Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm25239-201ENSMUST00000174915 86 ntBASIC45.95■■■■■ 4.95
Col20a1Q923P0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.45■■■■■ 4.39
Col20a1Q923P0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
Col20a1Q923P0 Gm15042-201ENSMUST00000120212 883 ntBASIC40.28■■■■■ 4.04
Col20a1Q923P0 Gm24109-201ENSMUST00000175489 103 ntBASIC39.77■■■■□ 3.96
Col20a1Q923P0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Col20a1Q923P0 Gm15045-201ENSMUST00000117359 883 ntBASIC39.4■■■■□ 3.9
Col20a1Q923P0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Col20a1Q923P0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
Col20a1Q923P0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.8■■■■□ 3.8
Col20a1Q923P0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
Col20a1Q923P0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.51■■■■□ 3.76
Col20a1Q923P0 Gm23366-201ENSMUST00000175022 89 ntBASIC38.42■■■■□ 3.74
Col20a1Q923P0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
Col20a1Q923P0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Col20a1Q923P0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Col20a1Q923P0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.38■■■■□ 3.57
Col20a1Q923P0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.24■■■■□ 3.55
Col20a1Q923P0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.17■■■■□ 3.54
Col20a1Q923P0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
Col20a1Q923P0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.01■■■■□ 3.52
Col20a1Q923P0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Col20a1Q923P0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Col20a1Q923P0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.8■■■■□ 3.48
Col20a1Q923P0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.77■■■■□ 3.48
Col20a1Q923P0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.76■■■■□ 3.48
Col20a1Q923P0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.66■■■■□ 3.46
Col20a1Q923P0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.63■■■■□ 3.45
Col20a1Q923P0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.62■■■■□ 3.45
Col20a1Q923P0 Psd-208ENSMUST00000224556 2034 ntBASIC36.57■■■■□ 3.44
Col20a1Q923P0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Col20a1Q923P0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Col20a1Q923P0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Col20a1Q923P0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
Col20a1Q923P0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.24■■■■□ 3.39
Col20a1Q923P0 Gm25238-201ENSMUST00000174914 89 ntBASIC36.22■■■■□ 3.39
Col20a1Q923P0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Col20a1Q923P0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.97■■■■□ 3.35
Col20a1Q923P0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Col20a1Q923P0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.6■■■■□ 3.29
Col20a1Q923P0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
Col20a1Q923P0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Col20a1Q923P0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Col20a1Q923P0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.45■■■■□ 3.27
Col20a1Q923P0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.35■■■■□ 3.25
Col20a1Q923P0 Gm27325-201ENSMUST00000175467 74 ntBASIC35.32■■■■□ 3.25
Col20a1Q923P0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Col20a1Q923P0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Col20a1Q923P0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.2■■■■□ 3.23
Col20a1Q923P0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Col20a1Q923P0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
Col20a1Q923P0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
Col20a1Q923P0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.01■■■■□ 3.19
Col20a1Q923P0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.96■■■■□ 3.19
Col20a1Q923P0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Col20a1Q923P0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.85■■■■□ 3.17
Col20a1Q923P0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Col20a1Q923P0 Gm25262-201ENSMUST00000174934 133 ntBASIC34.67■■■■□ 3.14
Col20a1Q923P0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Col20a1Q923P0 Rab21-202ENSMUST00000218831 843 ntBASIC34.62■■■■□ 3.13
Col20a1Q923P0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Col20a1Q923P0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Col20a1Q923P0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Col20a1Q923P0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.58■■■■□ 3.13
Col20a1Q923P0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Col20a1Q923P0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Col20a1Q923P0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.5■■■■□ 3.11
Col20a1Q923P0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Col20a1Q923P0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
Col20a1Q923P0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Col20a1Q923P0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
Col20a1Q923P0 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.34■■■■□ 3.09
Col20a1Q923P0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.33■■■■□ 3.09
Col20a1Q923P0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Col20a1Q923P0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Col20a1Q923P0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Col20a1Q923P0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Col20a1Q923P0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.2■■■■□ 3.07
Col20a1Q923P0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
Col20a1Q923P0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.16■■■■□ 3.06
Col20a1Q923P0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
Col20a1Q923P0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Col20a1Q923P0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.1■■■■□ 3.05
Col20a1Q923P0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Col20a1Q923P0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Col20a1Q923P0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.98■■■■□ 3.03
Col20a1Q923P0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.96■■■■□ 3.03
Col20a1Q923P0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
Col20a1Q923P0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.91■■■■□ 3.02
Col20a1Q923P0 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.9■■■■□ 3.02
Col20a1Q923P0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Col20a1Q923P0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Col20a1Q923P0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Col20a1Q923P0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Col20a1Q923P0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.78■■■■□ 3
Col20a1Q923P0 Gm26115-201ENSMUST00000175605 87 ntBASIC33.77■■■■□ 3
Col20a1Q923P0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Col20a1Q923P0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.67■■■□□ 2.98
Col20a1Q923P0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.67■■■□□ 2.98
Col20a1Q923P0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms