RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ubr3Q5U430 1889 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Igsf9bE9PZ19 1328 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gm45140A0A0N4SUM8 220 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Psd3Q2PFD7 1037 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Arglu1Q3UL36 271 aaKnown RBP12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Cyp7b1Q60991 507 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ano10Q8BH79 659 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Tcp11l1Q8BTG3 509 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Kcnk13Q8R1P5 405 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ndufv1Q91YT0 464 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ftl1P29391 183 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Mylk4Q5SUV5 386 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Mxd3Q80US8 206 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 IqcgQ80W32 419 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Smc1bQ920F6 1248 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Vps16Q920Q4 839 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ptpn12P35831 775 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Nap1l2P51860 460 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Nbr1P97432 988 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Esyt2Q3TZZ7 845 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Kmt5bQ3U8K7 883 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Pim2Q62070 370 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ctdspl2Q8BG15 465 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Tob2Q9JM55 345 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 GdaQ9R111 454 aa12.86□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Phldb3E9QAF4 648 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ampd3O08739 766 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Serpinb6bO08804 377 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Cyp3a25O09158 503 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Traf3ip1Q149C2 625 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 C87499Q3UX49 493 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ddx49Q4FZF3 480 aaKnown RBP12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Kiaa0319Q5SZV5 1081 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ovgp1Q62010 721 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ift122Q6NWV3 1182 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Tbc1d31Q6NXY1 996 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Kif1bpQ6ZPU9 617 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Arid5bQ8BM75 1188 aaKnown RBP12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Sfr1Q8BP27 319 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 CrebzfQ91ZR3 358 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Hic2Q9JLZ6 619 aaKnown RBP12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Kcnh3Q9WVJ0 1095 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Vnn1Q9Z0K8 512 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gdf11Q9Z1W4 405 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Snapc4Q8BP86 1333 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Wnt7aP24383 349 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Arhgef16Q3U5C8 713 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Kif22Q3V300 660 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Usp49Q6P9L4 685 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Tspyl4Q8VD63 406 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 MbipQ99LQ1 341 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Hs6st3Q9QYK4 470 aa12.85□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ktn1Q61595 1327 aaKnown RBP12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Rrm1P07742 792 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Rpusd2Q149F1 553 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ces3aQ63880 571 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Dnaaf2Q8BPI1 814 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gimap7Q8R379 293 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ces3bQ8VCU1 571 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Pcdhgc5Q91XW9 944 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Hip1rQ9JKY5 1068 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Col20a1Q923P0 1320 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 MeiocA2AG06 965 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Atp6v0a2P15920 856 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Mdh1bQ5F204 500 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 DlatQ8BMF4 642 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Mis12Q9CY25 206 aa12.84□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ano3A2AHL1 981 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Card6E9PWH2 1175 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Cavin1O54724 392 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Klra1P20937 262 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Pex1Q5BL07 1284 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Klra4Q60651 263 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ccdc150Q8CDI7 1110 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Prpf3Q922U1 683 aaKnown RBP12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Polr2dQ9D7M8 142 aaKnown RBP12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Atp8b5A3FIN4 1183 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Stag2O35638 1231 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gjb4Q02738 266 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Tax1bp1Q3UKC1 814 aaKnown RBP12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Slu7Q8BHJ9 585 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Q8K2W9 541 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Hps4Q99KG7 671 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ranbp17Q99NF8 1088 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Gpaa1Q9WTK3 621 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Atp12aQ9Z1W8 1035 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Peak1Q69Z38 1735 aa12.83□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Kifc2O08672 792 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Calm1P0DP26 149 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Calm2P0DP27 149 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Calm3P0DP28 149 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Pacs2Q3V3Q7 862 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Zkscan4Q5SZT6 480 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ppp2r5bQ6PD28 497 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Thoc1Q8R3N6 657 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Frmd4bQ920B0 1035 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Apobec3Q99J72 440 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Eif4enif1Q9EST3 983 aaKnown RBP12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Jag1Q9QXX0 1218 aa12.82□□□□□ -0.36
Ddx55-201ENSMUST00000071057 Ly75Q60767 1723 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms