□□□ -1.98
DNL4YOR005C IDS2P46958 469 aa2.68□□□□□ -1.98
DNL4YOR005C GTF1P53260 183 aaPredicted RBP2.68□□□□□ -1.98
DNL4YOR005C SML1Q04964 104 aa2.68□□□□□ -1.98
DNL4YOR005C YDR341CQ05506 607 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C RIM20Q12033 661 aa2.68□□□□□ -1.98
DNL4YOR005C NFI1Q12216 726 aa2.68□□□□□ -1.98
DNL4YOR005C SKS1Q12505 502 aa2.68□□□□□ -1.98
DNL4YOR005C PNO1Q99216 274 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C ADE6P38972 1358 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C DUR1,2P32528 1835 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C YML003WP0CF16 290 aa2.68□□□□□ -1.98
DNL4YOR005C SRP54P20424 541 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms