RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W GND1P38720 489 aaKnown RBP3.06□□□□□ -1.92
SWD3YBR175W YHR218WP38899 603 aa3.06□□□□□ -1.92
SWD3YBR175W YJL193WP39542 402 aa3.06□□□□□ -1.92
SWD3YBR175W PCL7P40186 285 aa3.06□□□□□ -1.92
SWD3YBR175W LRO1P40345 661 aa3.06□□□□□ -1.92
SWD3YBR175W SGN1P40561 250 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
SWD3YBR175W IME4P41833 600 aa3.06□□□□□ -1.92
SWD3YBR175W COS12P53053 380 aa3.06□□□□□ -1.92
SWD3YBR175W CUL3P53202 744 aa3.06□□□□□ -1.92
SWD3YBR175W YGR066CP53242 292 aa3.06□□□□□ -1.92
SWD3YBR175W ADA2Q02336 434 aa3.06□□□□□ -1.92
SWD3YBR175W SLU7Q02775 382 aaKnown RBP3.06□□□□□ -1.92
SWD3YBR175W MTG1Q03151 367 aaPredicted RBP3.06□□□□□ -1.92
SWD3YBR175W ARX1Q03862 593 aaKnown RBP3.06□□□□□ -1.92
SWD3YBR175W ROY1Q04847 553 aa3.06□□□□□ -1.92
SWD3YBR175W PEX19Q07418 342 aa3.06□□□□□ -1.92
SWD3YBR175W YEH1Q07804 573 aa3.06□□□□□ -1.92
SWD3YBR175W DIA2Q08496 732 aaPredicted RBP3.06□□□□□ -1.92
SWD3YBR175W SPE3Q12074 293 aaKnown RBP3.06□□□□□ -1.92
SWD3YBR175W TRM11Q12463 433 aa3.06□□□□□ -1.92
SWD3YBR175W SKS1Q12505 502 aa3.06□□□□□ -1.92
SWD3YBR175W AFI1Q99222 893 aa3.06□□□□□ -1.92
SWD3YBR175W YOR019WQ99248 730 aa3.06□□□□□ -1.92
SWD3YBR175W YPT6Q99260 215 aa3.06□□□□□ -1.92
SWD3YBR175W ISN1Q99312 450 aa3.06□□□□□ -1.92
SWD3YBR175W LAT1P12695 482 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W CAF20P12962 161 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W CPR2P23285 205 aa3.05□□□□□ -1.92
SWD3YBR175W PEX1P24004 1043 aa3.05□□□□□ -1.92
SWD3YBR175W FEN2P25621 512 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W YCR061WP25639 631 aa3.05□□□□□ -1.92
SWD3YBR175W URK1P27515 501 aa3.05□□□□□ -1.92
SWD3YBR175W MSP1P28737 362 aa3.05□□□□□ -1.92
SWD3YBR175W HRR25P29295 494 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W DSS4P32601 143 aa3.05□□□□□ -1.92
SWD3YBR175W TFB1P32776 642 aa3.05□□□□□ -1.92
SWD3YBR175W KES1P35844 434 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W CST26P38226 397 aa3.05□□□□□ -1.92
SWD3YBR175W CCT6P39079 546 aa3.05□□□□□ -1.92
SWD3YBR175W TMN3P40071 706 aa3.05□□□□□ -1.92
SWD3YBR175W YIL077CP40508 320 aa3.05□□□□□ -1.92
SWD3YBR175W LYS4P49367 693 aaPredicted RBP3.05□□□□□ -1.92
SWD3YBR175W YGL036WP53185 909 aaPredicted RBP3.05□□□□□ -1.92
SWD3YBR175W TOF1P53840 1238 aa3.05□□□□□ -1.92
SWD3YBR175W ERG5P54781 538 aa3.05□□□□□ -1.92
SWD3YBR175W GRX3Q03835 250 aa3.05□□□□□ -1.92
SWD3YBR175W DPB4Q04603 196 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W CRF1Q04930 467 aa3.05□□□□□ -1.92
SWD3YBR175W MRD1Q06106 887 aaKnown RBP3.05□□□□□ -1.92
SWD3YBR175W ARR3Q06598 404 aa3.05□□□□□ -1.92
SWD3YBR175W YFT2Q06676 274 aa3.05□□□□□ -1.92
SWD3YBR175W ATG29Q12092 213 aa3.05□□□□□ -1.92
SWD3YBR175W SWT1Q12104 458 aa3.05□□□□□ -1.92
SWD3YBR175W IRC20Q06554 1556 aa3.04□□□□□ -1.92
SWD3YBR175W VPS34P22543 875 aa3.04□□□□□ -1.92
SWD3YBR175W CAD1P24813 409 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W SPB1P25582 841 aaPredicted RBP3.04□□□□□ -1.92
SWD3YBR175W SRB5P32585 307 aa3.04□□□□□ -1.92
SWD3YBR175W GYP6P32806 458 aa3.04□□□□□ -1.92
SWD3YBR175W HEL1P36113 551 aa3.04□□□□□ -1.92
SWD3YBR175W OTU2P38747 307 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W YHR054CP38780 354 aa3.04□□□□□ -1.92
SWD3YBR175W RPP1P38786 293 aa3.04□□□□□ -1.92
SWD3YBR175W YJL206CP39529 758 aa3.04□□□□□ -1.92
SWD3YBR175W BUD16P39988 312 aa3.04□□□□□ -1.92
SWD3YBR175W RTT105P40063 208 aa3.04□□□□□ -1.92
SWD3YBR175W ATF1P40353 525 aa3.04□□□□□ -1.92
SWD3YBR175W SEC24P40482 926 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W MAF1P41910 395 aa3.04□□□□□ -1.92
SWD3YBR175W RFX1P48743 811 aa3.04□□□□□ -1.92
SWD3YBR175W MTL1P53214 551 aa3.04□□□□□ -1.92
SWD3YBR175W MRPS35P53292 345 aa3.04□□□□□ -1.92
SWD3YBR175W HST1P53685 503 aa3.04□□□□□ -1.92
SWD3YBR175W RPA49Q01080 415 aaPredicted RBP3.04□□□□□ -1.92
SWD3YBR175W KIN4Q01919 800 aa3.04□□□□□ -1.92
SWD3YBR175W EFR3Q03653 782 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W CTK1Q03957 528 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W GTB1Q04924 702 aa3.04□□□□□ -1.92
SWD3YBR175W RQC1Q05468 723 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W YLR456WQ06199 204 aa3.04□□□□□ -1.92
SWD3YBR175W MMR1Q06324 491 aa3.04□□□□□ -1.92
SWD3YBR175W YDL073WQ07454 984 aa3.04□□□□□ -1.92
SWD3YBR175W LUC7Q07508 261 aaPredicted RBP3.04□□□□□ -1.92
SWD3YBR175W APL4Q12028 832 aa3.04□□□□□ -1.92
SWD3YBR175W RPN5Q12250 445 aaKnown RBP3.04□□□□□ -1.92
SWD3YBR175W YBR085C-AO43137 85 aa3.03□□□□□ -1.92
SWD3YBR175W YML003WP0CF16 290 aa3.03□□□□□ -1.92
SWD3YBR175W YML002WP0CF17 737 aa3.03□□□□□ -1.92
SWD3YBR175W PRP28P23394 588 aa3.03□□□□□ -1.92
SWD3YBR175W LRE1P25579 583 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W YIH1P25637 258 aa3.03□□□□□ -1.92
SWD3YBR175W SYN8P31377 255 aa3.03□□□□□ -1.92
SWD3YBR175W BCS1P32839 456 aa3.03□□□□□ -1.92
SWD3YBR175W RIB7P33312 244 aa3.03□□□□□ -1.92
SWD3YBR175W ADH5P38113 351 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W MUP3P38734 546 aa3.03□□□□□ -1.92
SWD3YBR175W ERC1P38767 581 aa3.03□□□□□ -1.92
SWD3YBR175W YHR097CP38809 366 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W AFG3P39925 761 aa3.03□□□□□ -1.92
SWD3YBR175W NAS2P40555 220 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms