RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C AXL1P40851 1208 aa1.87□□□□□ -2.11
MSH6YDR097C ZIM17P42844 174 aa1.87□□□□□ -2.11
MSH6YDR097C IDS2P46958 469 aa1.87□□□□□ -2.11
MSH6YDR097C UTP21Q06078 939 aaPredicted RBP1.87□□□□□ -2.11
MSH6YDR097C TPO1Q07824 586 aa1.87□□□□□ -2.11
MSH6YDR097C FRE5Q08908 694 aa1.87□□□□□ -2.11
MSH6YDR097C AIM41Q12032 185 aa1.87□□□□□ -2.11
MSH6YDR097C MHP1P43638 1398 aa1.87□□□□□ -2.11
MSH6YDR097C ATP2P00830 511 aaKnown RBP1.87□□□□□ -2.11
MSH6YDR097C ERG6P25087 383 aaKnown RBP1.87□□□□□ -2.11
MSH6YDR097C RPC53P25441 422 aa1.87□□□□□ -2.11
MSH6YDR097C LRE1P25579 583 aaKnown RBP1.87□□□□□ -2.11
MSH6YDR097C MVD1P32377 396 aaKnown RBP1.87□□□□□ -2.11
MSH6YDR097C TFB1P32776 642 aa1.87□□□□□ -2.11
MSH6YDR097C STB6P36085 766 aa1.87□□□□□ -2.11
MSH6YDR097C UBP13P38187 747 aa1.87□□□□□ -2.11
MSH6YDR097C SDH8P38345 138 aa1.87□□□□□ -2.11
MSH6YDR097C RRF1P38771 230 aa1.87□□□□□ -2.11
MSH6YDR097C MEF2P39677 819 aa1.87□□□□□ -2.11
MSH6YDR097C UBC11P52492 156 aa1.87□□□□□ -2.11
MSH6YDR097C OGG1P53397 376 aaPredicted RBP1.87□□□□□ -2.11
MSH6YDR097C YDR239CQ03780 787 aa1.87□□□□□ -2.11
MSH6YDR097C VBA4Q04602 768 aaKnown RBP1.87□□□□□ -2.11
MSH6YDR097C TDA6Q06466 467 aa1.87□□□□□ -2.11
MSH6YDR097C TMA16Q08687 178 aa1.87□□□□□ -2.11
MSH6YDR097C GAL10P04397 699 aa1.87□□□□□ -2.11
MSH6YDR097C SGF29P25554 259 aa1.87□□□□□ -2.11
MSH6YDR097C YCR015CP25616 317 aa1.87□□□□□ -2.11
MSH6YDR097C YKL050CP35736 922 aa1.87□□□□□ -2.11
MSH6YDR097C PSD1P39006 500 aa1.87□□□□□ -2.11
MSH6YDR097C AMA1P50082 593 aa1.87□□□□□ -2.11
MSH6YDR097C TEL2P53038 688 aa1.87□□□□□ -2.11
MSH6YDR097C YGR130CP53278 816 aa1.87□□□□□ -2.11
MSH6YDR097C ATG4P53867 494 aa1.87□□□□□ -2.11
MSH6YDR097C YPL034WQ03083 165 aa1.87□□□□□ -2.11
MSH6YDR097C CIR2Q08822 631 aa1.87□□□□□ -2.11
MSH6YDR097C BAG7Q12128 409 aa1.87□□□□□ -2.11
MSH6YDR097C GET3Q12154 354 aaKnown RBP1.87□□□□□ -2.11
MSH6YDR097C CHO2P05374 869 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C ERG20P08524 352 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C MAK32P23060 363 aa1.86□□□□□ -2.11
MSH6YDR097C KAR4P25583 335 aa1.86□□□□□ -2.11
MSH6YDR097C KRR1P25586 316 aaPredicted RBP1.86□□□□□ -2.11
MSH6YDR097C PDB1P32473 366 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C SMI1P32566 505 aa1.86□□□□□ -2.11
MSH6YDR097C TAH11P47112 604 aa1.86□□□□□ -2.11
MSH6YDR097C RPS7BP48164 190 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C MSY1P48527 492 aa1.86□□□□□ -2.11
MSH6YDR097C YGR035CP53222 116 aa1.86□□□□□ -2.11
MSH6YDR097C VPS75P53853 264 aa1.86□□□□□ -2.11
MSH6YDR097C SLG1P54867 378 aa1.86□□□□□ -2.11
MSH6YDR097C GCN5Q03330 439 aa1.86□□□□□ -2.11
MSH6YDR097C VPS64Q03944 604 aa1.86□□□□□ -2.11
MSH6YDR097C TAF3Q12297 353 aa1.86□□□□□ -2.11
MSH6YDR097C FRE6Q12473 712 aa1.86□□□□□ -2.11
MSH6YDR097C YOR019WQ99248 730 aa1.86□□□□□ -2.11
MSH6YDR097C PRP22P24384 1145 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C PUP2P32379 260 aa1.86□□□□□ -2.11
MSH6YDR097C DEF1P35732 738 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C TAT1P38085 619 aa1.86□□□□□ -2.11
MSH6YDR097C APE4P38821 490 aa1.86□□□□□ -2.11
MSH6YDR097C NUP60P39705 539 aa1.86□□□□□ -2.11
MSH6YDR097C GDI1P39958 451 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C RGI2P40188 164 aa1.86□□□□□ -2.11
MSH6YDR097C YMR147WP40218 223 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C EFM4P40516 257 aa1.86□□□□□ -2.11
MSH6YDR097C TDA10P42938 290 aa1.86□□□□□ -2.11
MSH6YDR097C RFX1P48743 811 aa1.86□□□□□ -2.11
MSH6YDR097C TAM41P53230 385 aa1.86□□□□□ -2.11
MSH6YDR097C HOT1Q03213 719 aa1.86□□□□□ -2.11
MSH6YDR097C VTI1Q04338 217 aa1.86□□□□□ -2.11
MSH6YDR097C CRF1Q04930 467 aa1.86□□□□□ -2.11
MSH6YDR097C RQC1Q05468 723 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C YFT2Q06676 274 aa1.86□□□□□ -2.11
MSH6YDR097C NCE102Q12207 173 aaRIP-Chip data1.86□□□□□ -2.11not detected
MSH6YDR097C PRE2P30656 287 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C SPC110P32380 944 aa1.86□□□□□ -2.11
MSH6YDR097C CDC5P32562 705 aa1.86□□□□□ -2.11
MSH6YDR097C YKR073CP36153 106 aa1.86□□□□□ -2.11
MSH6YDR097C AAP1P37898 856 aaKnown RBP1.86□□□□□ -2.11
MSH6YDR097C ICP55P40051 511 aa1.86□□□□□ -2.11
MSH6YDR097C MEP1P40260 492 aa1.86□□□□□ -2.11
MSH6YDR097C NAS2P40555 220 aa1.86□□□□□ -2.11
MSH6YDR097C SGN1P40561 250 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
MSH6YDR097C CDC1P40986 491 aa1.86□□□□□ -2.11
MSH6YDR097C NRG1Q03125 231 aa1.86□□□□□ -2.11
MSH6YDR097C NGL3Q03210 505 aa1.86□□□□□ -2.11
MSH6YDR097C PPN1Q04119 674 aa1.86□□□□□ -2.11
MSH6YDR097C PEX19Q07418 342 aa1.86□□□□□ -2.11
MSH6YDR097C MCA1Q08601 432 aa1.86□□□□□ -2.11
MSH6YDR097C TGL5Q12043 749 aa1.86□□□□□ -2.11
MSH6YDR097C YCK1P23291 538 aa1.85□□□□□ -2.11
MSH6YDR097C LCB1P25045 558 aaKnown RBP1.85□□□□□ -2.11
MSH6YDR097C ADH7P25377 361 aa1.85□□□□□ -2.11
MSH6YDR097C ALY1P36117 915 aa1.85□□□□□ -2.11
MSH6YDR097C LEU5P38702 357 aa1.85□□□□□ -2.11
MSH6YDR097C FMO1P38866 432 aa1.85□□□□□ -2.11
MSH6YDR097C HRB1P38922 454 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
MSH6YDR097C FMP52P40008 231 aa1.85□□□□□ -2.11
MSH6YDR097C ARB1P40024 610 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms