RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C HOL1P53389 586 aa6.3□□□□□ -1.4
CDC34YDR054C YNR040WP53736 256 aa6.3□□□□□ -1.4
CDC34YDR054C TEP1P53916 434 aa6.3□□□□□ -1.4
CDC34YDR054C YHM2Q04013 314 aa6.3□□□□□ -1.4
CDC34YDR054C TAF9Q05027 157 aa6.3□□□□□ -1.4
CDC34YDR054C YDR338CQ05497 695 aa6.3□□□□□ -1.4
CDC34YDR054C THI20Q08224 551 aa6.3□□□□□ -1.4
CDC34YDR054C NBP2Q12163 236 aa6.3□□□□□ -1.4
CDC34YDR054C RIO1Q12196 484 aaKnown RBP6.3□□□□□ -1.4
CDC34YDR054C APM4Q99186 491 aa6.3□□□□□ -1.4
CDC34YDR054C NHA1Q99271 985 aa6.3□□□□□ -1.4
CDC34YDR054C VPS13Q07878 3144 aa6.3□□□□□ -1.4
CDC34YDR054C MOT1P32333 1867 aa6.3□□□□□ -1.4
CDC34YDR054C IDI1P15496 288 aa6.29□□□□□ -1.4
CDC34YDR054C SLY1P22213 666 aa6.29□□□□□ -1.4
CDC34YDR054C UBC6P33296 250 aaPredicted RBP6.29□□□□□ -1.4
CDC34YDR054C WHI3P34761 661 aaKnown RBP6.29□□□□□ -1.4
CDC34YDR054C SPP381P38282 291 aaPredicted RBP6.29□□□□□ -1.4
CDC34YDR054C UBS1P38290 277 aa6.29□□□□□ -1.4
CDC34YDR054C LYS9P38999 446 aa6.29□□□□□ -1.4
CDC34YDR054C JHD1P40034 492 aa6.29□□□□□ -1.4
CDC34YDR054C ARG2P40360 574 aa6.29□□□□□ -1.4
CDC34YDR054C YJR124CP47159 448 aa6.29□□□□□ -1.4
CDC34YDR054C ASK10P48361 1146 aa6.29□□□□□ -1.4
CDC34YDR054C RNR4P49723 345 aaKnown RBP6.29□□□□□ -1.4
CDC34YDR054C YGR016WP53209 190 aa6.29□□□□□ -1.4
CDC34YDR054C RBG2P53295 368 aaKnown RBP6.29□□□□□ -1.4
CDC34YDR054C YNL144CP53907 740 aa6.29□□□□□ -1.4
CDC34YDR054C GSF2Q04697 403 aaKnown RBP6.29□□□□□ -1.4
CDC34YDR054C CIA1Q05583 330 aa6.29□□□□□ -1.4
CDC34YDR054C HRD3Q05787 833 aa6.29□□□□□ -1.4
CDC34YDR054C THI7Q05998 598 aa6.29□□□□□ -1.4
CDC34YDR054C SFH1Q06168 426 aa6.29□□□□□ -1.4
CDC34YDR054C NBA1Q08229 501 aaKnown RBP6.29□□□□□ -1.4
CDC34YDR054C LEA1Q08963 238 aaPredicted RBP6.29□□□□□ -1.4
CDC34YDR054C TAF10Q12030 206 aa6.29□□□□□ -1.4
CDC34YDR054C TY1A-DR3Q12441 440 aa6.29□□□□□ -1.4
CDC34YDR054C KCS1Q12494 1050 aa6.29□□□□□ -1.4
CDC34YDR054C ARG4P04076 463 aaPredicted RBP6.28□□□□□ -1.4
CDC34YDR054C PAB1P04147 577 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
CDC34YDR054C CBF1P17106 351 aa6.28□□□□□ -1.4
CDC34YDR054C BRF1P29056 596 aa6.28□□□□□ -1.4
CDC34YDR054C CDC12P32468 407 aaKnown RBP6.28□□□□□ -1.4
CDC34YDR054C SLC1P33333 303 aa6.28□□□□□ -1.4
CDC34YDR054C DUG2P38149 878 aa6.28□□□□□ -1.4
CDC34YDR054C YBR053CP38235 358 aa6.28□□□□□ -1.4
CDC34YDR054C YIR016WP40572 265 aa6.28□□□□□ -1.4
CDC34YDR054C SMK1P41808 388 aa6.28□□□□□ -1.4
CDC34YDR054C MAF1P41910 395 aa6.28□□□□□ -1.4
CDC34YDR054C ADA2Q02336 434 aa6.28□□□□□ -1.4
CDC34YDR054C THI21Q08975 551 aa6.28□□□□□ -1.4
CDC34YDR054C HSH49Q99181 213 aaPredicted RBP6.28□□□□□ -1.4
CDC34YDR054C IZH4Q99393 312 aa6.28□□□□□ -1.4
CDC34YDR054C RIF1P29539 1916 aa6.28□□□□□ -1.4
CDC34YDR054C YML002WP0CF17 737 aa6.27□□□□□ -1.41
CDC34YDR054C MAS1P10507 462 aa6.27□□□□□ -1.41
CDC34YDR054C PYC1P11154 1178 aaKnown RBP6.27□□□□□ -1.41
CDC34YDR054C MGT1P26188 188 aa6.27□□□□□ -1.41
CDC34YDR054C NGG1P32494 702 aa6.27□□□□□ -1.41
CDC34YDR054C AIM26P32858 118 aa6.27□□□□□ -1.41
CDC34YDR054C MUD2P36084 527 aaKnown RBP6.27□□□□□ -1.41
CDC34YDR054C FHL1P39521 936 aa6.27□□□□□ -1.41
CDC34YDR054C NOP16P40007 231 aaKnown RBP6.27□□□□□ -1.41
CDC34YDR054C FMP10P40098 244 aa6.27□□□□□ -1.41
CDC34YDR054C LSB6P42951 607 aa6.27□□□□□ -1.41
CDC34YDR054C RRT5P43607 289 aa6.27□□□□□ -1.41
CDC34YDR054C VTC4P47075 721 aa6.27□□□□□ -1.41
CDC34YDR054C KTR6P54070 446 aa6.27□□□□□ -1.41
CDC34YDR054C CEG1Q01159 459 aaPredicted RBP6.27□□□□□ -1.41
CDC34YDR054C HER2Q03557 464 aa6.27□□□□□ -1.41
CDC34YDR054C NSE5Q03718 556 aa6.27□□□□□ -1.41
CDC34YDR054C SPG3Q04398 127 aaPredicted RBP6.27□□□□□ -1.41
CDC34YDR054C MRI1Q06489 411 aaKnown RBP6.27□□□□□ -1.41
CDC34YDR054C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
CDC34YDR054C ENV7Q12003 364 aa6.27□□□□□ -1.41
CDC34YDR054C RRD2Q12461 358 aa6.27□□□□□ -1.41
CDC34YDR054C RPP1AP05318 106 aaPredicted RBP6.26□□□□□ -1.41
CDC34YDR054C ATP1P07251 545 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C RPS21AP0C0V8 87 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C CDC24P11433 854 aaPredicted RBP6.26□□□□□ -1.41
CDC34YDR054C YPK1P12688 680 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C PEP5P12868 1029 aa6.26□□□□□ -1.41
CDC34YDR054C SPO16P17122 198 aa6.26□□□□□ -1.41
CDC34YDR054C AAC3P18238 307 aa6.26□□□□□ -1.41
CDC34YDR054C KGD2P19262 463 aaPredicted RBP6.26□□□□□ -1.41
CDC34YDR054C CMK1P27466 446 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C CCR4P31384 837 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C TPS2P31688 896 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C DSS4P32601 143 aa6.26□□□□□ -1.41
CDC34YDR054C AFR1P33304 620 aa6.26□□□□□ -1.41
CDC34YDR054C POP4P38336 279 aa6.26□□□□□ -1.41
CDC34YDR054C SRP72P38688 640 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C CCT2P39076 527 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C INA22P40576 216 aa6.26□□□□□ -1.41
CDC34YDR054C YJR039WP47107 1121 aa6.26□□□□□ -1.41
CDC34YDR054C GPI8P49018 411 aa6.26□□□□□ -1.41
CDC34YDR054C ATP22P50273 684 aaPredicted RBP6.26□□□□□ -1.41
CDC34YDR054C PCL10P53124 433 aa6.26□□□□□ -1.41
CDC34YDR054C YNL247WP53852 767 aaKnown RBP6.26□□□□□ -1.41
CDC34YDR054C RPL22BP56628 122 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms