RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeastyeast

Gene UPS3, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS3YDR185C ERG5P54781 538 aa5.65□□□□□ -1.5
UPS3YDR185C YDR341CQ05506 607 aaKnown RBP5.65□□□□□ -1.5
UPS3YDR185C IZH3Q07959 543 aa5.65□□□□□ -1.5
UPS3YDR185C BUD7Q08754 746 aa5.65□□□□□ -1.5
UPS3YDR185C SPE4Q12455 300 aa5.65□□□□□ -1.5
UPS3YDR185C YBR255C-AQ3E776 120 aa5.65□□□□□ -1.5
UPS3YDR185C CAF20P12962 161 aaKnown RBP5.64□□□□□ -1.51
UPS3YDR185C STE12P13574 688 aa5.64□□□□□ -1.51
UPS3YDR185C APE1P14904 514 aa5.64□□□□□ -1.51
UPS3YDR185C MDH1P17505 334 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
UPS3YDR185C YIH1P25637 258 aa5.64□□□□□ -1.51
UPS3YDR185C AGP2P38090 596 aa5.64□□□□□ -1.51
UPS3YDR185C CTP1P38152 299 aa5.64□□□□□ -1.51
UPS3YDR185C OTU2P38747 307 aaKnown RBP5.64□□□□□ -1.51
UPS3YDR185C SEC24P40482 926 aaKnown RBP5.64□□□□□ -1.51
UPS3YDR185C ZIM17P42844 174 aa5.64□□□□□ -1.51
UPS3YDR185C YGR079WP53249 370 aa5.64□□□□□ -1.51
UPS3YDR185C OAZ1Q02803 292 aa5.64□□□□□ -1.51
UPS3YDR185C EFR3Q03653 782 aaKnown RBP5.64□□□□□ -1.51
UPS3YDR185C DLT1Q04216 342 aa5.64□□□□□ -1.51
UPS3YDR185C BUD22Q04347 519 aaKnown RBP5.64□□□□□ -1.51
UPS3YDR185C YPL191CQ08930 360 aa5.64□□□□□ -1.51
UPS3YDR185C YPT6Q99260 215 aa5.64□□□□□ -1.51
UPS3YDR185C YML003WP0CF16 290 aa5.63□□□□□ -1.51
UPS3YDR185C YCR051WP25631 222 aa5.63□□□□□ -1.51
UPS3YDR185C YBR053CP38235 358 aa5.63□□□□□ -1.51
UPS3YDR185C HRB1P38922 454 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
UPS3YDR185C GIP4P39732 760 aa5.63□□□□□ -1.51
UPS3YDR185C MEP1P40260 492 aa5.63□□□□□ -1.51
UPS3YDR185C ELO3P40319 345 aa5.63□□□□□ -1.51
UPS3YDR185C THI6P41835 540 aa5.63□□□□□ -1.51
UPS3YDR185C PHO23P50947 330 aa5.63□□□□□ -1.51
UPS3YDR185C PAN2P53010 1115 aaPredicted RBP5.63□□□□□ -1.51
UPS3YDR185C YGL036WP53185 909 aaPredicted RBP5.63□□□□□ -1.51
UPS3YDR185C BNI5P53890 448 aaKnown RBP5.63□□□□□ -1.51
UPS3YDR185C USA1Q03714 838 aa5.63□□□□□ -1.51
UPS3YDR185C CUE5Q08412 411 aaKnown RBP5.63□□□□□ -1.51
UPS3YDR185C ATG29Q12092 213 aa5.63□□□□□ -1.51
UPS3YDR185C PRS5Q12265 496 aaKnown RBP5.63□□□□□ -1.51
UPS3YDR185C VMA2P16140 517 aaKnown RBP5.62□□□□□ -1.51
UPS3YDR185C PAP1P29468 568 aaKnown RBP5.62□□□□□ -1.51
UPS3YDR185C ELF1P36053 145 aa5.62□□□□□ -1.51
UPS3YDR185C ARO9P38840 513 aaPredicted RBP5.62□□□□□ -1.51
UPS3YDR185C REV7P38927 245 aa5.62□□□□□ -1.51
UPS3YDR185C CCT6P39079 546 aa5.62□□□□□ -1.51
UPS3YDR185C BUD27P43573 796 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
UPS3YDR185C SAE2P46946 345 aa5.62□□□□□ -1.51
UPS3YDR185C LYS4P49367 693 aaPredicted RBP5.62□□□□□ -1.51
UPS3YDR185C UBC11P52492 156 aa5.62□□□□□ -1.51
UPS3YDR185C VID30P53076 958 aa5.62□□□□□ -1.51
UPS3YDR185C STR3P53101 465 aaKnown RBP5.62□□□□□ -1.51
UPS3YDR185C IMO32P53219 342 aa5.62□□□□□ -1.51
UPS3YDR185C DAK1P54838 584 aaKnown RBP5.62□□□□□ -1.51
UPS3YDR185C MFM1Q02783 413 aa5.62□□□□□ -1.51
UPS3YDR185C YSH1Q06224 779 aaPredicted RBP5.62□□□□□ -1.51
UPS3YDR185C RKR1Q04781 1562 aa5.62□□□□□ -1.51
UPS3YDR185C STF1P01098 86 aa5.61□□□□□ -1.51
UPS3YDR185C TRX1P22217 103 aaKnown RBP5.61□□□□□ -1.51
UPS3YDR185C VMA16P23968 213 aa5.61□□□□□ -1.51
UPS3YDR185C HCM1P25364 564 aa5.61□□□□□ -1.51
UPS3YDR185C FUB1P25659 250 aa5.61□□□□□ -1.51
UPS3YDR185C RFA2P26754 273 aaKnown RBP5.61□□□□□ -1.51
UPS3YDR185C CST26P38226 397 aa5.61□□□□□ -1.51
UPS3YDR185C MAF1P41910 395 aa5.61□□□□□ -1.51
UPS3YDR185C FHN1P53279 174 aa5.61□□□□□ -1.51
UPS3YDR185C SPC98P53540 846 aa5.61□□□□□ -1.51
UPS3YDR185C PRP3Q03338 469 aaPredicted RBP5.61□□□□□ -1.51
UPS3YDR185C PRP42Q03776 544 aaKnown RBP5.61□□□□□ -1.51
UPS3YDR185C MRD1Q06106 887 aaKnown RBP5.61□□□□□ -1.51
UPS3YDR185C GPN2Q08726 347 aaPredicted RBP5.61□□□□□ -1.51
UPS3YDR185C NFI1Q12216 726 aa5.61□□□□□ -1.51
UPS3YDR185C NTO1Q12311 748 aa5.61□□□□□ -1.51
UPS3YDR185C YKL033W-AQ86ZR7 236 aa5.61□□□□□ -1.51
UPS3YDR185C AFI1Q99222 893 aa5.61□□□□□ -1.51
UPS3YDR185C ARD1P07347 238 aaPredicted RBP5.6□□□□□ -1.51
UPS3YDR185C ABF1P14164 731 aa5.6□□□□□ -1.51
UPS3YDR185C RRP7P25368 297 aaPredicted RBP5.6□□□□□ -1.51
UPS3YDR185C MGM1P32266 881 aa5.6□□□□□ -1.51
UPS3YDR185C PDB1P32473 366 aaKnown RBP5.6□□□□□ -1.51
UPS3YDR185C HIS7P33734 552 aaKnown RBP5.6□□□□□ -1.51
UPS3YDR185C PHO11P35842 467 aa5.6□□□□□ -1.51
UPS3YDR185C PHO12P38693 467 aa5.6□□□□□ -1.51
UPS3YDR185C FUN12P39730 1002 aaKnown RBP5.6□□□□□ -1.51
UPS3YDR185C SGN1P40561 250 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
UPS3YDR185C CTK2P46962 323 aa5.6□□□□□ -1.51
UPS3YDR185C CTR1P49573 406 aa5.6□□□□□ -1.51
UPS3YDR185C OCA1P50946 238 aaPredicted RBP5.6□□□□□ -1.51
UPS3YDR185C HOS2P53096 452 aaPredicted RBP5.6□□□□□ -1.51
UPS3YDR185C YAT1P80235 687 aa5.6□□□□□ -1.51
UPS3YDR185C INA17Q02888 182 aa5.6□□□□□ -1.51
UPS3YDR185C YDR239CQ03780 787 aa5.6□□□□□ -1.51
UPS3YDR185C RSF1Q05043 376 aa5.6□□□□□ -1.51
UPS3YDR185C VPS38Q05919 439 aa5.6□□□□□ -1.51
UPS3YDR185C CRN1Q06440 651 aa5.6□□□□□ -1.51
UPS3YDR185C FMP45Q07651 309 aa5.6□□□□□ -1.51
UPS3YDR185C IRC13Q08630 104 aa5.6□□□□□ -1.51
UPS3YDR185C YPL216WQ08964 1102 aa5.6□□□□□ -1.51
UPS3YDR185C URA7P28274 579 aaKnown RBP5.59□□□□□ -1.51
UPS3YDR185C CDC5P32562 705 aa5.59□□□□□ -1.51
UPS3YDR185C SIP1P32578 815 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms