RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W EPT1P22140 391 aa10.2□□□□□ -0.78
UBA4YHR111W SNT1P25357 1226 aa10.2□□□□□ -0.78
UBA4YHR111W TPS2P31688 896 aaKnown RBP10.2□□□□□ -0.78
UBA4YHR111W GND1P38720 489 aaKnown RBP10.2□□□□□ -0.78
UBA4YHR111W PXA1P41909 870 aa10.2□□□□□ -0.78
UBA4YHR111W YFL012WP43580 148 aa10.2□□□□□ -0.78
UBA4YHR111W MAL13P53338 473 aa10.2□□□□□ -0.78
UBA4YHR111W ADY3Q07732 790 aa10.2□□□□□ -0.78
UBA4YHR111W RIO1Q12196 484 aaKnown RBP10.2□□□□□ -0.78
UBA4YHR111W RMP1Q12530 201 aa10.2□□□□□ -0.78
UBA4YHR111W CMD1P06787 147 aaKnown RBP10.19□□□□□ -0.78
UBA4YHR111W SNF5P18480 905 aa10.19□□□□□ -0.78
UBA4YHR111W HSP60P19882 572 aaKnown RBP10.19□□□□□ -0.78
UBA4YHR111W URA7P28274 579 aaKnown RBP10.19□□□□□ -0.78
UBA4YHR111W MAK5P38112 773 aaPredicted RBP10.19□□□□□ -0.78
UBA4YHR111W MRP21P38175 177 aa10.19□□□□□ -0.78
UBA4YHR111W LDB7P38210 180 aa10.19□□□□□ -0.78
UBA4YHR111W IML3P38265 245 aa10.19□□□□□ -0.78
UBA4YHR111W SEO1P39709 593 aa10.19□□□□□ -0.78
UBA4YHR111W YIL108WP40483 696 aaKnown RBP10.19□□□□□ -0.78
UBA4YHR111W YNL320WP42840 284 aa10.19□□□□□ -0.78
UBA4YHR111W SUM1P46676 1062 aa10.19□□□□□ -0.78
UBA4YHR111W YGL108CP53139 140 aa10.19□□□□□ -0.78
UBA4YHR111W SUN4P53616 420 aa10.19□□□□□ -0.78
UBA4YHR111W COG6P53959 839 aa10.19□□□□□ -0.78
UBA4YHR111W TGL2P54857 326 aa10.19□□□□□ -0.78
UBA4YHR111W RPN9Q04062 393 aaKnown RBP10.19□□□□□ -0.78
UBA4YHR111W NHX1Q04121 633 aa10.19□□□□□ -0.78
UBA4YHR111W ARG7Q04728 441 aa10.19□□□□□ -0.78
UBA4YHR111W EAF1Q06337 982 aa10.19□□□□□ -0.78
UBA4YHR111W TFB4Q12004 338 aa10.19□□□□□ -0.78
UBA4YHR111W SMF3Q12078 473 aaPredicted RBP10.19□□□□□ -0.78
UBA4YHR111W ERG20P08524 352 aaKnown RBP10.18□□□□□ -0.78
UBA4YHR111W SBP1P10080 294 aaKnown RBP10.18□□□□□ -0.78
UBA4YHR111W PEP5P12868 1029 aa10.18□□□□□ -0.78
UBA4YHR111W GLN4P13188 809 aaKnown RBP10.18□□□□□ -0.78
UBA4YHR111W RFA2P26754 273 aaKnown RBP10.18□□□□□ -0.78
UBA4YHR111W URA10P30402 227 aa10.18□□□□□ -0.78
UBA4YHR111W MRPL9P31334 269 aa10.18□□□□□ -0.78
UBA4YHR111W PCL5P38794 229 aa10.18□□□□□ -0.78
UBA4YHR111W CYC2P38909 366 aa10.18□□□□□ -0.78
UBA4YHR111W LTP1P40347 161 aa10.18□□□□□ -0.78
UBA4YHR111W ALG8P40351 577 aa10.18□□□□□ -0.78
UBA4YHR111W IRR1P40541 1150 aa10.18□□□□□ -0.78
UBA4YHR111W PET117Q02771 107 aa10.18□□□□□ -0.78
UBA4YHR111W YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
UBA4YHR111W CUE5Q08412 411 aaKnown RBP10.18□□□□□ -0.78
UBA4YHR111W BUD7Q08754 746 aa10.18□□□□□ -0.78
UBA4YHR111W NOP14Q99207 810 aaKnown RBP10.18□□□□□ -0.78
UBA4YHR111W PET111P08468 800 aa10.17□□□□□ -0.78
UBA4YHR111W TUB1P09733 447 aaKnown RBP10.17□□□□□ -0.78
UBA4YHR111W OLA1P38219 394 aaKnown RBP10.17□□□□□ -0.78
UBA4YHR111W UBP14P38237 781 aaKnown RBP10.17□□□□□ -0.78
UBA4YHR111W DBP8P38719 431 aa10.17□□□□□ -0.78
UBA4YHR111W CCT6P39079 546 aa10.17□□□□□ -0.78
UBA4YHR111W INA22P40576 216 aa10.17□□□□□ -0.78
UBA4YHR111W GTS1P40956 396 aa10.17□□□□□ -0.78
UBA4YHR111W YFR018CP43599 363 aa10.17□□□□□ -0.78
UBA4YHR111W SAE2P46946 345 aa10.17□□□□□ -0.78
UBA4YHR111W EMI1Q04406 187 aa10.17□□□□□ -0.78
UBA4YHR111W TRM8Q12009 286 aa10.17□□□□□ -0.78
UBA4YHR111W VPS68Q12016 184 aa10.17□□□□□ -0.78
UBA4YHR111W YPR089WO13585 888 aa10.16□□□□□ -0.78
UBA4YHR111W TEF1P02994 458 aaKnown RBP10.16□□□□□ -0.78
UBA4YHR111W AMD1P15274 810 aaKnown RBP10.16□□□□□ -0.78
UBA4YHR111W STB6P36085 766 aa10.16□□□□□ -0.78
UBA4YHR111W MUM2P38236 366 aa10.16□□□□□ -0.78
UBA4YHR111W ACO2P39533 789 aa10.16□□□□□ -0.78
UBA4YHR111W MEF2P39677 819 aa10.16□□□□□ -0.78
UBA4YHR111W ERV46P39727 415 aa10.16□□□□□ -0.78
UBA4YHR111W IME4P41833 600 aa10.16□□□□□ -0.78
UBA4YHR111W CTK3P46963 296 aaPredicted RBP10.16□□□□□ -0.78
UBA4YHR111W PEX8P53248 589 aa10.16□□□□□ -0.78
UBA4YHR111W VPS60Q03390 229 aa10.16□□□□□ -0.78
UBA4YHR111W THI73Q07904 523 aa10.16□□□□□ -0.78
UBA4YHR111W HRK1Q08732 759 aaKnown RBP10.16□□□□□ -0.78
UBA4YHR111W RMD5Q12508 421 aa10.16□□□□□ -0.78
UBA4YHR111W TEL1P38110 2787 aa10.16□□□□□ -0.78
UBA4YHR111W CPA1P07258 411 aaKnown RBP10.15□□□□□ -0.78
UBA4YHR111W INO1P11986 533 aa10.15□□□□□ -0.78
UBA4YHR111W VAN1P23642 535 aa10.15□□□□□ -0.78
UBA4YHR111W BEM1P29366 551 aa10.15□□□□□ -0.78
UBA4YHR111W PRP18P33411 251 aaPredicted RBP10.15□□□□□ -0.78
UBA4YHR111W GMH1P36125 273 aa10.15□□□□□ -0.78
UBA4YHR111W CIS3P47001 227 aa10.15□□□□□ -0.78
UBA4YHR111W TFB2Q02939 513 aa10.15□□□□□ -0.78
UBA4YHR111W ARX1Q03862 593 aaKnown RBP10.15□□□□□ -0.78
UBA4YHR111W YMR027WQ04371 470 aa10.15□□□□□ -0.78
UBA4YHR111W YDR109CQ04585 715 aa10.15□□□□□ -0.78
UBA4YHR111W NUT2Q06213 157 aa10.15□□□□□ -0.78
UBA4YHR111W ATG23Q06671 453 aa10.15□□□□□ -0.78
UBA4YHR111W ATP12P22135 325 aa10.14□□□□□ -0.79
UBA4YHR111W PHO84P25297 587 aaKnown RBP10.14□□□□□ -0.79
UBA4YHR111W SPR1P32603 445 aa10.14□□□□□ -0.79
UBA4YHR111W YSW1P38280 609 aa10.14□□□□□ -0.79
UBA4YHR111W BIR1P47134 954 aa10.14□□□□□ -0.79
UBA4YHR111W YDR444WQ04093 687 aa10.14□□□□□ -0.79
UBA4YHR111W RRB1Q04225 511 aaKnown RBP10.14□□□□□ -0.79
UBA4YHR111W YML096WQ04489 525 aa10.14□□□□□ -0.79
UBA4YHR111W ADE13Q05911 482 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms