RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C ASP3-3P0CX78 362 aa3.04□□□□□ -1.92
PRE8YML092C ASP3-4P0CX79 362 aa3.04□□□□□ -1.92
PRE8YML092C ASP3-1P0CZ17 362 aa3.04□□□□□ -1.92
PRE8YML092C HMG1P12683 1054 aa3.04□□□□□ -1.92
PRE8YML092C MTF1P14908 341 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C SFL1P20134 766 aa3.04□□□□□ -1.92
PRE8YML092C ISY1P21374 235 aaPredicted RBP3.04□□□□□ -1.92
PRE8YML092C VPS3P23643 1011 aa3.04□□□□□ -1.92
PRE8YML092C RPC53P25441 422 aa3.04□□□□□ -1.92
PRE8YML092C PCL2P25693 308 aa3.04□□□□□ -1.92
PRE8YML092C GAC1P28006 793 aa3.04□□□□□ -1.92
PRE8YML092C SFP1P32432 683 aa3.04□□□□□ -1.92
PRE8YML092C YEL1P34225 687 aa3.04□□□□□ -1.92
PRE8YML092C CRP1P38845 465 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C RIX1P38883 763 aaPredicted RBP3.04□□□□□ -1.92
PRE8YML092C PCF11P39081 626 aaPredicted RBP3.04□□□□□ -1.92
PRE8YML092C SET2P46995 733 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C ASN1P49089 572 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C SHE10P53075 577 aa3.04□□□□□ -1.92
PRE8YML092C ARP5P53946 755 aa3.04□□□□□ -1.92
PRE8YML092C ARP4P80428 489 aa3.04□□□□□ -1.92
PRE8YML092C GPD1Q00055 391 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C UTP14Q04500 899 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C EIS1Q05050 843 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C RGC1Q06108 1083 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C ATG33Q06485 197 aa3.04□□□□□ -1.92
PRE8YML092C GET3Q12154 354 aaKnown RBP3.04□□□□□ -1.92
PRE8YML092C TIP41Q12199 356 aa3.04□□□□□ -1.92
PRE8YML092C ACC1Q00955 2233 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C HSP82P02829 709 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C SIR3P06701 978 aa3.03□□□□□ -1.92
PRE8YML092C SSB1P11484 613 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C REV1P12689 985 aa3.03□□□□□ -1.92
PRE8YML092C ALG1P16661 449 aa3.03□□□□□ -1.92
PRE8YML092C SEC15P22224 910 aa3.03□□□□□ -1.92
PRE8YML092C UBP13P38187 747 aa3.03□□□□□ -1.92
PRE8YML092C TIF5P38431 405 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C WSC4P38739 605 aa3.03□□□□□ -1.92
PRE8YML092C BDH2P39713 417 aa3.03□□□□□ -1.92
PRE8YML092C SSB2P40150 613 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C BTT1P40314 149 aaPredicted RBP3.03□□□□□ -1.92
PRE8YML092C ERG10P41338 398 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C THI6P41835 540 aa3.03□□□□□ -1.92
PRE8YML092C CCT7P42943 550 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C IES1P43579 692 aa3.03□□□□□ -1.92
PRE8YML092C SCD6P45978 349 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
PRE8YML092C CUE3P53137 624 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C CEG1Q01159 459 aaPredicted RBP3.03□□□□□ -1.92
PRE8YML092C TFB2Q02939 513 aa3.03□□□□□ -1.92
PRE8YML092C MLH3Q12083 715 aa3.03□□□□□ -1.92
PRE8YML092C SGT2Q12118 346 aaKnown RBP3.03□□□□□ -1.92
PRE8YML092C CHS1P08004 1131 aa3.02□□□□□ -1.93
PRE8YML092C TUB1P09733 447 aaKnown RBP3.02□□□□□ -1.93
PRE8YML092C CKA2P19454 339 aa3.02□□□□□ -1.93
PRE8YML092C TKL2P33315 681 aa3.02□□□□□ -1.93
PRE8YML092C PIG2P40187 538 aa3.02□□□□□ -1.93
PRE8YML092C YIL161WP40449 235 aaKnown RBP3.02□□□□□ -1.93
PRE8YML092C NOP9P47077 666 aaKnown RBP3.02□□□□□ -1.93
PRE8YML092C HSH155P49955 971 aaKnown RBP3.02□□□□□ -1.93
PRE8YML092C FHN1P53279 174 aa3.02□□□□□ -1.93
PRE8YML092C ATG4P53867 494 aa3.02□□□□□ -1.93
PRE8YML092C APM1Q00776 475 aaPredicted RBP3.02□□□□□ -1.93
PRE8YML092C WAR1Q03631 944 aa3.02□□□□□ -1.93
PRE8YML092C SEG1Q04279 960 aa3.02□□□□□ -1.93
PRE8YML092C COG8Q04632 607 aa3.02□□□□□ -1.93
PRE8YML092C PRM6Q04705 352 aa3.02□□□□□ -1.93
PRE8YML092C CUR1Q06469 252 aa3.02□□□□□ -1.93
PRE8YML092C GPM2Q12008 311 aa3.02□□□□□ -1.93
PRE8YML092C FOB1O13329 566 aa3.01□□□□□ -1.93
PRE8YML092C MSF1P08425 469 aa3.01□□□□□ -1.93
PRE8YML092C ERG20P08524 352 aaKnown RBP3.01□□□□□ -1.93
PRE8YML092C ABF1P14164 731 aa3.01□□□□□ -1.93
PRE8YML092C THR1P17423 357 aaKnown RBP3.01□□□□□ -1.93
PRE8YML092C IME1P21190 360 aa3.01□□□□□ -1.93
PRE8YML092C ADY2P25613 283 aa3.01□□□□□ -1.93
PRE8YML092C TFB1P32776 642 aa3.01□□□□□ -1.93
PRE8YML092C FRE1P32791 686 aa3.01□□□□□ -1.93
PRE8YML092C YBR225WP38321 900 aa3.01□□□□□ -1.93
PRE8YML092C LEU5P38702 357 aa3.01□□□□□ -1.93
PRE8YML092C FHL1P39521 936 aa3.01□□□□□ -1.93
PRE8YML092C AVT2P39981 480 aa3.01□□□□□ -1.93
PRE8YML092C OSW5P40219 148 aa3.01□□□□□ -1.93
PRE8YML092C VEL1P53058 206 aa3.01□□□□□ -1.93
PRE8YML092C RNH70P53331 553 aa3.01□□□□□ -1.93
PRE8YML092C TDA7P53882 636 aaPredicted RBP3.01□□□□□ -1.93
PRE8YML092C NOP13P53883 403 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
PRE8YML092C SMA1Q02651 245 aa3.01□□□□□ -1.93
PRE8YML092C ECM22Q05958 814 aaPredicted RBP3.01□□□□□ -1.93
PRE8YML092C TSR1Q07381 788 aaKnown RBP3.01□□□□□ -1.93
PRE8YML092C YOR387CQ08910 206 aa3.01□□□□□ -1.93
PRE8YML092C TAF10Q12030 206 aa3.01□□□□□ -1.93
PRE8YML092C YPR027CQ12079 277 aa3.01□□□□□ -1.93
PRE8YML092C TAF3Q12297 353 aa3.01□□□□□ -1.93
PRE8YML092C NBL1Q3E7Y6 73 aa3.01□□□□□ -1.93
PRE8YML092C YBR056W-AI2HB52 66 aa3□□□□□ -1.93
PRE8YML092C RPN13O13563 156 aa3□□□□□ -1.93
PRE8YML092C MUD1P32605 298 aaKnown RBP3□□□□□ -1.93
PRE8YML092C RML2P32611 393 aa3□□□□□ -1.93
PRE8YML092C SRX1P36077 127 aa3□□□□□ -1.93
PRE8YML092C SET3P36124 751 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms