RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C CLP1Q08685 445 aaPredicted RBP4.3□□□□□ -1.72
RTA1YGR213C PRS5Q12265 496 aaKnown RBP4.3□□□□□ -1.72
RTA1YGR213C ENT1Q12518 454 aa4.3□□□□□ -1.72
RTA1YGR213C SWI1P09547 1314 aa4.29□□□□□ -1.72
RTA1YGR213C RPB4P20433 221 aaPredicted RBP4.29□□□□□ -1.72
RTA1YGR213C BUD14P27637 709 aa4.29□□□□□ -1.72
RTA1YGR213C RAD16P31244 790 aa4.29□□□□□ -1.72
RTA1YGR213C DBF20P32328 564 aa4.29□□□□□ -1.72
RTA1YGR213C NUF2P33895 451 aa4.29□□□□□ -1.72
RTA1YGR213C PTH2P34222 208 aa4.29□□□□□ -1.72
RTA1YGR213C RRP1P35178 278 aaPredicted RBP4.29□□□□□ -1.72
RTA1YGR213C TCD1P38756 429 aa4.29□□□□□ -1.72
RTA1YGR213C YIR014WP40570 242 aa4.29□□□□□ -1.72
RTA1YGR213C CIN1P40987 1014 aa4.29□□□□□ -1.72
RTA1YGR213C SNO3P43544 222 aa4.29□□□□□ -1.72
RTA1YGR213C IDP3P53982 420 aaKnown RBP4.29□□□□□ -1.72
RTA1YGR213C MDM1Q01846 1127 aa4.29□□□□□ -1.72
RTA1YGR213C CWC21Q03375 135 aaKnown RBP4.29□□□□□ -1.72
RTA1YGR213C YMR111CQ04461 462 aaPredicted RBP4.29□□□□□ -1.72
RTA1YGR213C BLS1Q06071 122 aa4.29□□□□□ -1.72
RTA1YGR213C ATG26Q06321 1198 aa4.29□□□□□ -1.72
RTA1YGR213C SNU66Q12420 587 aaPredicted RBP4.29□□□□□ -1.72
RTA1YGR213C SEC39Q12745 709 aa4.29□□□□□ -1.72
RTA1YGR213C COX1P00401 534 aa4.28□□□□□ -1.72
RTA1YGR213C MTF2P10849 440 aa4.28□□□□□ -1.72
RTA1YGR213C URE2P23202 354 aaKnown RBP4.28□□□□□ -1.72
RTA1YGR213C LAC1P28496 418 aa4.28□□□□□ -1.72
RTA1YGR213C GSH1P32477 678 aa4.28□□□□□ -1.72
RTA1YGR213C GCD7P32502 381 aaPredicted RBP4.28□□□□□ -1.72
RTA1YGR213C VPS24P36095 224 aaKnown RBP4.28□□□□□ -1.72
RTA1YGR213C TIF5P38431 405 aaKnown RBP4.28□□□□□ -1.72
RTA1YGR213C BFR1P38934 470 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
RTA1YGR213C PES4P39684 611 aa4.28□□□□□ -1.72
RTA1YGR213C RIO2P40160 425 aaKnown RBP4.28□□□□□ -1.72
RTA1YGR213C UBP7P40453 1071 aa4.28□□□□□ -1.72
RTA1YGR213C ERR3P42222 437 aa4.28□□□□□ -1.72
RTA1YGR213C SKP2P42843 763 aa4.28□□□□□ -1.72
RTA1YGR213C HOP2P53187 214 aa4.28□□□□□ -1.72
RTA1YGR213C RSC1P53236 928 aa4.28□□□□□ -1.72
RTA1YGR213C IST1P53843 298 aaPredicted RBP4.28□□□□□ -1.72
RTA1YGR213C PNG1Q02890 363 aa4.28□□□□□ -1.72
RTA1YGR213C VAM6Q07468 1049 aa4.28□□□□□ -1.72
RTA1YGR213C RAD9P14737 1309 aa4.27□□□□□ -1.73
RTA1YGR213C YPK9Q12697 1472 aa4.27□□□□□ -1.73
RTA1YGR213C CYB2P00175 591 aa4.27□□□□□ -1.73
RTA1YGR213C RPB2P08518 1224 aaKnown RBP4.27□□□□□ -1.73
RTA1YGR213C PTP1P25044 335 aa4.27□□□□□ -1.73
RTA1YGR213C PTC6P25646 442 aa4.27□□□□□ -1.73
RTA1YGR213C ANP1P32629 500 aa4.27□□□□□ -1.73
RTA1YGR213C GEX2P36173 615 aa4.27□□□□□ -1.73
RTA1YGR213C PSA1P41940 361 aaKnown RBP4.27□□□□□ -1.73
RTA1YGR213C IRC7P43623 340 aa4.27□□□□□ -1.73
RTA1YGR213C NET1P47035 1189 aa4.27□□□□□ -1.73
RTA1YGR213C ZAP1P47043 880 aa4.27□□□□□ -1.73
RTA1YGR213C LSC1P53598 329 aaKnown RBP4.27□□□□□ -1.73
RTA1YGR213C ERG13P54839 491 aaKnown RBP4.27□□□□□ -1.73
RTA1YGR213C MRPL13Q02204 264 aa4.27□□□□□ -1.73
RTA1YGR213C SNU56Q03782 492 aaKnown RBP4.27□□□□□ -1.73
RTA1YGR213C ATG16Q03818 150 aa4.27□□□□□ -1.73
RTA1YGR213C DBP9Q06218 594 aaKnown RBP4.27□□□□□ -1.73
RTA1YGR213C ATG23Q06671 453 aa4.27□□□□□ -1.73
RTA1YGR213C LEA1Q08963 238 aaPredicted RBP4.27□□□□□ -1.73
RTA1YGR213C YIL002W-AQ3E7Z5 69 aa4.27□□□□□ -1.73
RTA1YGR213C IRC20Q06554 1556 aa4.27□□□□□ -1.73
RTA1YGR213C MON2P48563 1636 aaPredicted RBP4.26□□□□□ -1.73
RTA1YGR213C ILV2P07342 687 aaKnown RBP4.26□□□□□ -1.73
RTA1YGR213C PET494P07390 489 aaPredicted RBP4.26□□□□□ -1.73
RTA1YGR213C NUC1P08466 329 aa4.26□□□□□ -1.73
RTA1YGR213C YML003WP0CF16 290 aa4.26□□□□□ -1.73
RTA1YGR213C MER1P16523 270 aa4.26□□□□□ -1.73
RTA1YGR213C PET123P17558 318 aa4.26□□□□□ -1.73
RTA1YGR213C UBC1P21734 215 aaKnown RBP4.26□□□□□ -1.73
RTA1YGR213C ACP1P32463 125 aa4.26□□□□□ -1.73
RTA1YGR213C RPN12P32496 274 aa4.26□□□□□ -1.73
RTA1YGR213C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
RTA1YGR213C MRPL40P36534 297 aa4.26□□□□□ -1.73
RTA1YGR213C SHC1P39000 512 aa4.26□□□□□ -1.73
RTA1YGR213C CIN4P39110 191 aa4.26□□□□□ -1.73
RTA1YGR213C ERV46P39727 415 aa4.26□□□□□ -1.73
RTA1YGR213C MEP1P40260 492 aa4.26□□□□□ -1.73
RTA1YGR213C PSF2P40359 213 aa4.26□□□□□ -1.73
RTA1YGR213C SAP185P40856 1058 aa4.26□□□□□ -1.73
RTA1YGR213C UBX6P47049 396 aa4.26□□□□□ -1.73
RTA1YGR213C MSY1P48527 492 aa4.26□□□□□ -1.73
RTA1YGR213C EFM5P53200 248 aaKnown RBP4.26□□□□□ -1.73
RTA1YGR213C SXM1Q04175 944 aaKnown RBP4.26□□□□□ -1.73
RTA1YGR213C VMS1Q04311 632 aaKnown RBP4.26□□□□□ -1.73
RTA1YGR213C NNT1Q05874 261 aa4.26□□□□□ -1.73
RTA1YGR213C TFC6Q06339 672 aa4.26□□□□□ -1.73
RTA1YGR213C TSR1Q07381 788 aaKnown RBP4.26□□□□□ -1.73
RTA1YGR213C RTP1Q12751 981 aa4.26□□□□□ -1.73
RTA1YGR213C TSC11P40061 1430 aa4.26□□□□□ -1.73
RTA1YGR213C YMR085WP0CF18 432 aa4.25□□□□□ -1.73
RTA1YGR213C RED1P14291 827 aa4.25□□□□□ -1.73
RTA1YGR213C SEN2P16658 377 aa4.25□□□□□ -1.73
RTA1YGR213C LRE1P25579 583 aaKnown RBP4.25□□□□□ -1.73
RTA1YGR213C KRR1P25586 316 aaPredicted RBP4.25□□□□□ -1.73
RTA1YGR213C MIC60P36112 540 aa4.25□□□□□ -1.73
RTA1YGR213C MRPL36P36531 177 aa4.25□□□□□ -1.73
RTA1YGR213C EFM2P38347 419 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms