RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W SWA2Q06677 668 aa4.84□□□□□ -1.63
YJR028WYJR028W KIN3P22209 435 aa4.83□□□□□ -1.64
YJR028WYJR028W ROX1P25042 368 aa4.83□□□□□ -1.64
YJR028WYJR028W MRPL9P31334 269 aa4.83□□□□□ -1.64
YJR028WYJR028W PDB1P32473 366 aaKnown RBP4.83□□□□□ -1.64
YJR028WYJR028W AUR1P36107 401 aaPredicted RBP4.83□□□□□ -1.64
YJR028WYJR028W KTR3P38130 404 aaPredicted RBP4.83□□□□□ -1.64
YJR028WYJR028W YNG2P38806 282 aaKnown RBP4.83□□□□□ -1.64
YJR028WYJR028W UTP9P38882 575 aaKnown RBP4.83□□□□□ -1.64
YJR028WYJR028W CCT6P39079 546 aa4.83□□□□□ -1.64
YJR028WYJR028W GND2P53319 492 aa4.83□□□□□ -1.64
YJR028WYJR028W DCP2P53550 970 aaKnown RBP4.83□□□□□ -1.64
YJR028WYJR028W TIM44Q01852 431 aa4.83□□□□□ -1.64
YJR028WYJR028W FCP1Q03254 732 aa4.83□□□□□ -1.64
YJR028WYJR028W GIS1Q03833 894 aa4.83□□□□□ -1.64
YJR028WYJR028W SYF1Q04048 859 aaPredicted RBP4.83□□□□□ -1.64
YJR028WYJR028W SPN1Q06505 410 aaPredicted RBP4.83□□□□□ -1.64
YJR028WYJR028W RAD34Q06665 692 aa4.83□□□□□ -1.64
YJR028WYJR028W MRH1Q12117 320 aaPredicted RBP4.83□□□□□ -1.64
YJR028WYJR028W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
YJR028WYJR028W MET17P06106 444 aa4.82□□□□□ -1.64
YJR028WYJR028W STE12P13574 688 aa4.82□□□□□ -1.64
YJR028WYJR028W MTH1P35198 433 aa4.82□□□□□ -1.64
YJR028WYJR028W SEC31P38968 1273 aaKnown RBP4.82□□□□□ -1.64
YJR028WYJR028W LSM5P40089 93 aaKnown RBP4.82□□□□□ -1.64
YJR028WYJR028W ARF3P40994 183 aaRIP-Chip data4.82□□□□□ -1.64not detected
YJR028WYJR028W UBX6P47049 396 aa4.82□□□□□ -1.64
YJR028WYJR028W GLO1P50107 326 aa4.82□□□□□ -1.64
YJR028WYJR028W ARP9Q05123 467 aa4.82□□□□□ -1.64
YJR028WYJR028W RCN2Q12044 265 aa4.82□□□□□ -1.64
YJR028WYJR028W AHA1Q12449 350 aaKnown RBP4.82□□□□□ -1.64
YJR028WYJR028W RED1P14291 827 aa4.81□□□□□ -1.64
YJR028WYJR028W PWP1P21304 576 aaKnown RBP4.81□□□□□ -1.64
YJR028WYJR028W DMC1P25453 334 aa4.81□□□□□ -1.64
YJR028WYJR028W POL4P25615 582 aa4.81□□□□□ -1.64
YJR028WYJR028W CDC15P27636 974 aa4.81□□□□□ -1.64
YJR028WYJR028W EXO1P39875 702 aa4.81□□□□□ -1.64
YJR028WYJR028W YEL057CP39983 233 aa4.81□□□□□ -1.64
YJR028WYJR028W MET28P40573 187 aa4.81□□□□□ -1.64
YJR028WYJR028W OPT1P40897 799 aa4.81□□□□□ -1.64
YJR028WYJR028W VPS73P53142 486 aaKnown RBP4.81□□□□□ -1.64
YJR028WYJR028W CYK3Q07533 885 aa4.81□□□□□ -1.64
YJR028WYJR028W YEH1Q07804 573 aa4.81□□□□□ -1.64
YJR028WYJR028W RRG1Q12167 365 aaPredicted RBP4.81□□□□□ -1.64
YJR028WYJR028W YMR084WA2P2R3 262 aa4.8□□□□□ -1.64
YJR028WYJR028W CBS1P14066 229 aa4.8□□□□□ -1.64
YJR028WYJR028W OCA4P25366 362 aa4.8□□□□□ -1.64
YJR028WYJR028W CIR1P42940 261 aa4.8□□□□□ -1.64
YJR028WYJR028W RSM28Q03430 361 aa4.8□□□□□ -1.64
YJR028WYJR028W TCO89Q08921 799 aa4.8□□□□□ -1.64
YJR028WYJR028W GRX6Q12438 231 aa4.8□□□□□ -1.64
YJR028WYJR028W YJR112W-AQ3E743 109 aa4.8□□□□□ -1.64
YJR028WYJR028W RTC1Q08281 1341 aa4.8□□□□□ -1.64
YJR028WYJR028W CDC43P18898 376 aa4.79□□□□□ -1.64
YJR028WYJR028W LCB1P25045 558 aaKnown RBP4.79□□□□□ -1.64
YJR028WYJR028W SAT4P25333 603 aaKnown RBP4.79□□□□□ -1.64
YJR028WYJR028W AAD3P25612 363 aa4.79□□□□□ -1.64
YJR028WYJR028W PTC6P25646 442 aa4.79□□□□□ -1.64
YJR028WYJR028W YMC1P32331 307 aa4.79□□□□□ -1.64
YJR028WYJR028W GSH1P32477 678 aa4.79□□□□□ -1.64
YJR028WYJR028W SRO77P38163 1010 aa4.79□□□□□ -1.64
YJR028WYJR028W MET18P40469 1032 aa4.79□□□□□ -1.64
YJR028WYJR028W ROK1P45818 564 aaPredicted RBP4.79□□□□□ -1.64
YJR028WYJR028W SAE2P46946 345 aa4.79□□□□□ -1.64
YJR028WYJR028W STR3P53101 465 aaKnown RBP4.79□□□□□ -1.64
YJR028WYJR028W JJJ1P53863 590 aa4.79□□□□□ -1.64
YJR028WYJR028W RPT6Q01939 405 aaKnown RBP4.79□□□□□ -1.64
YJR028WYJR028W YML037CQ03703 340 aa4.79□□□□□ -1.64
YJR028WYJR028W PSR1Q07800 427 aa4.79□□□□□ -1.64
YJR028WYJR028W LEA1Q08963 238 aaPredicted RBP4.79□□□□□ -1.64
YJR028WYJR028W ATG9Q12142 997 aa4.79□□□□□ -1.64
YJR028WYJR028W SUT2Q12286 268 aa4.79□□□□□ -1.64
YJR028WYJR028W YPT6Q99260 215 aa4.79□□□□□ -1.64
YJR028WYJR028W SEC3P33332 1336 aaKnown RBP4.79□□□□□ -1.64
YJR028WYJR028W AQY1P0CD91 305 aa4.78□□□□□ -1.64
YJR028WYJR028W FUR1P18562 216 aaKnown RBP4.78□□□□□ -1.64
YJR028WYJR028W MAK32P23060 363 aa4.78□□□□□ -1.64
YJR028WYJR028W UGP1P32861 499 aaKnown RBP4.78□□□□□ -1.64
YJR028WYJR028W ADE17P38009 592 aaKnown RBP4.78□□□□□ -1.64
YJR028WYJR028W DIA4P38705 446 aaPredicted RBP4.78□□□□□ -1.64
YJR028WYJR028W ECM10P39987 644 aa4.78□□□□□ -1.64
YJR028WYJR028W YEL020CP39994 560 aa4.78□□□□□ -1.64
YJR028WYJR028W CTK2P46962 323 aa4.78□□□□□ -1.64
YJR028WYJR028W LCL3P53153 274 aa4.78□□□□□ -1.64
YJR028WYJR028W MDG1P53885 366 aa4.78□□□□□ -1.64
YJR028WYJR028W LYS21Q12122 440 aaKnown RBP4.78□□□□□ -1.64
YJR028WYJR028W GET3Q12154 354 aaKnown RBP4.78□□□□□ -1.64
YJR028WYJR028W RTN2Q12443 393 aa4.78□□□□□ -1.64
YJR028WYJR028W ARD1P07347 238 aaPredicted RBP4.77□□□□□ -1.65
YJR028WYJR028W PET111P08468 800 aa4.77□□□□□ -1.65
YJR028WYJR028W RPC53P25441 422 aa4.77□□□□□ -1.65
YJR028WYJR028W PEP3P27801 918 aa4.77□□□□□ -1.65
YJR028WYJR028W MNN2P38069 597 aa4.77□□□□□ -1.65
YJR028WYJR028W SGN1P40561 250 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
YJR028WYJR028W AXL1P40851 1208 aa4.77□□□□□ -1.65
YJR028WYJR028W CDC1P40986 491 aa4.77□□□□□ -1.65
YJR028WYJR028W GPD2P41911 440 aaKnown RBP4.77□□□□□ -1.65
YJR028WYJR028W MRK1P50873 501 aa4.77□□□□□ -1.65
YJR028WYJR028W YPR003CP53394 754 aa4.77□□□□□ -1.65
YJR028WYJR028W YDR131CQ03899 556 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms