RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SEPT4O43236 478 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 ARRDC4Q8NCT1 418 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 MROH8Q9H579 483 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 SLC5A4Q9NY91 659 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 HOXC10Q9NYD6 342 aa17.66■□□□□ 0.42
DNMT3A-207ENST00000461228 COG2Q14746 738 aa17.65■□□□□ 0.42
DNMT3A-207ENST00000461228 ZYXQ15942 572 aaKnown RBP17.65■□□□□ 0.42
DNMT3A-207ENST00000461228 ITPRIPQ8IWB1 547 aa17.65■□□□□ 0.42
DNMT3A-207ENST00000461228 LBHD1Q9BQE6 289 aaPredicted RBP17.65■□□□□ 0.42
DNMT3A-207ENST00000461228 SPATC1LQ9H0A9 340 aa17.65■□□□□ 0.42
DNMT3A-207ENST00000461228 PRKAG2Q9UGJ0 569 aa17.65■□□□□ 0.42
DNMT3A-207ENST00000461228 TTC28Q96AY4 2481 aa17.64■□□□□ 0.42
DNMT3A-207ENST00000461228 TMEM265A0A087WTH1 108 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 PDE6AP16499 860 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 ADORA2AP29274 412 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 PLCD1P51178 756 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 Q7L0L9 218 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 MOV10L1Q9BXT6 1211 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.41
DNMT3A-207ENST00000461228 TCRBV5S4A2TA0A5A2 114 aa17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 KBTBD13C9JR72 458 aa17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 AACSQ86V21 672 aa17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 NPLOC4Q8TAT6 608 aa17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 C1orf115Q9H7X2 142 aa17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
DNMT3A-207ENST00000461228 WDR46O15213 610 aaKnown RBP17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 RLBP1P12271 317 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 CYP2C19P33261 490 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 COPB2P35606 906 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 RTP1P59025 263 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 MDM2Q00987 491 aaPredicted RBP17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 SEPT2Q15019 361 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 WDR78Q5VTH9 848 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 TRPV1Q8NER1 839 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 GUCD1Q96NT3 240 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 TMX2Q9Y320 296 aa17.62■□□□□ 0.41
DNMT3A-207ENST00000461228 A0A1W2PRG0 241 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 SLC25A27O95847 323 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 ERCC3P19447 782 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 SLC9C2Q5TAH2 1124 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 DPP9Q86TI2 863 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 CCDC17Q96LX7 622 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 VCPKMTQ9H867 229 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 ARHGEF10LQ9HCE6 1279 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 ATP8A2Q9NTI2 1148 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 DIS3Q9Y2L1 958 aaKnown RBP17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
DNMT3A-207ENST00000461228 DSG3P32926 999 aa17.6■□□□□ 0.41
DNMT3A-207ENST00000461228 SMAD3P84022 425 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-207ENST00000461228 ZNF697Q5TEC3 545 aa17.6■□□□□ 0.41
DNMT3A-207ENST00000461228 CLASRPQ8N2M8 674 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-207ENST00000461228 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
DNMT3A-207ENST00000461228 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
DNMT3A-207ENST00000461228 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 MYH4Q9Y623 1939 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 CNGA1P29973 690 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 ICA1Q05084 483 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 MAML3Q96JK9 1138 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 PDLIM7Q9NR12 457 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
DNMT3A-207ENST00000461228 MS4A1P11836 297 aa17.58■□□□□ 0.4
DNMT3A-207ENST00000461228 SLC39A5Q6ZMH5 540 aa17.58■□□□□ 0.4
DNMT3A-207ENST00000461228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
DNMT3A-207ENST00000461228 PHF24Q9UPV7 400 aa17.58■□□□□ 0.4
DNMT3A-207ENST00000461228 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
DNMT3A-207ENST00000461228 COBLO75128 1261 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 HMMRO75330 724 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 FLOT1O75955 427 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 FCER1AP12319 257 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 LRRC41Q15345 812 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 C16orf86Q6ZW13 317 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 LCORLQ8N3X6 602 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 LRRC37A2A6NM11 1700 aa17.57■□□□□ 0.4
DNMT3A-207ENST00000461228 MPHOSPH10O00566 681 aaKnown RBP17.56■□□□□ 0.4
DNMT3A-207ENST00000461228 ADD2P35612 726 aa17.56■□□□□ 0.4
DNMT3A-207ENST00000461228 RIOX2Q8IUF8 465 aa17.56■□□□□ 0.4
DNMT3A-207ENST00000461228 SDR42E1Q8WUS8 393 aa17.56■□□□□ 0.4
DNMT3A-207ENST00000461228 SYNPO2Q9UMS6 1093 aa17.56■□□□□ 0.4
DNMT3A-207ENST00000461228 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 ATN1P54259 1190 aaPredicted RBP17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 UBE3CQ15386 1083 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 FAM47AQ5JRC9 791 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 GJC2Q5T442 439 aaPredicted RBP17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 C12orf60Q5U649 245 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms