RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP11, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP11	YDL043C	ADA2	Q02336	434 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	MTG1	Q03151	367 aa	Predicted RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	USA1	Q03714	838 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	MFB1	Q04922	465 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	CRF1	Q04930	467 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	YLR287C	Q05881	355 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	ADE13	Q05911	482 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	IRC3	Q06683	689 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	TSR1	Q07381	788 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	TMA16	Q08687	178 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	ERG27	Q12452	347 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	HSH49	Q99181	213 aa	Predicted RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	PNO1	Q99216	274 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	ALG7	P07286	448 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	ERG8	P24521	451 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	VPH1	P32563	840 aa	Known RBP	4.04	□□□□□ -1.76
PRP11	YDL043C	NPL6	P32832	435 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	THI80	P35202	319 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	SLX1	P38324	304 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	TCD1	P38756	429 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	BUD16	P39988	312 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	RIO2	P40160	425 aa	Known RBP	4.04	□□□□□ -1.76
PRP11	YDL043C	YIL161W	P40449	235 aa	Known RBP	4.04	□□□□□ -1.76
PRP11	YDL043C	YRB1	P41920	201 aa	Known RBP	4.04	□□□□□ -1.76
PRP11	YDL043C	ARE2	P53629	642 aa	Known RBP	4.04	□□□□□ -1.76
PRP11	YDL043C	RTC4	P53850	401 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	ZDS2	P54786	942 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
PRP11	YDL043C	YSA1	Q01976	231 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	TAF11	Q04226	346 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	VPS20	Q04272	221 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	SWA2	Q06677	668 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	YDL073W	Q07454	984 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	NUS1	Q12063	375 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	USV1	Q12132	391 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	HUA2	Q12134	243 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	YBR255C-A	Q3E776	120 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	YBR126W-A	Q8TGU7	68 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	YOR111W	Q99210	232 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	VCX1	Q99385	411 aa		4.04	□□□□□ -1.76
PRP11	YDL043C	SEC53	P07283	254 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	CDC60	P26637	1090 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	HRR25	P29295	494 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	NTG1	P31378	399 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	CDC5	P32562	705 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	SSO1	P32867	290 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	MIA40	P36046	403 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	GEX2	P36173	615 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	TIF5	P38431	405 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
PRP11	YDL043C	YJL206C	P39529	758 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	SAP1	P39955	897 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	PHB1	P40961	287 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	RMD8	P43620	662 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	SNF12	P53628	566 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	HST1	P53685	503 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	DAK1	P54838	584 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	MFM1	Q02783	413 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	FCP1	Q03254	732 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	RSM28	Q03430	361 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	UFO1	Q04511	668 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	STP3	Q05937	343 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	UTP21	Q06078	939 aa	Predicted RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	CRN1	Q06440	651 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	SPN1	Q06505	410 aa	Predicted RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	ENT4	Q07872	247 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	AIM39	Q08223	395 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	RKI1	Q12189	258 aa		4.03	□□□□□ -1.76
PRP11	YDL043C	NOT5	Q12514	560 aa	Predicted RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	LSO2	Q3E772	92 aa	Known RBP	4.03	□□□□□ -1.76
PRP11	YDL043C	CFT1	Q06632	1357 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	SWI1	P09547	1314 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	GCN4	P03069	281 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	PPR1	P07272	904 aa	Predicted RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	SUI3	P09064	285 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	HOM3	P10869	527 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	CKA1	P15790	372 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	FUR1	P18562	216 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	PDE1	P22434	369 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	PRE8	P23639	250 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	CNE1	P27825	502 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	PAP1	P29468	568 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	YME2	P32843	850 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	BMH2	P34730	273 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	APL3	P38065	1025 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	YHR131C	P38835	850 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	UBP7	P40453	1071 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	ARF3	P40994	183 aa	RIP-Chip data	4.02	□□□□□ -1.77	not detected
PRP11	YDL043C	THI6	P41835	540 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	AAD10	P47182	288 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	TRF5	P48561	642 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	ATP22	P50273	684 aa	Predicted RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	PHO23	P50947	330 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	NUP84	P52891	726 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	DIP5	P53388	608 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	ATG4	P53867	494 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	RPS15	Q01855	142 aa	Known RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	SYF1	Q04048	859 aa	Predicted RBP	4.02	□□□□□ -1.77
PRP11	YDL043C	ECM11	Q04110	302 aa		4.02	□□□□□ -1.77
PRP11	YDL043C	GTB1	Q04924	702 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms