RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W ATG29Q12092 213 aa6.83□□□□□ -1.32
CIT3YPR001W CFT2Q12102 859 aaPredicted RBP6.83□□□□□ -1.32
CIT3YPR001W SPE4Q12455 300 aa6.83□□□□□ -1.32
CIT3YPR001W YPT6Q99260 215 aa6.83□□□□□ -1.32
CIT3YPR001W CAF20P12962 161 aaKnown RBP6.82□□□□□ -1.32
CIT3YPR001W RRP43P25359 394 aaPredicted RBP6.82□□□□□ -1.32
CIT3YPR001W SYN8P31377 255 aa6.82□□□□□ -1.32
CIT3YPR001W DEF1P35732 738 aaKnown RBP6.82□□□□□ -1.32
CIT3YPR001W APT2P36973 181 aa6.82□□□□□ -1.32
CIT3YPR001W VMA13P41807 478 aaKnown RBP6.82□□□□□ -1.32
CIT3YPR001W LCL3P53153 274 aa6.82□□□□□ -1.32
CIT3YPR001W SCW11P53189 542 aa6.82□□□□□ -1.32
CIT3YPR001W COX18P53239 316 aa6.82□□□□□ -1.32
CIT3YPR001W PDR16P53860 351 aaKnown RBP6.82□□□□□ -1.32
CIT3YPR001W ARP5P53946 755 aa6.82□□□□□ -1.32
CIT3YPR001W MSC2Q03455 724 aa6.82□□□□□ -1.32
CIT3YPR001W NOP6Q07623 225 aaKnown RBP6.82□□□□□ -1.32
CIT3YPR001W PHM7Q12252 991 aa6.82□□□□□ -1.32
CIT3YPR001W TY1A-BLQ12266 440 aa6.82□□□□□ -1.32
CIT3YPR001W SEC12P11655 471 aa6.81□□□□□ -1.32
CIT3YPR001W KIN2P13186 1147 aaKnown RBP6.81□□□□□ -1.32
CIT3YPR001W DBP3P20447 523 aaKnown RBP6.81□□□□□ -1.32
CIT3YPR001W KIN82P25341 720 aa6.81□□□□□ -1.32
CIT3YPR001W NIP100P33420 868 aa6.81□□□□□ -1.32
CIT3YPR001W LTV1P34078 463 aa6.81□□□□□ -1.32
CIT3YPR001W STB5P38699 743 aa6.81□□□□□ -1.32
CIT3YPR001W ERC1P38767 581 aa6.81□□□□□ -1.32
CIT3YPR001W CEM1P39525 442 aa6.81□□□□□ -1.32
CIT3YPR001W AGX1P43567 385 aa6.81□□□□□ -1.32
CIT3YPR001W STU2P46675 888 aa6.81□□□□□ -1.32
CIT3YPR001W MAK10Q02197 733 aa6.81□□□□□ -1.32
CIT3YPR001W YML037CQ03703 340 aa6.81□□□□□ -1.32
CIT3YPR001W HMO1Q03973 246 aaKnown RBP6.81□□□□□ -1.32
CIT3YPR001W RQC1Q05468 723 aaKnown RBP6.81□□□□□ -1.32
CIT3YPR001W MRD1Q06106 887 aaKnown RBP6.81□□□□□ -1.32
CIT3YPR001W BUD7Q08754 746 aa6.81□□□□□ -1.32
CIT3YPR001W CHS5Q12114 671 aaKnown RBP6.81□□□□□ -1.32
CIT3YPR001W RPS9BP05755 195 aaKnown RBP6.8□□□□□ -1.32
CIT3YPR001W RPL1AP0CX43 217 aaKnown RBP6.8□□□□□ -1.32
CIT3YPR001W RPL1BP0CX44 217 aaKnown RBP6.8□□□□□ -1.32
CIT3YPR001W HOM2P13663 365 aaKnown RBP6.8□□□□□ -1.32
CIT3YPR001W YSW1P38280 609 aa6.8□□□□□ -1.32
CIT3YPR001W ALT2P52892 507 aa6.8□□□□□ -1.32
CIT3YPR001W YGR111WP53265 400 aa6.8□□□□□ -1.32
CIT3YPR001W RPA49Q01080 415 aaPredicted RBP6.8□□□□□ -1.32
CIT3YPR001W SIZ1Q04195 904 aa6.8□□□□□ -1.32
CIT3YPR001W SOV1Q04748 898 aa6.8□□□□□ -1.32
CIT3YPR001W YVC1Q12324 675 aa6.8□□□□□ -1.32
CIT3YPR001W PRE2P30656 287 aaKnown RBP6.79□□□□□ -1.32
CIT3YPR001W SEF1P34228 1148 aa6.79□□□□□ -1.32
CIT3YPR001W HSM3P38348 480 aa6.79□□□□□ -1.32
CIT3YPR001W CRG1P38892 291 aaRIP-Chip data6.79□□□□□ -1.32not detected
CIT3YPR001W YDR089WP38966 869 aa6.79□□□□□ -1.32
CIT3YPR001W SMC2P38989 1170 aaKnown RBP6.79□□□□□ -1.32
CIT3YPR001W AKR1P39010 764 aa6.79□□□□□ -1.32
CIT3YPR001W FTR1P40088 404 aa6.79□□□□□ -1.32
CIT3YPR001W LAM5P43560 674 aa6.79□□□□□ -1.32
CIT3YPR001W NUP84P52891 726 aa6.79□□□□□ -1.32
CIT3YPR001W RPN14P53196 417 aa6.79□□□□□ -1.32
CIT3YPR001W TOF2Q02208 771 aa6.79□□□□□ -1.32
CIT3YPR001W KAP120Q02932 1032 aa6.79□□□□□ -1.32
CIT3YPR001W TY1A-MR1Q04215 440 aa6.79□□□□□ -1.32
CIT3YPR001W SOD2P00447 233 aa6.79□□□□□ -1.32
CIT3YPR001W CLC1P17891 233 aa6.79□□□□□ -1.32
CIT3YPR001W SRB2P34162 210 aa6.79□□□□□ -1.32
CIT3YPR001W ATG19P35193 415 aa6.79□□□□□ -1.32
CIT3YPR001W MRPL40P36534 297 aa6.79□□□□□ -1.32
CIT3YPR001W EHT1P38295 451 aa6.79□□□□□ -1.32
CIT3YPR001W CCT6P39079 546 aa6.79□□□□□ -1.32
CIT3YPR001W PKP1P40530 394 aa6.79□□□□□ -1.32
CIT3YPR001W SGN1P40561 250 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
CIT3YPR001W BPL1P48445 690 aaPredicted RBP6.79□□□□□ -1.32
CIT3YPR001W ASI2P53895 289 aa6.79□□□□□ -1.32
CIT3YPR001W YDR239CQ03780 787 aa6.79□□□□□ -1.32
CIT3YPR001W VPS38Q05919 439 aa6.79□□□□□ -1.32
CIT3YPR001W STP3Q05937 343 aa6.79□□□□□ -1.32
CIT3YPR001W DCI1Q08558 271 aa6.79□□□□□ -1.32
CIT3YPR001W RIB2Q12362 591 aaKnown RBP6.79□□□□□ -1.32
CIT3YPR001W TY1A-NL1Q12391 440 aaKnown RBP6.79□□□□□ -1.32
CIT3YPR001W PNO1Q99216 274 aaKnown RBP6.79□□□□□ -1.32
CIT3YPR001W YOR019WQ99248 730 aa6.79□□□□□ -1.32
CIT3YPR001W GPM1P00950 247 aaKnown RBP6.78□□□□□ -1.32
CIT3YPR001W RAS1P01119 309 aa6.78□□□□□ -1.32
CIT3YPR001W RPL6BP05739 176 aaKnown RBP6.78□□□□□ -1.32
CIT3YPR001W PHO91P27514 894 aa6.78□□□□□ -1.32
CIT3YPR001W CMC1P36064 111 aa6.78□□□□□ -1.32
CIT3YPR001W RRT2P38332 387 aa6.78□□□□□ -1.32
CIT3YPR001W TIF5P38431 405 aaKnown RBP6.78□□□□□ -1.32
CIT3YPR001W SIC1P38634 284 aa6.78□□□□□ -1.32
CIT3YPR001W WSS1P38838 269 aa6.78□□□□□ -1.32
CIT3YPR001W IME4P41833 600 aa6.78□□□□□ -1.32
CIT3YPR001W DLD2P46681 530 aaKnown RBP6.78□□□□□ -1.32
CIT3YPR001W RPL6AQ02326 176 aaKnown RBP6.78□□□□□ -1.32
CIT3YPR001W MTG1Q03151 367 aaPredicted RBP6.78□□□□□ -1.32
CIT3YPR001W YPR172WQ06608 200 aa6.78□□□□□ -1.32
CIT3YPR001W POM34Q12445 299 aa6.78□□□□□ -1.32
CIT3YPR001W SPE1P08432 466 aa6.77□□□□□ -1.33
CIT3YPR001W TUP1P16649 713 aa6.77□□□□□ -1.33
CIT3YPR001W DAP2P18962 818 aa6.77□□□□□ -1.33
CIT3YPR001W HNM1P19807 563 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms