RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 NischQ80TM9 1593 aa22.25■■□□□ 1.15
Ddx55-201ENSMUST00000071057 Gm35339A0A140LHH9 1649 aa21.86■■□□□ 1.09
Ddx55-201ENSMUST00000071057 Abcc9P70170 1546 aa21.56■■□□□ 1.04
Ddx55-201ENSMUST00000071057 Abcc8B2RUS7 1588 aa21.16■□□□□ 0.98
Ddx55-201ENSMUST00000071057 Rhox8Q6VSS7 320 aa20.57■□□□□ 0.88
Ddx55-201ENSMUST00000071057 ScribQ80U72 1612 aa19.86■□□□□ 0.77
Ddx55-201ENSMUST00000071057 Rtl1Q7M732 1744 aa19.82■□□□□ 0.76
Ddx55-201ENSMUST00000071057 Dcaf1Q80TR8 1506 aa19.6■□□□□ 0.73
Ddx55-201ENSMUST00000071057 Rb1cc1Q9ESK9 1588 aa19.49■□□□□ 0.71
Ddx55-201ENSMUST00000071057 Kdm5dQ62240 1548 aa19.46■□□□□ 0.71
Ddx55-201ENSMUST00000071057 Ccdc180J3QNE4 1664 aa19.45■□□□□ 0.7
Ddx55-201ENSMUST00000071057 NacadQ5SWP3 1504 aa19.28■□□□□ 0.68
Ddx55-201ENSMUST00000071057 Zcchc6Q5BLK4 1491 aaKnown RBP19.26■□□□□ 0.67
Ddx55-201ENSMUST00000071057 Baz1aO88379 1555 aa19.22■□□□□ 0.67
Ddx55-201ENSMUST00000071057 Ccdc136Q3TVA9 1136 aa19.11■□□□□ 0.65
Ddx55-201ENSMUST00000071057 Sycp2Q9CUU3 1500 aa18.88■□□□□ 0.61
Ddx55-201ENSMUST00000071057 Crybg2B7ZCC2 1516 aa18.82■□□□□ 0.6
Ddx55-201ENSMUST00000071057 Smarca2Q6DIC0 1577 aa18.76■□□□□ 0.59
Ddx55-201ENSMUST00000071057 DiexfQ8BTT6 772 aaKnown RBP18.69■□□□□ 0.58
Ddx55-201ENSMUST00000071057 Trim41Q5NCC3 630 aa18.6■□□□□ 0.57
Ddx55-201ENSMUST00000071057 HrcG5E8J6 738 aa18.59■□□□□ 0.57
Ddx55-201ENSMUST00000071057 BicraF8VPZ9 1578 aa18.51■□□□□ 0.55
Ddx55-201ENSMUST00000071057 Cecr2E9Q2Z1 1453 aa18.45■□□□□ 0.54
Ddx55-201ENSMUST00000071057 Brd4Q9ESU6 1400 aaKnown RBP18.32■□□□□ 0.52
Ddx55-201ENSMUST00000071057 Cngb1E1AZ71 1325 aa18.29■□□□□ 0.52
Ddx55-201ENSMUST00000071057 Pcgf6Q99NA9 353 aa18.24■□□□□ 0.51
Ddx55-201ENSMUST00000071057 Synj1Q8CHC4 1574 aa18.23■□□□□ 0.51
Ddx55-201ENSMUST00000071057 Ehmt2Q9Z148 1263 aaKnown RBP18.22■□□□□ 0.51
Ddx55-201ENSMUST00000071057 Cep164Q5DU05 1446 aa18.15■□□□□ 0.5
Ddx55-201ENSMUST00000071057 CftrP26361 1476 aa18.12■□□□□ 0.49
Ddx55-201ENSMUST00000071057 Esf1Q3V1V3 845 aaKnown RBP18.12■□□□□ 0.49
Ddx55-201ENSMUST00000071057 Amer1Q7TS75 1132 aa18.12■□□□□ 0.49
Ddx55-201ENSMUST00000071057 Chic1Q8CBW7 227 aa18.1■□□□□ 0.49
Ddx55-201ENSMUST00000071057 Myt1Q8CFC2 1127 aa18.1■□□□□ 0.49
Ddx55-201ENSMUST00000071057 Golga3P55937 1487 aa18.08■□□□□ 0.48
Ddx55-201ENSMUST00000071057 Rsf1E9PWW9 1441 aaKnown RBP18.08■□□□□ 0.48
Ddx55-201ENSMUST00000071057 Smarca4Q3TKT4 1613 aaKnown RBP18.03■□□□□ 0.48
Ddx55-201ENSMUST00000071057 Ccdc88bQ4QRL3 1481 aa18■□□□□ 0.47
Ddx55-201ENSMUST00000071057 Cttnbp2B9EJA2 1648 aa18■□□□□ 0.47
Ddx55-201ENSMUST00000071057 Gab3Q8BSM5 595 aa17.99■□□□□ 0.47
Ddx55-201ENSMUST00000071057 Rpgrip1Q9EPQ2 1331 aa17.99■□□□□ 0.47
Ddx55-201ENSMUST00000071057 Bcl11aQ9QYE3 773 aa17.97■□□□□ 0.47
Ddx55-201ENSMUST00000071057 CenpbP27790 599 aa17.93■□□□□ 0.46
Ddx55-201ENSMUST00000071057 Pds5bQ4VA53 1446 aaKnown RBP17.88■□□□□ 0.45
Ddx55-201ENSMUST00000071057 Top2bQ64511 1612 aa17.87■□□□□ 0.45
Ddx55-201ENSMUST00000071057 Acin1Q9JIX8 1338 aaKnown RBP17.86■□□□□ 0.45
Ddx55-201ENSMUST00000071057 Iqgap2Q3UQ44 1575 aa17.83■□□□□ 0.44
Ddx55-201ENSMUST00000071057 Cc2d2aQ8CFW7 1633 aa17.78■□□□□ 0.44
Ddx55-201ENSMUST00000071057 Atad2bE9Q166 1460 aaKnown RBP17.76■□□□□ 0.43
Ddx55-201ENSMUST00000071057 Plppr3Q7TPB0 716 aa17.75■□□□□ 0.43
Ddx55-201ENSMUST00000071057 Thoc2B1AZI6 1594 aaKnown RBP17.75■□□□□ 0.43
Ddx55-201ENSMUST00000071057 PrkcshO08795 521 aa17.67■□□□□ 0.42
Ddx55-201ENSMUST00000071057 Ttbk1Q6PCN3 1308 aa17.66■□□□□ 0.42
Ddx55-201ENSMUST00000071057 Fmn1Q05860 1466 aa17.62■□□□□ 0.41
Ddx55-201ENSMUST00000071057 CatipB9EKE5 520 aa17.53■□□□□ 0.4
Ddx55-201ENSMUST00000071057 Frmpd1A2AKB4 1549 aa17.51■□□□□ 0.39
Ddx55-201ENSMUST00000071057 Top2aQ01320 1528 aaKnown RBP17.51■□□□□ 0.39
Ddx55-201ENSMUST00000071057 Las1lA2BE28 776 aaKnown RBP17.49■□□□□ 0.39
Ddx55-201ENSMUST00000071057 Wdr62Q3U3T8 1523 aa17.48■□□□□ 0.39
Ddx55-201ENSMUST00000071057 Ercc6F8VPZ5 1481 aa17.47■□□□□ 0.39
Ddx55-201ENSMUST00000071057 Baz1bQ9Z277 1479 aa17.47■□□□□ 0.39
Ddx55-201ENSMUST00000071057 Rapgef2Q8CHG7 1496 aa17.43■□□□□ 0.38
Ddx55-201ENSMUST00000071057 Myt1lP97500 1187 aa17.4■□□□□ 0.38
Ddx55-201ENSMUST00000071057 Npm2Q80W85 207 aa17.39■□□□□ 0.37
Ddx55-201ENSMUST00000071057 Fam135aQ6NS59 1506 aa17.38■□□□□ 0.37
Ddx55-201ENSMUST00000071057 Dnajc5bQ9CQ94 199 aa17.38■□□□□ 0.37
Ddx55-201ENSMUST00000071057 Ube2uB1AUC4 352 aa17.37■□□□□ 0.37
Ddx55-201ENSMUST00000071057 TnnQ80Z71 1560 aa17.35■□□□□ 0.37
Ddx55-201ENSMUST00000071057 Il27Q8K3I6 234 aa17.34■□□□□ 0.37
Ddx55-201ENSMUST00000071057 Cep162Q6ZQ06 1403 aa17.33■□□□□ 0.36
Ddx55-201ENSMUST00000071057 Kif15Q6P9L6 1387 aa17.32■□□□□ 0.36
Ddx55-201ENSMUST00000071057 Unc13aQ4KUS2 1712 aa17.31■□□□□ 0.36
Ddx55-201ENSMUST00000071057 Lamc3Q9R0B6 1581 aa17.27■□□□□ 0.36
Ddx55-201ENSMUST00000071057 Mier1Q5UAK0 511 aa17.2■□□□□ 0.34
Ddx55-201ENSMUST00000071057 PtprkP35822 1457 aa17.18■□□□□ 0.34
Ddx55-201ENSMUST00000071057 1700123L14RikQ3V2K7 440 aa17.18■□□□□ 0.34
Ddx55-201ENSMUST00000071057 UbtfP25976 765 aaKnown RBP17.17■□□□□ 0.34
Ddx55-201ENSMUST00000071057 Camsap1A2AHC3 1581 aa17.15■□□□□ 0.34
Ddx55-201ENSMUST00000071057 Phldb1Q6PDH0 1371 aaKnown RBP17.14■□□□□ 0.34
Ddx55-201ENSMUST00000071057 Eif4g1Q6NZJ6 1600 aaKnown RBP17.14■□□□□ 0.33
Ddx55-201ENSMUST00000071057 Ubl4bQ9CQ84 188 aa17.11■□□□□ 0.33
Ddx55-201ENSMUST00000071057 Ccdc18Q640L5 1455 aa17.09■□□□□ 0.33
Ddx55-201ENSMUST00000071057 Arhgap35Q91YM2 1499 aa17.09■□□□□ 0.33
Ddx55-201ENSMUST00000071057 Clip1Q922J3 1391 aa17.07■□□□□ 0.32
Ddx55-201ENSMUST00000071057 NrkQ9R0G8 1455 aa17.06■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Zeb1Q64318 1117 aa17.06■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Cux2P70298 1426 aa17.05■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Neurod1Q60867 357 aa17.05■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Shroom4Q1W617 1475 aa17.05■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Plekhg3Q4VAC9 1341 aa17.03■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Grin2bQ01097 1482 aa17.02■□□□□ 0.32
Ddx55-201ENSMUST00000071057 Npm1Q61937 292 aaKnown RBP17■□□□□ 0.31
Ddx55-201ENSMUST00000071057 NefmP08553 848 aa16.98■□□□□ 0.31
Ddx55-201ENSMUST00000071057 Ap3b1Q9Z1T1 1105 aa16.96■□□□□ 0.31
Ddx55-201ENSMUST00000071057 Eea1Q8BL66 1411 aa16.91■□□□□ 0.3
Ddx55-201ENSMUST00000071057 Map3k1P53349 1493 aa16.89■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Arap1Q4LDD4 1452 aa16.89■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Supt5hO55201 1082 aaKnown RBP16.89■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Setd5Q5XJV7 1441 aa16.88■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Mroh2bQ7M6Y6 1581 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 8.3 ms