RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W CTF3Q12748 733 aa2.6□□□□□ -1.99
SDC25YLL016W PNO1Q99216 274 aaKnown RBP2.6□□□□□ -1.99
SDC25YLL016W GLT1Q12680 2145 aaKnown RBP2.6□□□□□ -1.99
SDC25YLL016W APE1P14904 514 aa2.6□□□□□ -1.99
SDC25YLL016W GRR1P24814 1151 aa2.6□□□□□ -1.99
SDC25YLL016W CDS1P38221 457 aa2.6□□□□□ -1.99
SDC25YLL016W EHT1P38295 451 aa2.6□□□□□ -1.99
SDC25YLL016W YHR054CP38780 354 aa2.6□□□□□ -1.99
SDC25YLL016W CTF8P38877 133 aa2.6□□□□□ -1.99
SDC25YLL016W MAF1P41910 395 aa2.6□□□□□ -1.99
SDC25YLL016W BUD27P43573 796 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SDC25YLL016W VPS4P52917 437 aa2.6□□□□□ -1.99
SDC25YLL016W DIA2Q08496 732 aaPredicted RBP2.6□□□□□ -1.99
SDC25YLL016W SPE3Q12074 293 aaKnown RBP2.6□□□□□ -1.99
SDC25YLL016W YMR084WA2P2R3 262 aa2.59□□□□□ -1.99
SDC25YLL016W TUF1P02992 437 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W SPE1P08432 466 aa2.59□□□□□ -1.99
SDC25YLL016W PHO84P25297 587 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W POT1P27796 417 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
SDC25YLL016W RIB7P33312 244 aa2.59□□□□□ -1.99
SDC25YLL016W TDP1P38319 544 aa2.59□□□□□ -1.99
SDC25YLL016W OTU2P38747 307 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W PTC7P38797 343 aa2.59□□□□□ -1.99
SDC25YLL016W BIT61P47041 543 aa2.59□□□□□ -1.99
SDC25YLL016W TAM41P53230 385 aa2.59□□□□□ -1.99
SDC25YLL016W GCR2Q01722 534 aa2.59□□□□□ -1.99
SDC25YLL016W MSC2Q03455 724 aa2.59□□□□□ -1.99
SDC25YLL016W EFR3Q03653 782 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W YDR239CQ03780 787 aa2.59□□□□□ -1.99
SDC25YLL016W RBA50Q04418 439 aa2.59□□□□□ -1.99
SDC25YLL016W HOF1Q05080 669 aa2.59□□□□□ -1.99
SDC25YLL016W SWA2Q06677 668 aa2.59□□□□□ -1.99
SDC25YLL016W VAM6Q07468 1049 aa2.59□□□□□ -1.99
SDC25YLL016W WHI4Q07655 649 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W CFT2Q12102 859 aaPredicted RBP2.59□□□□□ -1.99
SDC25YLL016W MDY2Q12285 212 aa2.59□□□□□ -1.99
SDC25YLL016W MLP1Q02455 1875 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W PRE2P30656 287 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W SSE1P32589 693 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W PGM1P33401 570 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W AUR1P36107 401 aaPredicted RBP2.59□□□□□ -1.99
SDC25YLL016W GND1P38720 489 aaKnown RBP2.59□□□□□ -1.99
SDC25YLL016W AKR1P39010 764 aa2.59□□□□□ -1.99
SDC25YLL016W MET18P40469 1032 aa2.59□□□□□ -1.99
SDC25YLL016W AAD10P47182 288 aa2.59□□□□□ -1.99
SDC25YLL016W YGR066CP53242 292 aa2.59□□□□□ -1.99
SDC25YLL016W YGR117CP53270 476 aa2.59□□□□□ -1.99
SDC25YLL016W CSL4P53859 292 aaPredicted RBP2.59□□□□□ -1.99
SDC25YLL016W ARG5,6Q01217 863 aa2.59□□□□□ -1.99
SDC25YLL016W MCM21Q06675 368 aa2.59□□□□□ -1.99
SDC25YLL016W GAS5Q08193 484 aa2.59□□□□□ -1.99
SDC25YLL016W TUP1P16649 713 aa2.59□□□□□ -2
SDC25YLL016W RRP43P25359 394 aaPredicted RBP2.59□□□□□ -2
SDC25YLL016W ERV1P27882 189 aa2.59□□□□□ -2
SDC25YLL016W MTC7P32633 139 aa2.59□□□□□ -2
SDC25YLL016W TAT1P38085 619 aa2.59□□□□□ -2
SDC25YLL016W UBP13P38187 747 aa2.59□□□□□ -2
SDC25YLL016W CST26P38226 397 aa2.59□□□□□ -2
SDC25YLL016W VID24P38263 362 aa2.59□□□□□ -2
SDC25YLL016W CRG1P38892 291 aaRIP-Chip data2.59□□□□□ -2not detected
SDC25YLL016W FTR1P40088 404 aa2.59□□□□□ -2
SDC25YLL016W RGI2P40188 164 aa2.59□□□□□ -2
SDC25YLL016W YFL066CP43538 392 aa2.59□□□□□ -2
SDC25YLL016W ROY1Q04847 553 aa2.59□□□□□ -2
SDC25YLL016W ECM22Q05958 814 aaPredicted RBP2.59□□□□□ -2
SDC25YLL016W AIM6Q07716 390 aa2.59□□□□□ -2
SDC25YLL016W POM34Q12445 299 aa2.59□□□□□ -2
SDC25YLL016W YOR019WQ99248 730 aa2.59□□□□□ -2
SDC25YLL016W LYS2P07702 1392 aa2.58□□□□□ -2
SDC25YLL016W CET1O13297 549 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W BIK1P11709 440 aa2.58□□□□□ -2
SDC25YLL016W EST1P17214 699 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W RNR1P21524 888 aaKnown RBP2.58□□□□□ -2
SDC25YLL016W GYP6P32806 458 aa2.58□□□□□ -2
SDC25YLL016W ATG19P35193 415 aa2.58□□□□□ -2
SDC25YLL016W POL12P38121 705 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W SIF2P38262 535 aa2.58□□□□□ -2
SDC25YLL016W YBR259WP38338 688 aa2.58□□□□□ -2
SDC25YLL016W MUP3P38734 546 aa2.58□□□□□ -2
SDC25YLL016W WSS1P38838 269 aa2.58□□□□□ -2
SDC25YLL016W MTG2P38860 518 aa2.58□□□□□ -2
SDC25YLL016W MPT5P39016 859 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SDC25YLL016W SLZ1P40167 298 aa2.58□□□□□ -2
SDC25YLL016W YFL040WP43562 540 aa2.58□□□□□ -2
SDC25YLL016W YNR068CP53754 272 aa2.58□□□□□ -2
SDC25YLL016W TOF1P53840 1238 aa2.58□□□□□ -2
SDC25YLL016W BUD22Q04347 519 aaKnown RBP2.58□□□□□ -2
SDC25YLL016W YJR112W-AQ3E743 109 aa2.58□□□□□ -2
SDC25YLL016W SSK22P25390 1331 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W RPL3P14126 387 aaKnown RBP2.58□□□□□ -2
SDC25YLL016W KAR3P17119 729 aa2.58□□□□□ -2
SDC25YLL016W YHR112CP38716 378 aa2.58□□□□□ -2
SDC25YLL016W LNP1P38878 278 aa2.58□□□□□ -2
SDC25YLL016W REV7P38927 245 aa2.58□□□□□ -2
SDC25YLL016W ROK1P45818 564 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W MNP1P53163 194 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W GTF1P53260 183 aaPredicted RBP2.58□□□□□ -2
SDC25YLL016W ASI2P53895 289 aa2.58□□□□□ -2
SDC25YLL016W MUB1Q03162 620 aa2.58□□□□□ -2
SDC25YLL016W HOT1Q03213 719 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms