RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W BUD8P41698 603 aa2.39□□□□□ -2.03
NUP100YKL068W BUD27P43573 796 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
NUP100YKL068W ARC1P46672 376 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W HDA1P53973 706 aa2.39□□□□□ -2.03
NUP100YKL068W YAP6Q03935 383 aa2.39□□□□□ -2.03
NUP100YKL068W DIB1Q06819 143 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W STP4Q07351 490 aa2.39□□□□□ -2.03
NUP100YKL068W LUC7Q07508 261 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W AAD4Q07747 329 aa2.39□□□□□ -2.03
NUP100YKL068W NMD4Q12129 218 aa2.39□□□□□ -2.03
NUP100YKL068W NBP2Q12163 236 aa2.39□□□□□ -2.03
NUP100YKL068W PFK27Q12471 397 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W CTF3Q12748 733 aa2.39□□□□□ -2.03
NUP100YKL068W ARG1P22768 420 aa2.38□□□□□ -2.03
NUP100YKL068W HCM1P25364 564 aa2.38□□□□□ -2.03
NUP100YKL068W LRG1P35688 1017 aa2.38□□□□□ -2.03
NUP100YKL068W YSW1P38280 609 aa2.38□□□□□ -2.03
NUP100YKL068W ACO2P39533 789 aa2.38□□□□□ -2.03
NUP100YKL068W FLC2P39719 783 aa2.38□□□□□ -2.03
NUP100YKL068W JHD1P40034 492 aa2.38□□□□□ -2.03
NUP100YKL068W PKP1P40530 394 aa2.38□□□□□ -2.03
NUP100YKL068W YJL045WP47052 634 aa2.38□□□□□ -2.03
NUP100YKL068W BPL1P48445 690 aaPredicted RBP2.38□□□□□ -2.03
NUP100YKL068W RPN14P53196 417 aa2.38□□□□□ -2.03
NUP100YKL068W RCR2Q03446 210 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W ATG38Q05789 226 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W STP3Q05937 343 aa2.38□□□□□ -2.03
NUP100YKL068W RRT8Q08219 342 aa2.38□□□□□ -2.03
NUP100YKL068W CHS5Q12114 671 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W HOS1Q12214 470 aa2.38□□□□□ -2.03
NUP100YKL068W AVL9Q12500 764 aa2.38□□□□□ -2.03
NUP100YKL068W SEC39Q12745 709 aa2.38□□□□□ -2.03
NUP100YKL068W UBR2Q07963 1872 aa2.38□□□□□ -2.03
NUP100YKL068W RPB2P08518 1224 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W TY2A-LR1P0C2J4 438 aa2.38□□□□□ -2.03
NUP100YKL068W TY2A-FP0CX61 438 aa2.38□□□□□ -2.03
NUP100YKL068W TY2A-GR2P0CX62 438 aa2.38□□□□□ -2.03
NUP100YKL068W PUT4P15380 627 aa2.38□□□□□ -2.03
NUP100YKL068W DAP2P18962 818 aa2.38□□□□□ -2.03
NUP100YKL068W PWP1P21304 576 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W NAR1P23503 491 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W TY2A-CP25383 438 aa2.38□□□□□ -2.03
NUP100YKL068W CWH43P25618 953 aa2.38□□□□□ -2.03
NUP100YKL068W YEL043WP32618 956 aa2.38□□□□□ -2.03
NUP100YKL068W SRP101P32916 621 aa2.38□□□□□ -2.03
NUP100YKL068W PIM1P36775 1133 aa2.38□□□□□ -2.03
NUP100YKL068W SMC2P38989 1170 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W ARB1P40024 610 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W SGN1P40561 250 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
NUP100YKL068W YIR007WP40566 764 aa2.38□□□□□ -2.03
NUP100YKL068W BST1P43571 1029 aa2.38□□□□□ -2.03
NUP100YKL068W GLO1P50107 326 aa2.38□□□□□ -2.03
NUP100YKL068W CUE3P53137 624 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W SOK2P53438 785 aaPredicted RBP2.38□□□□□ -2.03
NUP100YKL068W TY2A-DR2Q03483 438 aa2.38□□□□□ -2.03
NUP100YKL068W INP2Q03824 705 aa2.38□□□□□ -2.03
NUP100YKL068W THI22Q06490 572 aa2.38□□□□□ -2.03
NUP100YKL068W LYS21Q12122 440 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W TY2A-BQ12260 438 aa2.38□□□□□ -2.03
NUP100YKL068W TY2A-OR2Q12293 438 aa2.38□□□□□ -2.03
NUP100YKL068W TY2A-DR1Q12392 438 aa2.38□□□□□ -2.03
NUP100YKL068W TY2A-OR1Q12439 438 aa2.38□□□□□ -2.03
NUP100YKL068W TY2A-DR3Q99303 438 aa2.38□□□□□ -2.03
NUP100YKL068W ADE6P38972 1358 aaKnown RBP2.38□□□□□ -2.03
NUP100YKL068W PRE8P23639 250 aa2.37□□□□□ -2.03
NUP100YKL068W ERG8P24521 451 aa2.37□□□□□ -2.03
NUP100YKL068W RPS7AP26786 190 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W NTG1P31378 399 aa2.37□□□□□ -2.03
NUP100YKL068W SFA1P32771 386 aa2.37□□□□□ -2.03
NUP100YKL068W MRP4P32902 394 aa2.37□□□□□ -2.03
NUP100YKL068W UBP11P36026 717 aa2.37□□□□□ -2.03
NUP100YKL068W ALY1P36117 915 aa2.37□□□□□ -2.03
NUP100YKL068W DAD2P36162 133 aa2.37□□□□□ -2.03
NUP100YKL068W MRPL40P36534 297 aa2.37□□□□□ -2.03
NUP100YKL068W KSP1P38691 1029 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W FSH1P38777 243 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W SSP120P39931 234 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W IST3P40565 148 aaPredicted RBP2.37□□□□□ -2.03
NUP100YKL068W ZAP1P47043 880 aa2.37□□□□□ -2.03
NUP100YKL068W ALT2P52892 507 aa2.37□□□□□ -2.03
NUP100YKL068W EXG2P52911 562 aa2.37□□□□□ -2.03
NUP100YKL068W IMA1P53051 589 aa2.37□□□□□ -2.03
NUP100YKL068W PUS2P53167 370 aa2.37□□□□□ -2.03
NUP100YKL068W MDR1P53258 950 aa2.37□□□□□ -2.03
NUP100YKL068W LSC1P53598 329 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W PDR16P53860 351 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W MRD1Q06106 887 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W THI21Q08975 551 aa2.37□□□□□ -2.03
NUP100YKL068W SLP1Q12232 587 aa2.37□□□□□ -2.03
NUP100YKL068W HER1Q12276 1246 aa2.37□□□□□ -2.03
NUP100YKL068W CDC42P19073 191 aa2.37□□□□□ -2.03
NUP100YKL068W ADE2P21264 571 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W CPR2P23285 205 aa2.37□□□□□ -2.03
NUP100YKL068W RRP43P25359 394 aaPredicted RBP2.37□□□□□ -2.03
NUP100YKL068W PHO91P27514 894 aa2.37□□□□□ -2.03
NUP100YKL068W PAP1P29468 568 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W ERG7P38604 731 aa2.37□□□□□ -2.03
NUP100YKL068W DED81P38707 554 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W RGI2P40188 164 aa2.37□□□□□ -2.03
NUP100YKL068W MAF1P41910 395 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms