RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeastyeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP15YDR100W SKM1Q12469 655 aa3.68□□□□□ -1.82
TVP15YDR100W MRP2P10663 115 aaPredicted RBP3.67□□□□□ -1.82
TVP15YDR100W YCR006CP25350 157 aa3.67□□□□□ -1.82
TVP15YDR100W SOF1P33750 489 aaKnown RBP3.67□□□□□ -1.82
TVP15YDR100W AAP1P37898 856 aaKnown RBP3.67□□□□□ -1.82
TVP15YDR100W SEC31P38968 1273 aaKnown RBP3.67□□□□□ -1.82
TVP15YDR100W MRX1P40050 688 aa3.67□□□□□ -1.82
TVP15YDR100W XBP1P40489 647 aa3.67□□□□□ -1.82
TVP15YDR100W LYS14P40971 790 aa3.67□□□□□ -1.82
TVP15YDR100W CDC1P40986 491 aa3.67□□□□□ -1.82
TVP15YDR100W SIP4P46954 829 aa3.67□□□□□ -1.82
TVP15YDR100W IDP3P53982 420 aaKnown RBP3.67□□□□□ -1.82
TVP15YDR100W ERG13P54839 491 aaKnown RBP3.67□□□□□ -1.82
TVP15YDR100W MUB1Q03162 620 aa3.67□□□□□ -1.82
TVP15YDR100W RSM28Q03430 361 aa3.67□□□□□ -1.82
TVP15YDR100W PDR8Q06149 701 aa3.67□□□□□ -1.82
TVP15YDR100W VIP1Q06685 1146 aaKnown RBP3.67□□□□□ -1.82
TVP15YDR100W ENT4Q07872 247 aa3.67□□□□□ -1.82
TVP15YDR100W PFA4Q12006 378 aa3.67□□□□□ -1.82
TVP15YDR100W ENT1Q12518 454 aa3.67□□□□□ -1.82
TVP15YDR100W YBR085C-AO43137 85 aa3.66□□□□□ -1.82
TVP15YDR100W PET111P08468 800 aa3.66□□□□□ -1.82
TVP15YDR100W COQ3P27680 312 aa3.66□□□□□ -1.82
TVP15YDR100W SLZ1P40167 298 aa3.66□□□□□ -1.82
TVP15YDR100W TMA108P40462 946 aa3.66□□□□□ -1.82
TVP15YDR100W SEC24P40482 926 aaKnown RBP3.66□□□□□ -1.82
TVP15YDR100W PIL1P53252 339 aaKnown RBP3.66□□□□□ -1.82
TVP15YDR100W INN1P53901 409 aa3.66□□□□□ -1.82
TVP15YDR100W GPN2Q08726 347 aaPredicted RBP3.66□□□□□ -1.82
TVP15YDR100W YER145C-AA0A023PYF4 145 aa3.65□□□□□ -1.83
TVP15YDR100W CDC16P09798 840 aa3.65□□□□□ -1.83
TVP15YDR100W CDC24P11433 854 aaPredicted RBP3.65□□□□□ -1.83
TVP15YDR100W SAN1P22470 610 aa3.65□□□□□ -1.83
TVP15YDR100W ARN1P38731 627 aa3.65□□□□□ -1.83
TVP15YDR100W ECM10P39987 644 aa3.65□□□□□ -1.83
TVP15YDR100W ULP2P40537 1034 aaPredicted RBP3.65□□□□□ -1.83
TVP15YDR100W YJL107CP42947 387 aa3.65□□□□□ -1.83
TVP15YDR100W ARC1P46672 376 aaKnown RBP3.65□□□□□ -1.83
TVP15YDR100W AAD10P47182 288 aa3.65□□□□□ -1.83
TVP15YDR100W VPS72Q03388 795 aa3.65□□□□□ -1.83
TVP15YDR100W RAD30Q04049 632 aa3.65□□□□□ -1.83
TVP15YDR100W SKG3Q06315 1026 aa3.65□□□□□ -1.83
TVP15YDR100W YLR049CQ12110 428 aa3.65□□□□□ -1.83
TVP15YDR100W GET3Q12154 354 aaKnown RBP3.65□□□□□ -1.83
TVP15YDR100W YOR111WQ99210 232 aa3.65□□□□□ -1.83
TVP15YDR100W GAL4P04386 881 aa3.64□□□□□ -1.83
TVP15YDR100W PRE8P23639 250 aa3.64□□□□□ -1.83
TVP15YDR100W PAH1P32567 862 aa3.64□□□□□ -1.83
TVP15YDR100W OCT1P35999 772 aa3.64□□□□□ -1.83
TVP15YDR100W ESL2P36168 1195 aa3.64□□□□□ -1.83
TVP15YDR100W NAB3P38996 802 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
TVP15YDR100W JHD1P40034 492 aa3.64□□□□□ -1.83
TVP15YDR100W YGL036WP53185 909 aaPredicted RBP3.64□□□□□ -1.83
TVP15YDR100W YSA1Q01976 231 aa3.64□□□□□ -1.83
TVP15YDR100W PFA5Q03289 374 aa3.64□□□□□ -1.83
TVP15YDR100W TMA64Q04600 565 aaKnown RBP3.64□□□□□ -1.83
TVP15YDR100W YLR455WQ06188 304 aa3.64□□□□□ -1.83
TVP15YDR100W RIX7Q07844 837 aaKnown RBP3.64□□□□□ -1.83
TVP15YDR100W MCH4Q08268 501 aa3.64□□□□□ -1.83
TVP15YDR100W CRC1Q12289 327 aa3.64□□□□□ -1.83
TVP15YDR100W CHO1P08456 276 aa3.63□□□□□ -1.83
TVP15YDR100W GPA1P08539 472 aa3.63□□□□□ -1.83
TVP15YDR100W AAC3P18238 307 aa3.63□□□□□ -1.83
TVP15YDR100W YAP1P19880 650 aaKnown RBP3.63□□□□□ -1.83
TVP15YDR100W PTP1P25044 335 aa3.63□□□□□ -1.83
TVP15YDR100W RTS1P38903 757 aa3.63□□□□□ -1.83
TVP15YDR100W LTP1P40347 161 aa3.63□□□□□ -1.83
TVP15YDR100W YIL024CP40543 189 aa3.63□□□□□ -1.83
TVP15YDR100W PSA1P41940 361 aaKnown RBP3.63□□□□□ -1.83
TVP15YDR100W YFR020WP43600 232 aa3.63□□□□□ -1.83
TVP15YDR100W CTK2P46962 323 aa3.63□□□□□ -1.83
TVP15YDR100W COP1P53622 1201 aaKnown RBP3.63□□□□□ -1.83
TVP15YDR100W HXK2P04807 486 aaKnown RBP3.62□□□□□ -1.83
TVP15YDR100W RPL19AP0CX82 189 aaKnown RBP3.62□□□□□ -1.83
TVP15YDR100W RPL19BP0CX83 189 aaPredicted RBP3.62□□□□□ -1.83
TVP15YDR100W PXL1P36166 706 aa3.62□□□□□ -1.83
TVP15YDR100W FLO5P38894 1075 aa3.62□□□□□ -1.83
TVP15YDR100W NOP16P40007 231 aaKnown RBP3.62□□□□□ -1.83
TVP15YDR100W TPA1P40032 644 aaKnown RBP3.62□□□□□ -1.83
TVP15YDR100W BUR6P40096 142 aa3.62□□□□□ -1.83
TVP15YDR100W BNA3P47039 444 aaKnown RBP3.62□□□□□ -1.83
TVP15YDR100W UPF3P48412 387 aaKnown RBP3.62□□□□□ -1.83
TVP15YDR100W IST1P53843 298 aaPredicted RBP3.62□□□□□ -1.83
TVP15YDR100W ECM22Q05958 814 aaPredicted RBP3.62□□□□□ -1.83
TVP15YDR100W PIG1Q06216 648 aa3.62□□□□□ -1.83
TVP15YDR100W FRE3Q08905 711 aa3.62□□□□□ -1.83
TVP15YDR100W TCO89Q08921 799 aa3.62□□□□□ -1.83
TVP15YDR100W HUA2Q12134 243 aa3.62□□□□□ -1.83
TVP15YDR100W RRI1Q12468 440 aa3.62□□□□□ -1.83
TVP15YDR100W YBR126W-AQ8TGU7 68 aa3.62□□□□□ -1.83
TVP15YDR100W TKL1P23254 680 aaKnown RBP3.61□□□□□ -1.83
TVP15YDR100W CNA1P23287 553 aa3.61□□□□□ -1.83
TVP15YDR100W YCK1P23291 538 aa3.61□□□□□ -1.83
TVP15YDR100W MAL33P38157 468 aa3.61□□□□□ -1.83
TVP15YDR100W YBL029WP38201 376 aa3.61□□□□□ -1.83
TVP15YDR100W RPN11P43588 306 aaKnown RBP3.61□□□□□ -1.83
TVP15YDR100W NET1P47035 1189 aa3.61□□□□□ -1.83
TVP15YDR100W UBP8P50102 471 aa3.61□□□□□ -1.83
TVP15YDR100W DUO1P53168 247 aaKnown RBP3.61□□□□□ -1.83
TVP15YDR100W YNL144CP53907 740 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms