RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C PGS1P25578 521 aa1.09□□□□□ -2.23
VAM6YDL077C PTC6P25646 442 aa1.09□□□□□ -2.23
VAM6YDL077C THI4P32318 326 aa1.09□□□□□ -2.23
VAM6YDL077C BIO2P32451 375 aa1.09□□□□□ -2.23
VAM6YDL077C HIR1P32479 840 aa1.09□□□□□ -2.23
VAM6YDL077C SRP40P32583 406 aaPredicted RBP1.09□□□□□ -2.23
VAM6YDL077C PPG1P32838 368 aa1.09□□□□□ -2.23
VAM6YDL077C PEP12P32854 288 aa1.09□□□□□ -2.23
VAM6YDL077C MRS6P32864 603 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C MRP4P32902 394 aa1.09□□□□□ -2.23
VAM6YDL077C GDH2P33327 1092 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C UBP11P36026 717 aa1.09□□□□□ -2.23
VAM6YDL077C YKR078WP36158 585 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C TYS1P36421 394 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C MRPL17P36528 281 aa1.09□□□□□ -2.23
VAM6YDL077C ECM21P38167 1117 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C AVT5P38176 459 aa1.09□□□□□ -2.23
VAM6YDL077C RRT2P38332 387 aa1.09□□□□□ -2.23
VAM6YDL077C SBE22P38814 852 aa1.09□□□□□ -2.23
VAM6YDL077C GPB2P39717 880 aa1.09□□□□□ -2.23
VAM6YDL077C RMD6P39975 231 aa1.09□□□□□ -2.23
VAM6YDL077C THO1P40040 218 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C VFA1P40080 203 aa1.09□□□□□ -2.23
VAM6YDL077C DDI1P40087 428 aa1.09□□□□□ -2.23
VAM6YDL077C MEP1P40260 492 aa1.09□□□□□ -2.23
VAM6YDL077C INP51P40559 946 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C THI6P41835 540 aa1.09□□□□□ -2.23
VAM6YDL077C ZIM17P42844 174 aa1.09□□□□□ -2.23
VAM6YDL077C LOC1P43586 204 aaPredicted RBP1.09□□□□□ -2.23
VAM6YDL077C FAR7P43592 221 aa1.09□□□□□ -2.23
VAM6YDL077C ARC1P46672 376 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C RPC17P47076 161 aa1.09□□□□□ -2.23
VAM6YDL077C LIA1P47120 325 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C GNP1P48813 663 aa1.09□□□□□ -2.23
VAM6YDL077C PRP24P49960 444 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C YGR021WP53212 290 aa1.09□□□□□ -2.23
VAM6YDL077C GTF1P53260 183 aaPredicted RBP1.09□□□□□ -2.23
VAM6YDL077C TOF2Q02208 771 aa1.09□□□□□ -2.23
VAM6YDL077C MEC3Q02574 474 aa1.09□□□□□ -2.23
VAM6YDL077C MRPS16Q02608 121 aa1.09□□□□□ -2.23
VAM6YDL077C SLU7Q02775 382 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C SRT1Q03175 343 aa1.09□□□□□ -2.23
VAM6YDL077C YDR249CQ03787 373 aa1.09□□□□□ -2.23
VAM6YDL077C APC4Q04601 652 aa1.09□□□□□ -2.23
VAM6YDL077C JIP5Q06214 492 aaPredicted RBP1.09□□□□□ -2.23
VAM6YDL077C YDR306CQ06640 478 aa1.09□□□□□ -2.23
VAM6YDL077C GIC2Q06648 383 aa1.09□□□□□ -2.23
VAM6YDL077C UBX5Q06682 500 aa1.09□□□□□ -2.23
VAM6YDL077C YOL057WQ08225 711 aa1.09□□□□□ -2.23
VAM6YDL077C IMA2Q08295 589 aa1.09□□□□□ -2.23
VAM6YDL077C YOR296WQ08748 1289 aa1.09□□□□□ -2.23
VAM6YDL077C SOG2Q08817 791 aa1.09□□□□□ -2.23
VAM6YDL077C APL4Q12028 832 aa1.09□□□□□ -2.23
VAM6YDL077C RIM20Q12033 661 aa1.09□□□□□ -2.23
VAM6YDL077C PUS9Q12069 462 aa1.09□□□□□ -2.23
VAM6YDL077C SPE3Q12074 293 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C MED2Q12124 431 aa1.09□□□□□ -2.23
VAM6YDL077C YLR125WQ12138 136 aa1.09□□□□□ -2.23
VAM6YDL077C YPL066WQ12194 479 aa1.09□□□□□ -2.23
VAM6YDL077C OSW2Q12202 724 aa1.09□□□□□ -2.23
VAM6YDL077C RUP1Q12242 671 aa1.09□□□□□ -2.23
VAM6YDL077C NCB2Q92317 146 aa1.09□□□□□ -2.23
VAM6YDL077C RPL24AP04449 155 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C ILV2P07342 687 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C LPD1P09624 499 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C DSF1P0CX08 502 aa1.09□□□□□ -2.24
VAM6YDL077C YNR073CP0CX09 502 aa1.09□□□□□ -2.24
VAM6YDL077C MRP13P12686 339 aa1.09□□□□□ -2.24
VAM6YDL077C TOP3P13099 656 aa1.09□□□□□ -2.24
VAM6YDL077C KIN2P13186 1147 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C GLN4P13188 809 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C PRP9P19736 530 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C HSP60P19882 572 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C REC107P21651 314 aa1.09□□□□□ -2.24
VAM6YDL077C MRPL25P23369 157 aa1.09□□□□□ -2.24
VAM6YDL077C VAN1P23642 535 aa1.09□□□□□ -2.24
VAM6YDL077C PHO3P24031 467 aa1.09□□□□□ -2.24
VAM6YDL077C SAT4P25333 603 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C RVS161P25343 265 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C GFD2P25370 566 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C RHB1P25378 209 aa1.09□□□□□ -2.24
VAM6YDL077C APL1P27351 700 aa1.09□□□□□ -2.24
VAM6YDL077C SEC65P29478 273 aa1.09□□□□□ -2.24
VAM6YDL077C APE2P32454 952 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C GSH1P32477 678 aa1.09□□□□□ -2.24
VAM6YDL077C KRE6P32486 720 aa1.09□□□□□ -2.24
VAM6YDL077C NDC1P32500 655 aa1.09□□□□□ -2.24
VAM6YDL077C ECM25P32525 599 aa1.09□□□□□ -2.24
VAM6YDL077C RAD24P32641 659 aa1.09□□□□□ -2.24
VAM6YDL077C RRN6P32786 894 aa1.09□□□□□ -2.24
VAM6YDL077C CYM1P32898 989 aa1.09□□□□□ -2.24
VAM6YDL077C SRB2P34162 210 aa1.09□□□□□ -2.24
VAM6YDL077C KES1P35844 434 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C STB6P36085 766 aa1.09□□□□□ -2.24
VAM6YDL077C BAP2P38084 609 aa1.09□□□□□ -2.24
VAM6YDL077C PCH2P38126 564 aa1.09□□□□□ -2.24
VAM6YDL077C APD1P38281 316 aa1.09□□□□□ -2.24
VAM6YDL077C YMR262WP38430 313 aa1.09□□□□□ -2.24
VAM6YDL077C RFC3P38629 340 aa1.09□□□□□ -2.24
VAM6YDL077C RRP8P38961 392 aaKnown RBP1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms