RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C IES5P40060 125 aa3.91□□□□□ -1.78
CTK2YJL006C TRS130Q03660 1102 aa3.91□□□□□ -1.78
CTK2YJL006C VMS1Q04311 632 aaKnown RBP3.91□□□□□ -1.78
CTK2YJL006C YLR352WQ06479 807 aa3.91□□□□□ -1.78
CTK2YJL006C RVB2Q12464 471 aaKnown RBP3.91□□□□□ -1.78
CTK2YJL006C HNM1P19807 563 aa3.9□□□□□ -1.79
CTK2YJL006C YCL049CP25577 312 aa3.9□□□□□ -1.79
CTK2YJL006C GCD7P32502 381 aaPredicted RBP3.9□□□□□ -1.79
CTK2YJL006C EFM2P38347 419 aa3.9□□□□□ -1.79
CTK2YJL006C BUD16P39988 312 aa3.9□□□□□ -1.79
CTK2YJL006C CUL3P53202 744 aa3.9□□□□□ -1.79
CTK2YJL006C IMP4P53941 290 aaKnown RBP3.9□□□□□ -1.79
CTK2YJL006C ATG16Q03818 150 aa3.9□□□□□ -1.79
CTK2YJL006C BLS1Q06071 122 aa3.9□□□□□ -1.79
CTK2YJL006C NUC1P08466 329 aa3.89□□□□□ -1.79
CTK2YJL006C PWP2P25635 923 aaKnown RBP3.89□□□□□ -1.79
CTK2YJL006C HES1P35843 434 aa3.89□□□□□ -1.79
CTK2YJL006C VPS24P36095 224 aaKnown RBP3.89□□□□□ -1.79
CTK2YJL006C NPR3P38742 1146 aa3.89□□□□□ -1.79
CTK2YJL006C FUN12P39730 1002 aaKnown RBP3.89□□□□□ -1.79
CTK2YJL006C PSF2P40359 213 aa3.89□□□□□ -1.79
CTK2YJL006C ERR3P42222 437 aa3.89□□□□□ -1.79
CTK2YJL006C UBX6P47049 396 aa3.89□□□□□ -1.79
CTK2YJL006C TAM41P53230 385 aa3.89□□□□□ -1.79
CTK2YJL006C ARC35P53731 342 aaKnown RBP3.89□□□□□ -1.79
CTK2YJL006C MRPL13Q02204 264 aa3.89□□□□□ -1.79
CTK2YJL006C MTG1Q03151 367 aaPredicted RBP3.89□□□□□ -1.79
CTK2YJL006C GTB1Q04924 702 aa3.89□□□□□ -1.79
CTK2YJL006C CBP1P07252 654 aa3.88□□□□□ -1.79
CTK2YJL006C YML002WP0CF17 737 aa3.88□□□□□ -1.79
CTK2YJL006C PRP16P15938 1071 aaPredicted RBP3.88□□□□□ -1.79
CTK2YJL006C MRPL36P36531 177 aa3.88□□□□□ -1.79
CTK2YJL006C YJL070CP40361 888 aa3.88□□□□□ -1.79
CTK2YJL006C YGR079WP53249 370 aa3.88□□□□□ -1.79
CTK2YJL006C ATG23Q06671 453 aa3.88□□□□□ -1.79
CTK2YJL006C PSR2Q07949 397 aa3.88□□□□□ -1.79
CTK2YJL006C MTF2P10849 440 aa3.87□□□□□ -1.79
CTK2YJL006C UBC1P21734 215 aaKnown RBP3.87□□□□□ -1.79
CTK2YJL006C SAP185P40856 1058 aa3.87□□□□□ -1.79
CTK2YJL006C ROK1P45818 564 aaPredicted RBP3.87□□□□□ -1.79
CTK2YJL006C IML2P47031 731 aa3.87□□□□□ -1.79
CTK2YJL006C ZAP1P47043 880 aa3.87□□□□□ -1.79
CTK2YJL006C YGR021WP53212 290 aa3.87□□□□□ -1.79
CTK2YJL006C YDR109CQ04585 715 aa3.87□□□□□ -1.79
CTK2YJL006C SMA2Q04658 369 aa3.87□□□□□ -1.79
CTK2YJL006C VAM6Q07468 1049 aa3.87□□□□□ -1.79
CTK2YJL006C GPA1P08539 472 aa3.86□□□□□ -1.79
CTK2YJL006C YML003WP0CF16 290 aa3.86□□□□□ -1.79
CTK2YJL006C RAD24P32641 659 aa3.86□□□□□ -1.79
CTK2YJL006C MRS6P32864 603 aaKnown RBP3.86□□□□□ -1.79
CTK2YJL006C XRS2P33301 854 aa3.86□□□□□ -1.79
CTK2YJL006C NUP120P35729 1037 aa3.86□□□□□ -1.79
CTK2YJL006C ATG27P46989 271 aa3.86□□□□□ -1.79
CTK2YJL006C MSY1P48527 492 aa3.86□□□□□ -1.79
CTK2YJL006C FCP1Q03254 732 aa3.86□□□□□ -1.79
CTK2YJL006C BAG7Q12128 409 aa3.86□□□□□ -1.79
CTK2YJL006C YER145C-AA0A023PYF4 145 aa3.85□□□□□ -1.79
CTK2YJL006C GEX2P36173 615 aa3.85□□□□□ -1.79
CTK2YJL006C FUI1P38196 639 aa3.85□□□□□ -1.79
CTK2YJL006C EXO84P38261 753 aa3.85□□□□□ -1.79
CTK2YJL006C DJP1P40564 432 aa3.85□□□□□ -1.79
CTK2YJL006C SMK1P41808 388 aa3.85□□□□□ -1.79
CTK2YJL006C STP3Q05937 343 aa3.85□□□□□ -1.79
CTK2YJL006C RSA1Q08932 381 aa3.85□□□□□ -1.79
CTK2YJL006C COX17Q12287 69 aa3.85□□□□□ -1.79
CTK2YJL006C ATP2P00830 511 aaKnown RBP3.84□□□□□ -1.79
CTK2YJL006C MRP2P10663 115 aaPredicted RBP3.84□□□□□ -1.79
CTK2YJL006C PMS1P14242 873 aa3.84□□□□□ -1.79
CTK2YJL006C SPO16P17122 198 aa3.84□□□□□ -1.79
CTK2YJL006C LRE1P25579 583 aaKnown RBP3.84□□□□□ -1.79
CTK2YJL006C IFA38P38286 347 aa3.84□□□□□ -1.79
CTK2YJL006C CSL4P53859 292 aaPredicted RBP3.84□□□□□ -1.79
CTK2YJL006C YNL181WP53878 407 aa3.84□□□□□ -1.79
CTK2YJL006C TFC6Q06339 672 aa3.84□□□□□ -1.79
CTK2YJL006C SWT1Q12104 458 aa3.84□□□□□ -1.79
CTK2YJL006C SUI3P09064 285 aaKnown RBP3.83□□□□□ -1.8
CTK2YJL006C MGR1P25573 417 aa3.83□□□□□ -1.8
CTK2YJL006C RFA2P26754 273 aaKnown RBP3.83□□□□□ -1.8
CTK2YJL006C PSY4P38193 441 aa3.83□□□□□ -1.8
CTK2YJL006C LEU5P38702 357 aa3.83□□□□□ -1.8
CTK2YJL006C PHM8P40025 321 aa3.83□□□□□ -1.8
CTK2YJL006C YIL161WP40449 235 aaKnown RBP3.83□□□□□ -1.8
CTK2YJL006C CTF18P49956 741 aa3.83□□□□□ -1.8
CTK2YJL006C SMA1Q02651 245 aa3.83□□□□□ -1.8
CTK2YJL006C CSR1Q06705 408 aaKnown RBP3.83□□□□□ -1.8
CTK2YJL006C PCD1Q12524 340 aa3.83□□□□□ -1.8
CTK2YJL006C SSM4P40318 1319 aa3.82□□□□□ -1.8
CTK2YJL006C TPK1P06244 397 aa3.82□□□□□ -1.8
CTK2YJL006C BAR1P12630 587 aa3.82□□□□□ -1.8
CTK2YJL006C YSP3P25036 478 aa3.82□□□□□ -1.8
CTK2YJL006C KRE9P39005 276 aa3.82□□□□□ -1.8
CTK2YJL006C ADE16P54113 591 aaKnown RBP3.82□□□□□ -1.8
CTK2YJL006C UTP21Q06078 939 aaPredicted RBP3.82□□□□□ -1.8
CTK2YJL006C PFK2P16862 959 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
CTK2YJL006C TRX2P22803 104 aaKnown RBP3.81□□□□□ -1.8
CTK2YJL006C RAD16P31244 790 aa3.81□□□□□ -1.8
CTK2YJL006C RPN2P32565 945 aaKnown RBP3.81□□□□□ -1.8
CTK2YJL006C BNA1P47096 177 aa3.81□□□□□ -1.8
CTK2YJL006C ASE1P50275 885 aa3.81□□□□□ -1.8
CTK2YJL006C COG1P53079 417 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms