Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm25239-201ENSMUST00000174915 86 ntBASIC37.78■■■■□ 3.64
Sfr1Q8BP27 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Sfr1Q8BP27 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Sfr1Q8BP27 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Sfr1Q8BP27 Gm15042-201ENSMUST00000120212 883 ntBASIC33.35■■■□□ 2.93
Sfr1Q8BP27 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Sfr1Q8BP27 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
Sfr1Q8BP27 Gm15045-201ENSMUST00000117359 883 ntBASIC32.63■■■□□ 2.81
Sfr1Q8BP27 Gm24109-201ENSMUST00000175489 103 ntBASIC32.56■■■□□ 2.8
Sfr1Q8BP27 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Sfr1Q8BP27 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sfr1Q8BP27 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Sfr1Q8BP27 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Sfr1Q8BP27 Gm23366-201ENSMUST00000175022 89 ntBASIC31.64■■■□□ 2.66
Sfr1Q8BP27 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.49■■■□□ 2.63
Sfr1Q8BP27 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Sfr1Q8BP27 Psd-208ENSMUST00000224556 2034 ntBASIC31.39■■■□□ 2.62
Sfr1Q8BP27 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sfr1Q8BP27 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Sfr1Q8BP27 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Sfr1Q8BP27 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Sfr1Q8BP27 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Sfr1Q8BP27 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Sfr1Q8BP27 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Sfr1Q8BP27 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Sfr1Q8BP27 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.77■■■□□ 2.52
Sfr1Q8BP27 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Sfr1Q8BP27 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sfr1Q8BP27 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.61■■■□□ 2.49
Sfr1Q8BP27 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sfr1Q8BP27 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sfr1Q8BP27 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Sfr1Q8BP27 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.34■■■□□ 2.45
Sfr1Q8BP27 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Sfr1Q8BP27 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sfr1Q8BP27 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.1■■■□□ 2.41
Sfr1Q8BP27 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Sfr1Q8BP27 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.9■■■□□ 2.38
Sfr1Q8BP27 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sfr1Q8BP27 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.84■■■□□ 2.37
Sfr1Q8BP27 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Sfr1Q8BP27 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Sfr1Q8BP27 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.71■■■□□ 2.35
Sfr1Q8BP27 Gm25238-201ENSMUST00000174914 89 ntBASIC29.7■■■□□ 2.35
Sfr1Q8BP27 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Sfr1Q8BP27 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Sfr1Q8BP27 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Sfr1Q8BP27 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Sfr1Q8BP27 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.45■■■□□ 2.31
Sfr1Q8BP27 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Sfr1Q8BP27 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Sfr1Q8BP27 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Sfr1Q8BP27 Gm27325-201ENSMUST00000175467 74 ntBASIC29.29■■■□□ 2.28
Sfr1Q8BP27 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Sfr1Q8BP27 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.25■■■□□ 2.27
Sfr1Q8BP27 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.24■■■□□ 2.27
Sfr1Q8BP27 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Sfr1Q8BP27 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
Sfr1Q8BP27 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Sfr1Q8BP27 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Sfr1Q8BP27 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Sfr1Q8BP27 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.08■■■□□ 2.25
Sfr1Q8BP27 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Sfr1Q8BP27 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Sfr1Q8BP27 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.01■■■□□ 2.23
Sfr1Q8BP27 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Sfr1Q8BP27 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.93■■■□□ 2.22
Sfr1Q8BP27 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Sfr1Q8BP27 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Sfr1Q8BP27 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.87■■■□□ 2.21
Sfr1Q8BP27 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Sfr1Q8BP27 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Sfr1Q8BP27 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Sfr1Q8BP27 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.78■■■□□ 2.2
Sfr1Q8BP27 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Sfr1Q8BP27 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Sfr1Q8BP27 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
Sfr1Q8BP27 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Sfr1Q8BP27 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.65■■■□□ 2.18
Sfr1Q8BP27 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Sfr1Q8BP27 Rab21-202ENSMUST00000218831 843 ntBASIC28.56■■■□□ 2.16
Sfr1Q8BP27 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.56■■■□□ 2.16
Sfr1Q8BP27 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sfr1Q8BP27 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Sfr1Q8BP27 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.43■■■□□ 2.14
Sfr1Q8BP27 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sfr1Q8BP27 Gm25262-201ENSMUST00000174934 133 ntBASIC28.34■■■□□ 2.13
Sfr1Q8BP27 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Sfr1Q8BP27 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sfr1Q8BP27 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Sfr1Q8BP27 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sfr1Q8BP27 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.22■■■□□ 2.11
Sfr1Q8BP27 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sfr1Q8BP27 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sfr1Q8BP27 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Sfr1Q8BP27 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.08■■■□□ 2.09
Sfr1Q8BP27 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sfr1Q8BP27 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sfr1Q8BP27 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Sfr1Q8BP27 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms