Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm25239-201ENSMUST00000174915 86 ntBASIC44.01■■■■■ 4.64
Pcdhgc5Q91XW9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.93■■■■■ 4.14
Pcdhgc5Q91XW9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
Pcdhgc5Q91XW9 Gm24109-201ENSMUST00000175489 103 ntBASIC38.37■■■■□ 3.73
Pcdhgc5Q91XW9 Gm15042-201ENSMUST00000120212 883 ntBASIC38.02■■■■□ 3.68
Pcdhgc5Q91XW9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Pcdhgc5Q91XW9 Gm15045-201ENSMUST00000117359 883 ntBASIC37.15■■■■□ 3.54
Pcdhgc5Q91XW9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.15■■■■□ 3.54
Pcdhgc5Q91XW9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Pcdhgc5Q91XW9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Pcdhgc5Q91XW9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Pcdhgc5Q91XW9 Gm23366-201ENSMUST00000175022 89 ntBASIC36.63■■■■□ 3.45
Pcdhgc5Q91XW9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Pcdhgc5Q91XW9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.36
Pcdhgc5Q91XW9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.97■■■■□ 3.35
Pcdhgc5Q91XW9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.65■■■■□ 3.3
Pcdhgc5Q91XW9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.57■■■■□ 3.28
Pcdhgc5Q91XW9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Pcdhgc5Q91XW9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Pcdhgc5Q91XW9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
Pcdhgc5Q91XW9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Pcdhgc5Q91XW9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
Pcdhgc5Q91XW9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Pcdhgc5Q91XW9 Gm25238-201ENSMUST00000174914 89 ntBASIC34.9■■■■□ 3.18
Pcdhgc5Q91XW9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Pcdhgc5Q91XW9 Psd-208ENSMUST00000224556 2034 ntBASIC34.82■■■■□ 3.16
Pcdhgc5Q91XW9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.81■■■■□ 3.16
Pcdhgc5Q91XW9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Pcdhgc5Q91XW9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Pcdhgc5Q91XW9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Pcdhgc5Q91XW9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pcdhgc5Q91XW9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.27■■■■□ 3.08
Pcdhgc5Q91XW9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Pcdhgc5Q91XW9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.07■■■■□ 3.04
Pcdhgc5Q91XW9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pcdhgc5Q91XW9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
Pcdhgc5Q91XW9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
Pcdhgc5Q91XW9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
Pcdhgc5Q91XW9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.74■■■□□ 2.99
Pcdhgc5Q91XW9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Pcdhgc5Q91XW9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.69■■■□□ 2.98
Pcdhgc5Q91XW9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.64■■■□□ 2.98
Pcdhgc5Q91XW9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.58■■■□□ 2.97
Pcdhgc5Q91XW9 Gm25262-201ENSMUST00000174934 133 ntBASIC33.55■■■□□ 2.96
Pcdhgc5Q91XW9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Pcdhgc5Q91XW9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Pcdhgc5Q91XW9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Pcdhgc5Q91XW9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Pcdhgc5Q91XW9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.31■■■□□ 2.92
Pcdhgc5Q91XW9 Gm27325-201ENSMUST00000175467 74 ntBASIC33.23■■■□□ 2.91
Pcdhgc5Q91XW9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Pcdhgc5Q91XW9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
Pcdhgc5Q91XW9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
Pcdhgc5Q91XW9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.01■■■□□ 2.87
Pcdhgc5Q91XW9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33■■■□□ 2.87
Pcdhgc5Q91XW9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pcdhgc5Q91XW9 Gm26115-201ENSMUST00000175605 87 ntBASIC32.88■■■□□ 2.85
Pcdhgc5Q91XW9 Rab21-202ENSMUST00000218831 843 ntBASIC32.88■■■□□ 2.85
Pcdhgc5Q91XW9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.84■■■□□ 2.85
Pcdhgc5Q91XW9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.83■■■□□ 2.85
Pcdhgc5Q91XW9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.81■■■□□ 2.84
Pcdhgc5Q91XW9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pcdhgc5Q91XW9 Gm8109-201ENSMUST00000194076 746 ntBASIC32.74■■■□□ 2.83
Pcdhgc5Q91XW9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Pcdhgc5Q91XW9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Pcdhgc5Q91XW9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Pcdhgc5Q91XW9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pcdhgc5Q91XW9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pcdhgc5Q91XW9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Pcdhgc5Q91XW9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Pcdhgc5Q91XW9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.59■■■□□ 2.81
Pcdhgc5Q91XW9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pcdhgc5Q91XW9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Pcdhgc5Q91XW9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.49■■■□□ 2.79
Pcdhgc5Q91XW9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
Pcdhgc5Q91XW9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pcdhgc5Q91XW9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pcdhgc5Q91XW9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.21■■■□□ 2.75
Pcdhgc5Q91XW9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pcdhgc5Q91XW9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.16■■■□□ 2.74
Pcdhgc5Q91XW9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.15■■■□□ 2.74
Pcdhgc5Q91XW9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Pcdhgc5Q91XW9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Pcdhgc5Q91XW9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Pcdhgc5Q91XW9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.1■■■□□ 2.73
Pcdhgc5Q91XW9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Pcdhgc5Q91XW9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Pcdhgc5Q91XW9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pcdhgc5Q91XW9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pcdhgc5Q91XW9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Pcdhgc5Q91XW9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Pcdhgc5Q91XW9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.92■■■□□ 2.7
Pcdhgc5Q91XW9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pcdhgc5Q91XW9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Pcdhgc5Q91XW9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.88■■■□□ 2.69
Pcdhgc5Q91XW9 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.84■■■□□ 2.69
Pcdhgc5Q91XW9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcdhgc5Q91XW9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pcdhgc5Q91XW9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.72■■■□□ 2.67
Pcdhgc5Q91XW9 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.72■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms