RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCL1	YPR025C	TMT1	P32643	299 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	CNS1	P33313	385 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	IST3	P40565	148 aa	Predicted RBP	4.25	□□□□□ -1.73
CCL1	YPR025C	IRC7	P43623	340 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	CSL4	P53859	292 aa	Predicted RBP	4.25	□□□□□ -1.73
CCL1	YPR025C	TY2A-DR2	Q03483	438 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	VID22	Q05934	901 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	TFC6	Q06339	672 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	BAG7	Q12128	409 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	TY2A-B	Q12260	438 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	TY2A-OR2	Q12293	438 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	TY2A-DR1	Q12392	438 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	TY2A-OR1	Q12439	438 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	TY2A-DR3	Q99303	438 aa		4.25	□□□□□ -1.73
CCL1	YPR025C	CET1	O13297	549 aa	Predicted RBP	4.24	□□□□□ -1.73
CCL1	YPR025C	GEX2	P36173	615 aa		4.24	□□□□□ -1.73
CCL1	YPR025C	ERV46	P39727	415 aa		4.24	□□□□□ -1.73
CCL1	YPR025C	UBP7	P40453	1071 aa		4.24	□□□□□ -1.73
CCL1	YPR025C	ASE1	P50275	885 aa		4.24	□□□□□ -1.73
CCL1	YPR025C	YPR003C	P53394	754 aa		4.24	□□□□□ -1.73
CCL1	YPR025C	ADE16	P54113	591 aa	Known RBP	4.24	□□□□□ -1.73
CCL1	YPR025C	ERG27	Q12452	347 aa	Known RBP	4.24	□□□□□ -1.73
CCL1	YPR025C	ILS1	P09436	1072 aa	Known RBP	4.23	□□□□□ -1.73
CCL1	YPR025C	YSP3	P25036	478 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	PTP1	P25044	335 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	RPT3	P33298	428 aa	Known RBP	4.23	□□□□□ -1.73
CCL1	YPR025C	KAP123	P40069	1113 aa	Known RBP	4.23	□□□□□ -1.73
CCL1	YPR025C	SNO3	P43544	222 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	IDP3	P53982	420 aa	Known RBP	4.23	□□□□□ -1.73
CCL1	YPR025C	RSC9	Q03124	581 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	SWA2	Q06677	668 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	THI3	Q07471	609 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	SSP2	Q08646	371 aa		4.23	□□□□□ -1.73
CCL1	YPR025C	YLR302C	O13544	120 aa		4.22	□□□□□ -1.73
CCL1	YPR025C	YMR085W	P0CF18	432 aa		4.22	□□□□□ -1.73
CCL1	YPR025C	GUK1	P15454	187 aa	Known RBP	4.22	□□□□□ -1.73
CCL1	YPR025C	RRN3	P36070	627 aa		4.22	□□□□□ -1.73
CCL1	YPR025C	RIC1	P40395	1056 aa		4.22	□□□□□ -1.73
CCL1	YPR025C	ULP2	P40537	1034 aa	Predicted RBP	4.22	□□□□□ -1.73
CCL1	YPR025C	YRB30	P53107	440 aa	Predicted RBP	4.22	□□□□□ -1.73
CCL1	YPR025C	DCP2	P53550	970 aa	Known RBP	4.22	□□□□□ -1.73
CCL1	YPR025C	ERG13	P54839	491 aa	Known RBP	4.22	□□□□□ -1.73
CCL1	YPR025C	SUI3	P09064	285 aa	Known RBP	4.21	□□□□□ -1.74
CCL1	YPR025C	RER1	P25560	188 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	MSS51	P32335	436 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	SSH4	P32343	579 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	AXL2	P38928	823 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	ORC5	P50874	479 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	REG1	Q00816	1014 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	CRN1	Q06440	651 aa		4.21	□□□□□ -1.74
CCL1	YPR025C	NEW1	Q08972	1196 aa	Known RBP	4.21	□□□□□ -1.74
CCL1	YPR025C	PCT1	P13259	424 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	ERG8	P24521	451 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	PSD1	P39006	500 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	YER010C	P40011	234 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	PFK26	P40433	827 aa	Known RBP	4.2	□□□□□ -1.74
CCL1	YPR025C	NET1	P47035	1189 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	BNA3	P47039	444 aa	Known RBP	4.2	□□□□□ -1.74
CCL1	YPR025C	CBK1	P53894	756 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	SEC5	P89102	971 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	SNO4	Q04902	237 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	HSP33	Q08914	237 aa	Known RBP	4.2	□□□□□ -1.74
CCL1	YPR025C	HSP32	Q08992	237 aa		4.2	□□□□□ -1.74
CCL1	YPR025C	TFC3	P34111	1160 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	UBP13	P38187	747 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	VID27	P40157	782 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	LTP1	P40347	161 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	ASG1	P40467	964 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	PSA1	P41940	361 aa	Known RBP	4.19	□□□□□ -1.74
CCL1	YPR025C	GLO1	P50107	326 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	FCP1	Q03254	732 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	YMR018W	Q04364	514 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	PFA4	Q12006	378 aa		4.19	□□□□□ -1.74
CCL1	YPR025C	SRP54	P20424	541 aa	Known RBP	4.18	□□□□□ -1.74
CCL1	YPR025C	YCR006C	P25350	157 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	COQ3	P27680	312 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	SRB5	P32585	307 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	ADE17	P38009	592 aa	Known RBP	4.18	□□□□□ -1.74
CCL1	YPR025C	PHM8	P40025	321 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	VPS4	P52917	437 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	PDR8	Q06149	701 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	NUS1	Q12063	375 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	CRC1	Q12289	327 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	YOR019W	Q99248	730 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	VCX1	Q99385	411 aa		4.18	□□□□□ -1.74
CCL1	YPR025C	MRP2	P10663	115 aa	Predicted RBP	4.17	□□□□□ -1.74
CCL1	YPR025C	LHS1	P36016	881 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	ARN1	P38731	627 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	FLO5	P38894	1075 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	MRX1	P40050	688 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	CDC1	P40986	491 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	YJL107C	P42947	387 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	SWP82	P43554	623 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	STP1	Q00947	519 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	YOL087C	Q99247	1116 aa		4.17	□□□□□ -1.74
CCL1	YPR025C	YER145C-A	A0A023PYF4	145 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	GAL4	P04386	881 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	YAP1	P19880	650 aa	Known RBP	4.16	□□□□□ -1.74
CCL1	YPR025C	CDC15	P27636	974 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	MCM10	P32354	571 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms