RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W FUM1P08417 488 aaKnown RBP2.62□□□□□ -1.99
BRO1YPL084W ILV6P25605 309 aaKnown RBP2.62□□□□□ -1.99
BRO1YPL084W MUD2P36084 527 aaKnown RBP2.62□□□□□ -1.99
BRO1YPL084W NAB3P38996 802 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99 RIP-Chip
BRO1YPL084W YNL058CP53947 316 aa2.62□□□□□ -1.99
BRO1YPL084W YSP3P25036 478 aa2.62□□□□□ -1.99
BRO1YPL084W MRP20P32387 263 aa2.62□□□□□ -1.99
BRO1YPL084W YEL068CP39977 110 aa2.62□□□□□ -1.99
BRO1YPL084W ADE16P54113 591 aaKnown RBP2.62□□□□□ -1.99
BRO1YPL084W SWA2Q06677 668 aa2.62□□□□□ -1.99
BRO1YPL084W NUS1Q12063 375 aa2.62□□□□□ -1.99
BRO1YPL084W BAG7Q12128 409 aa2.62□□□□□ -1.99
BRO1YPL084W RDL1Q12305 139 aaKnown RBP2.62□□□□□ -1.99
BRO1YPL084W ENT1Q12518 454 aa2.62□□□□□ -1.99
BRO1YPL084W VCX1Q99385 411 aa2.62□□□□□ -1.99
BRO1YPL084W GSY2P27472 705 aa2.61□□□□□ -1.99
BRO1YPL084W GSH1P32477 678 aa2.61□□□□□ -1.99
BRO1YPL084W HOT13P36078 116 aa2.61□□□□□ -1.99
BRO1YPL084W IMD2P38697 523 aaKnown RBP2.61□□□□□ -1.99
BRO1YPL084W YJR061WP40355 935 aa2.61□□□□□ -1.99
BRO1YPL084W TMA108P40462 946 aa2.61□□□□□ -1.99
BRO1YPL084W IMD3P50095 523 aaKnown RBP2.61□□□□□ -1.99
BRO1YPL084W TMA64Q04600 565 aaKnown RBP2.61□□□□□ -1.99
BRO1YPL084W CRN1Q06440 651 aa2.61□□□□□ -1.99
BRO1YPL084W RAD34Q06665 692 aa2.61□□□□□ -1.99
BRO1YPL084W OSW1Q08692 278 aa2.61□□□□□ -1.99
BRO1YPL084W NBP2Q12163 236 aa2.61□□□□□ -1.99
BRO1YPL084W RPB2P08518 1224 aaKnown RBP2.61□□□□□ -1.99
BRO1YPL084W ERG11P10614 530 aa2.61□□□□□ -1.99
BRO1YPL084W APD1P38281 316 aa2.61□□□□□ -1.99
BRO1YPL084W VPS4P52917 437 aa2.61□□□□□ -1.99
BRO1YPL084W BSC5P53755 489 aa2.61□□□□□ -1.99
BRO1YPL084W FCP1Q03254 732 aa2.61□□□□□ -1.99
BRO1YPL084W LEA1Q08963 238 aaPredicted RBP2.61□□□□□ -1.99
BRO1YPL084W YOR019WQ99248 730 aa2.61□□□□□ -1.99
BRO1YPL084W HOM2P13663 365 aaKnown RBP2.6□□□□□ -1.99
BRO1YPL084W SRB5P32585 307 aa2.6□□□□□ -1.99
BRO1YPL084W TFC3P34111 1160 aa2.6□□□□□ -1.99
BRO1YPL084W KTR3P38130 404 aaPredicted RBP2.6□□□□□ -1.99
BRO1YPL084W UBP7P40453 1071 aa2.6□□□□□ -1.99
BRO1YPL084W LYS14P40971 790 aa2.6□□□□□ -1.99
BRO1YPL084W DCP2P53550 970 aaKnown RBP2.6□□□□□ -1.99
BRO1YPL084W ATP23P53722 227 aa2.6□□□□□ -1.99
BRO1YPL084W YPL071CQ02864 156 aa2.6□□□□□ -1.99
BRO1YPL084W RCO1Q04779 684 aa2.6□□□□□ -1.99
BRO1YPL084W VIP1Q06685 1146 aaKnown RBP2.6□□□□□ -1.99
BRO1YPL084W PSK2Q08217 1101 aa2.6□□□□□ -1.99
BRO1YPL084W SKM1Q12469 655 aa2.6□□□□□ -1.99
BRO1YPL084W PCT1P13259 424 aa2.6□□□□□ -1.99
BRO1YPL084W SAN1P22470 610 aa2.6□□□□□ -1.99
BRO1YPL084W MAK32P23060 363 aa2.6□□□□□ -1.99
BRO1YPL084W ALY1P36117 915 aa2.6□□□□□ -1.99
BRO1YPL084W FTH1P38310 465 aa2.6□□□□□ -1.99
BRO1YPL084W FMP10P40098 244 aa2.6□□□□□ -1.99
BRO1YPL084W SIP4P46954 829 aa2.6□□□□□ -1.99
BRO1YPL084W YPR003CP53394 754 aa2.6□□□□□ -1.99
BRO1YPL084W YNR061CP53747 219 aa2.6□□□□□ -1.99
BRO1YPL084W SPN1Q06505 410 aaPredicted RBP2.6□□□□□ -1.99
BRO1YPL084W SUI3P09064 285 aaKnown RBP2.59□□□□□ -1.99
BRO1YPL084W CDC16P09798 840 aa2.59□□□□□ -1.99
BRO1YPL084W CIN1P40987 1014 aa2.59□□□□□ -1.99
BRO1YPL084W IME4P41833 600 aa2.59□□□□□ -1.99
BRO1YPL084W SWP82P43554 623 aa2.59□□□□□ -1.99
BRO1YPL084W YRB30P53107 440 aaPredicted RBP2.59□□□□□ -1.99
BRO1YPL084W SNU56Q03782 492 aaKnown RBP2.59□□□□□ -1.99
BRO1YPL084W TPO3Q06451 622 aa2.59□□□□□ -1.99
BRO1YPL084W BSP1Q06604 576 aa2.59□□□□□ -1.99
BRO1YPL084W ENT4Q07872 247 aa2.59□□□□□ -1.99
BRO1YPL084W LYS21Q12122 440 aaKnown RBP2.59□□□□□ -1.99
BRO1YPL084W SRP54P20424 541 aaKnown RBP2.59□□□□□ -2
BRO1YPL084W NUP1P20676 1076 aa2.59□□□□□ -2
BRO1YPL084W CDC15P27636 974 aa2.59□□□□□ -2
BRO1YPL084W ERV46P39727 415 aa2.59□□□□□ -2
BRO1YPL084W MUB1Q03162 620 aa2.59□□□□□ -2
BRO1YPL084W YLR111WQ12528 110 aa2.59□□□□□ -2
BRO1YPL084W CDC24P11433 854 aaPredicted RBP2.58□□□□□ -2
BRO1YPL084W AAC3P18238 307 aa2.58□□□□□ -2
BRO1YPL084W PAH1P32567 862 aa2.58□□□□□ -2
BRO1YPL084W CUE2P36075 443 aaKnown RBP2.58□□□□□ -2
BRO1YPL084W NTR2P36118 322 aaPredicted RBP2.58□□□□□ -2
BRO1YPL084W ESL2P36168 1195 aa2.58□□□□□ -2
BRO1YPL084W UBP13P38187 747 aa2.58□□□□□ -2
BRO1YPL084W ASG1P40467 964 aa2.58□□□□□ -2
BRO1YPL084W PIL1P53252 339 aaKnown RBP2.58□□□□□ -2
BRO1YPL084W RAD30Q04049 632 aa2.58□□□□□ -2
BRO1YPL084W COG4Q06096 861 aa2.58□□□□□ -2
BRO1YPL084W THI3Q07471 609 aa2.58□□□□□ -2
BRO1YPL084W GPN2Q08726 347 aaPredicted RBP2.58□□□□□ -2
BRO1YPL084W FRE7Q12333 620 aa2.58□□□□□ -2
BRO1YPL084W YOR111WQ99210 232 aa2.58□□□□□ -2
BRO1YPL084W APN1P22936 367 aa2.58□□□□□ -2
BRO1YPL084W ADE17P38009 592 aaKnown RBP2.58□□□□□ -2
BRO1YPL084W SLZ1P40167 298 aa2.58□□□□□ -2
BRO1YPL084W ARC1P46672 376 aaKnown RBP2.58□□□□□ -2
BRO1YPL084W UPF3P48412 387 aaKnown RBP2.58□□□□□ -2
BRO1YPL084W BPL1P48445 690 aaPredicted RBP2.58□□□□□ -2
BRO1YPL084W LGE1Q02796 332 aaKnown RBP2.58□□□□□ -2
BRO1YPL084W RSM28Q03430 361 aa2.58□□□□□ -2
BRO1YPL084W TAD3Q9URQ3 322 aa2.58□□□□□ -2
BRO1YPL084W CET1O13297 549 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms